TomoSeq data search

Data search

Results for MligTC455_33318

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33318

175

3.64

Mlig455_069800

Neo: -

Age: Up-Down-Up

CASK

Mlig455_069800 {REF} {Length: 4976} {Pfam: Guanylate kinase [PF00625.23, score=193.4]; PDZ domain [PF00595.26, score=56.0]; L27 domain [PF02828.18, score=39.9]; Variant SH3 domain [PF07653.19, score=25.1]; SH3 domain [PF00018.30, score=22.4]; PDZ domain [PF17820.3, score=21.3]; PDZ domain [PF13180.8, score=19.3]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [Score=614, Expect=0.0]} {Dmel: FBgn0013759, CASK, [RH, Score=573, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [RH, Score=535, Expect=2e-178]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [Score=694, Expect=0.0]} {RNA1509_30764} {RNA1310_4720.1} {RNA815_18816}

Cumulative graph for MligTC455_33318

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.343	2.229	0.23813	0.88339
RegionR2	0.908	2.229	0.39809	0.79243
RegionR3	0.329	2.229	0.70833	1.00000
RegionR4	-0.002	2.229	0.85823	1.00000
RegionR5	-1.283	2.229	0.99406	1.00000
RegionR6	0.478	2.229	0.61959	1.00000
RegionR7	2.246	2.229	0.01036	0.17498
RegionR8	2.667	2.229	0.00948	0.18319

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.268	2.229	0.99997	1.00000
RegenerationR2	-0.473	2.229	0.48285	0.86452
RegenerationR3	-0.843	2.229	0.29266	0.72489
RegenerationR4	-0.813	2.229	0.29816	0.74045
RegenerationR5	0.033	2.229	0.95823	1.00000
RegenerationR6	-0.3	2.229	0.70805	0.92906
RegenerationBL	-2.458	2.229	0.01710	0.13939
RegenerationTP	-1.358	2.229	0.10888	0.50880

Genes with expression patterns similar to MligTC455_33318

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33318	175	3.64	Mlig455_069800	Neo: - Age: Up-Down-Up	CASK	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_069800 {REF} {Length: 4976} {Pfam: Guanylate kinase [PF00625.23, score=193.4]; PDZ domain [PF00595.26, score=56.0]; L27 domain [PF02828.18, score=39.9]; Variant SH3 domain [PF07653.19, score=25.1]; SH3 domain [PF00018.30, score=22.4]; PDZ domain [PF17820.3, score=21.3]; PDZ domain [PF13180.8, score=19.3]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [Score=614, Expect=0.0]} {Dmel: FBgn0013759, CASK, [RH, Score=573, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [RH, Score=535, Expect=2e-178]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [Score=694, Expect=0.0]} {RNA1509_30764} {RNA1310_4720.1} {RNA815_18816}
2.	MligTC455_53269	270	5.63	Mlig455_047825, Mlig455_047897, Mlig455_047982	Neo: - Age: Up-Down-Down Region-enriched R8: 3.499/0.01025 Region-enriched R7: 3.317/0.00051	SESTD1	1.717	0.760	-	0.957	-	-	-	Mlig455_047825 {REF} {Length: 3780} {Human: ENSG00000187231, SESTD1, SEC14 and spectrin domain containing 1, [Score=57.4, Expect=1e-07]} {Mouse: ENSMUSG00000042272, Sestd1, SEC14 and spectrin domains 1, [Score=58.2, Expect=4e-08]} {Smed: dd_Smed_v6_12952_0_1, dd_Smed_v6_12952_0_1, [Score=112, Expect=2e-25]} {RNA1509_22628} {RNA1310_17693} {RNA815_10089} Mlig455_047897 {REF} {Length: 4600} {Human: ENSG00000187231, SESTD1, SEC14 and spectrin domain containing 1, [Score=58.5, Expect=6e-08]} {Mouse: ENSMUSG00000042272, Sestd1, SEC14 and spectrin domains 1, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_12952_0_1, dd_Smed_v6_12952_0_1, [Score=115, Expect=3e-26]} {RNA1509_22628} {RNA1310_17693} {RNA815_10089} Mlig455_047982 {REF} {Length: 3882} {Human: ENSG00000187231, SESTD1, SEC14 and spectrin domain containing 1, [Score=56.6, Expect=2e-07]} {Mouse: ENSMUSG00000042272, Sestd1, SEC14 and spectrin domains 1, [Score=57.4, Expect=9e-08]} {Smed: dd_Smed_v6_12952_0_1, dd_Smed_v6_12952_0_1, [Score=113, Expect=2e-25]} {RNA1509_22628} {RNA1310_17693} {RNA815_10089}
3.	MligTC455_20518	46	0.97	Mlig455_061260	Neo: - Age: -		1.67	0.708	-	-	-	-	0.962	Mlig455_061260 {REF} {Length: 2941} {tRNA: Ala(CGC), score=68.6} {RNA1509_34079} {RNA1310_46597} {RNA815_18160}
4.	MligTC455_50601	21	0.44	Mlig455_018462	Neo: - Age: -		0.976	-	-	-	0.976	-	-	Mlig455_018462 {REF} {Length: 2878} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=164.0]} {Smed: dd_Smed_v6_37545_0_1, dd_Smed_v6_37545_0_1, [Score=117, Expect=1e-27]} {RNA1310_8235} {RNA815_10456.1}
5.	MligTC455_32612	55	1.15	Mlig455_015630	Neo: - Age: - Region-enriched R2: 5.626/0.02523	ARX	0.972	-	-	-	0.972	-	-	Mlig455_015630 {REF} {Length: 2012} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=133, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=118, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=119, Expect=3e-33]} {RNA1310_42333.1} {RNA815_48205}
6.	MligTC455_52866	78	1.63	Mlig455_023043, Mlig455_029545	Neo: - Age: - Region-enriched R4: 4.760/0.04612		0.972	-	-	-	-	0.972	-	Mlig455_023043 {REF} {Length: 2257} {NoTransDecoderORF} {RNA1509_35052} {RNA1310_43347} {RNA815_31290} Mlig455_029545 {REF} {Length: 2893} {NoTransDecoderORF} {RNA1509_46791} {RNA1310_43347} {RNA815_59260}
7.	MligTC455_24941	188	3.92	Mlig455_011277	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_011277 {REF} {Length: 236} {NoTransDecoderORF} {RNA1509_25592}
8.	MligTC455_24310	169	3.52	Mlig455_044934	Neo: - Age: - Region-enriched R2: 3.442/0.01506	SLC16A12	0.965	-	-	-	0.965	-	-	Mlig455_044934 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=125.7]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [RH, Score=186, Expect=1e-52]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [RH, Score=187, Expect=2e-53]} {Dmel: FBgn0033095, CG3409, [Score=138, Expect=1e-34]} {Celegans: WBGene00021227, mct-1, MonoCarboxylate Transporter family, [Score=117, Expect=3e-28]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=123, Expect=3e-30]} {RNA1509_33089} {RNA1310_9979} {RNA815_6321}
9.	MligTC455_26581	71	1.48	Mlig455_013862	Neo: - Age: -	ALKBH3	0.963	-	-	-	0.963	-	-	Mlig455_013862 {REF} {Length: 4239} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=158.2]; 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=89.5]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=115, Expect=6e-28]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=51.2, Expect=5e-06]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=105, Expect=2e-24]} {RNA1509_29984} {RNA1310_8204} {RNA815_38513}
10.	MligTC455_47108	471	9.81	Mlig455_055357, Mlig455_055414	Neo: - Age: - Region-enriched R6: 2.574/0.00468		0.961	-	-	-	0.961	-	-	Mlig455_055357 {REF} {Length: 972} {RNA1509_22152} {RNA1310_38930.1} {RNA815_40776} Mlig455_055414 {REF} {Length: 940} {RNA1509_22152} {RNA1310_38930.1, RNA1509_22152} {RNA1509_22152, RNA815_40776}
11.	MligTC455_23856	36	0.74	Mlig455_011275	Neo: - Age: -	KCNN2	0.953	-	-	-	0.953	-	-	Mlig455_011275 {REF} {Length: 5211} {Pfam: Calcium-activated SK potassium channel [PF03530.16, score=145.7]; Calmodulin binding domain [PF02888.18, score=113.6]; Ion channel [PF07885.18, score=52.3]} {Human: ENSG00000080709, KCNN2, potassium calcium-activated channel subfamily N member 2, [RH, Score=538, Expect=0.0]; ENSG00000143603, KCNN3, potassium calcium-activated channel subfamily N member 3, [RH, Score=530, Expect=0.0]; ENSG00000105642, KCNN1, potassium calcium-activated channel subfamily N member 1, [RH, Score=515, Expect=2e-178]} {Mouse: ENSMUSG00000054477, Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, [RH, Score=539, Expect=0.0]; ENSMUSG00000000794, Kcnn3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0029761, SK, small conductance calcium-activated potassium channel, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00008570, kcnl-2, KCNL-2 variant; KCNN (Potassium K ChaNNel, calcium activated)-Like, [RH, Score=423, Expect=2e-140]} {Smed: dd_Smed_v6_14006_0_1, dd_Smed_v6_14006_0_1, [RH, Score=540, Expect=0.0]} {RNA1509_39273} {RNA1310_12409} {RNA815_5551}
12.	MligTC455_41180	128	2.66	Mlig455_048529	Neo: - Age: - Region-enriched R2: 3.286/0.00629		0.953	-	-	-	-	-	0.953	Mlig455_048529 {REF} {Length: 672} {NoTransDecoderORF} {RNA1310_69878} {RNA815_35715}
13.	MligTC455_46543	178	3.7	Mlig455_000344, Mlig455_067946	Neo: - Age: - Region-specific R2: 6.098 Region-enriched R2: 6.851/0.00000		0.953	-	-	-	0.953	-	-	Mlig455_000344 {REF} {Length: 1920} {RNA1310_82457} {RNA815_33120} Mlig455_067946 {REF} {Length: 1217} {RNA1310_99435}
14.	MligTC455_39371	221	4.6	Mlig455_068978	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.390	ABCG4	0.95	-	-	-	0.950	-	-	Mlig455_068978 {REF} {Length: 5136} {TRANSSPLICED} {Pfam: ABC-2 type transporter [PF01061.26, score=156.2]; ABC transporter [PF00005.29, score=100.1]; ABC-2 type transporter [PF19055.2, score=74.6]; RsgA GTPase [PF03193.18, score=25.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=24.2]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=18.8]} {Human: ENSG00000172350, ABCG4, ATP binding cassette subfamily G member 4, [RH, Score=647, Expect=0.0]; ENSG00000160179, ABCG1, ATP binding cassette subfamily G member 1, [RH, Score=641, Expect=0.0]} {Mouse: ENSMUSG00000032131, Abcg4, ATP binding cassette subfamily G member 4, [RH, Score=657, Expect=0.0]; ENSMUSG00000024030, Abcg1, ATP binding cassette subfamily G member 1, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0020762, Atet, ABC transporter expressed in trachea, [RH, Score=610, Expect=0.0]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [RH, Score=272, Expect=1e-81]} {Smed: dd_Smed_v6_4142_0_1, dd_Smed_v6_4142_0_1, [RH, Score=413, Expect=1e-139]} {RNA1509_38106} {RNA1310_4533, RNA1509_38106} {RNA1509_38106, RNA815_2836}

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