TomoSeq data search

Data search

Results for MligTC455_33350

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33350	100	2.07	Mlig455_064065	Neo: - Age: -		Mlig455_064065 {REF} {Length: 1116} {RNA1509_52037} {RNA1310_66472} {RNA815_23533}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_33350

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	3.677	1.366	0.05420	0.54405
RegionR2	-0.483	1.366	0.62321	0.96613
RegionR3	-0.256	1.366	0.67032	1.00000
RegionR4	0.101	1.366	0.52095	0.84577
RegionR5	-1.502	1.366	0.16315	0.42675
RegionR6	-0.61	1.366	0.31871	0.90721
RegionR7	-1.626	1.366	0.03461	0.35403
RegionR8	0.699	1.366	0.59204	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.032	1.366	0.60584	1.00000
RegenerationR2	-2.768	1.366	0.18297	0.62566
RegenerationR3	-0.215	1.366	0.60950	0.91239
RegenerationR4	-0.901	1.366	0.85166	1.00000
RegenerationR5	0.494	1.366	0.30337	0.73056
RegenerationR6	-2.103	1.366	0.46405	0.78047
RegenerationBL	-2.096	1.366	0.57352	0.92661
RegenerationTP	-0.345	1.366	0.43963	0.85987

Genes with expression patterns similar to MligTC455_33350

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33350	100	2.07	Mlig455_064065	Neo: - Age: -		3	1.000	1.000	-	-	-	1.000	Mlig455_064065 {REF} {Length: 1116} {RNA1509_52037} {RNA1310_66472} {RNA815_23533}
2.	MligTC455_33351	132	2.75	Mlig455_064999	Neo: - Age: Up-Down-Up	TRPM3	2.771	0.970	1.000	-	-	-	0.801	Mlig455_064999 {REF} {Length: 9865} {Pfam: SLOG in TRPM [PF18139.3, score=151.7]; Ion transport protein [PF00520.33, score=58.8]; SLOG in TRPM, prokaryote [PF18171.3, score=51.5]; Ankyrin repeats (3 copies) [PF12796.9, score=47.7]; Ankyrin repeat [PF00023.32, score=36.7]; Ankyrin repeats (many copies) [PF13637.8, score=33.2]; Ankyrin repeat [PF13606.8, score=28.1]; Ankyrin repeats (many copies) [PF13857.8, score=26.9]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=251, Expect=2e-66]; ENSG00000070985, TRPM5, transient receptor potential cation channel subfamily M member 5, [Score=248, Expect=3e-66]; ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=247, Expect=3e-65]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=241, Expect=2e-63]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=241, Expect=2e-63]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=257, Expect=3e-68]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=229, Expect=8e-60]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=203, Expect=5e-52]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=619, Expect=0.0]} {RNA1509_14127, RNA1509_52037} {RNA1310_477.1, RNA1509_14127, RNA1509_52037} {RNA1509_14127, RNA1509_52037, RNA815_12146}
3.	MligTC455_39483	32	0.67	Mlig455_039159, Mlig455_051657	Neo: - Age: -	DRD5	0.962	-	-	-	-	-	0.962	Mlig455_039159 {REF} {Length: 924} Mlig455_051657 {REF} {Length: 3345} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=201.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.9]} {Human: ENSG00000169676, DRD5, dopamine receptor D5, [RH, Score=195, Expect=1e-56]} {Mouse: ENSMUSG00000039358, Drd5, dopamine receptor D5, [Score=202, Expect=2e-59]; ENSMUSG00000034987, Hrh2, histamine receptor H2, [Score=196, Expect=1e-58]} {Dmel: FBgn0038980, Octbeta1R, Octopamine beta1 receptor, [Score=192, Expect=1e-56]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=170, Expect=2e-48]} {Smed: dd_Smed_v6_26479_0_1, dd_Smed_v6_26479_0_1, [Score=192, Expect=4e-57]} {RNA1509_55535} {RNA1310_37735} {RNA815_7470.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33350

100

2.07

Mlig455_064065

Neo: -

Age: -

1.000

Mlig455_064065 {REF} {Length: 1116} {RNA1509_52037} {RNA1310_66472} {RNA815_23533}

MligTC455_33351

132

2.75

Mlig455_064999

Neo: -

Age: Up-Down-Up

TRPM3

2.771

0.970

1.000

0.801

Mlig455_064999 {REF} {Length: 9865} {Pfam: SLOG in TRPM [PF18139.3, score=151.7]; Ion transport protein [PF00520.33, score=58.8]; SLOG in TRPM, prokaryote [PF18171.3, score=51.5]; Ankyrin repeats (3 copies) [PF12796.9, score=47.7]; Ankyrin repeat [PF00023.32, score=36.7]; Ankyrin repeats (many copies) [PF13637.8, score=33.2]; Ankyrin repeat [PF13606.8, score=28.1]; Ankyrin repeats (many copies) [PF13857.8, score=26.9]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=251, Expect=2e-66]; ENSG00000070985, TRPM5, transient receptor potential cation channel subfamily M member 5, [Score=248, Expect=3e-66]; ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=247, Expect=3e-65]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=241, Expect=2e-63]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=241, Expect=2e-63]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=257, Expect=3e-68]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=229, Expect=8e-60]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=203, Expect=5e-52]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=619, Expect=0.0]} {RNA1509_14127, RNA1509_52037} {RNA1310_477.1, RNA1509_14127, RNA1509_52037} {RNA1509_14127, RNA1509_52037, RNA815_12146}

MligTC455_39483

0.67

Mlig455_039159, Mlig455_051657

Neo: -

Age: -

DRD5

0.962

Mlig455_039159 {REF} {Length: 924}

Mlig455_051657 {REF} {Length: 3345} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=201.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.9]} {Human: ENSG00000169676, DRD5, dopamine receptor D5, [RH, Score=195, Expect=1e-56]} {Mouse: ENSMUSG00000039358, Drd5, dopamine receptor D5, [Score=202, Expect=2e-59]; ENSMUSG00000034987, Hrh2, histamine receptor H2, [Score=196, Expect=1e-58]} {Dmel: FBgn0038980, Octbeta1R, Octopamine beta1 receptor, [Score=192, Expect=1e-56]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=170, Expect=2e-48]} {Smed: dd_Smed_v6_26479_0_1, dd_Smed_v6_26479_0_1, [Score=192, Expect=4e-57]} {RNA1509_55535} {RNA1310_37735} {RNA815_7470.1}