TomoSeq data search

Data search

Results for MligTC455_39483

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39483

32

0.67

Mlig455_039159, Mlig455_051657

Neo: -

Age: -

DRD5

Mlig455_039159 {REF} {Length: 924}

Mlig455_051657 {REF} {Length: 3345} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=201.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.9]} {Human: ENSG00000169676, DRD5, dopamine receptor D5, [RH, Score=195, Expect=1e-56]} {Mouse: ENSMUSG00000039358, Drd5, dopamine receptor D5, [Score=202, Expect=2e-59]; ENSMUSG00000034987, Hrh2, histamine receptor H2, [Score=196, Expect=1e-58]} {Dmel: FBgn0038980, Octbeta1R, Octopamine beta1 receptor, [Score=192, Expect=1e-56]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=170, Expect=2e-48]} {Smed: dd_Smed_v6_26479_0_1, dd_Smed_v6_26479_0_1, [Score=192, Expect=4e-57]} {RNA1509_55535} {RNA1310_37735} {RNA815_7470.1}

Cumulative graph for MligTC455_39483

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.143	0.767	0.99982	1.00000
RegionR2	0.027	0.767	0.87505	1.00000
RegionR3	0.547	0.767	0.60302	1.00000
RegionR4	-0.429	0.767	1.00000	1.00000
RegionR5	-2.226	0.767	0.99997	1.00000
RegionR6	1.308	0.767	0.45256	1.00000
RegionR7	3.137	0.767	0.19028	0.79403
RegionR8	-2.221	0.767	0.99975	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.424	0.767	0.99988	1.00000
RegenerationR2	-3.476	0.767	0.23393	0.68145
RegenerationR3	-1.215	0.767	0.60463	0.90987
RegenerationR4	-1.386	0.767	0.99978	1.00000
RegenerationR5	1.188	0.767	0.55545	0.88862
RegenerationR6	-4.149	0.767	0.21178	0.55536
RegenerationBL	-3.105	0.767	0.99864	1.00000
RegenerationTP	-0.005	0.767	0.92819	1.00000

Genes with expression patterns similar to MligTC455_39483

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39483	32	0.67	Mlig455_039159, Mlig455_051657	Neo: - Age: -	DRD5	2	-	-	1.000	-	-	1.000	Mlig455_039159 {REF} {Length: 924} Mlig455_051657 {REF} {Length: 3345} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=201.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.9]} {Human: ENSG00000169676, DRD5, dopamine receptor D5, [RH, Score=195, Expect=1e-56]} {Mouse: ENSMUSG00000039358, Drd5, dopamine receptor D5, [Score=202, Expect=2e-59]; ENSMUSG00000034987, Hrh2, histamine receptor H2, [Score=196, Expect=1e-58]} {Dmel: FBgn0038980, Octbeta1R, Octopamine beta1 receptor, [Score=192, Expect=1e-56]} {Celegans: WBGene00001052, dop-1, DOPamine receptor, [Score=170, Expect=2e-48]} {Smed: dd_Smed_v6_26479_0_1, dd_Smed_v6_26479_0_1, [Score=192, Expect=4e-57]} {RNA1509_55535} {RNA1310_37735} {RNA815_7470.1}
2.	MligTC455_52432	75	1.56	Mlig455_019213	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.520		1.789	-	-	0.993	-	-	0.796	Mlig455_019213 {REF} {Length: 3040} {RNA1310_29981} {RNA815_46279}
3.	MligTC455_14372	41	0.84	Mlig455_048281	Neo: - Age: -		0.984	-	-	0.984	-	-	-	Mlig455_048281 {REF} {Length: 1396} {Pfam: Sulfotransferase domain [PF19798.1, score=52.4]} {RNA1310_42847} {RNA815_35707}
4.	MligTC455_23547	43	0.89	Mlig455_025198	Neo: - Age: -		0.982	-	-	0.982	-	-	-	Mlig455_025198 {REF} {Length: 1912} {RNA1310_62305} {RNA815_43403}
5.	MligTC455_28294	127	2.64	Mlig455_006642	Neo: - Age: Up-Down-Up	ANKRD17	0.979	-	-	0.979	-	-	-	Mlig455_006642 {REF} {Length: 7026} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=380.4]; Ankyrin repeats (many copies) [PF13637.8, score=222.9]; Ankyrin repeat [PF13606.8, score=165.6]; Ankyrin repeats (many copies) [PF13857.8, score=142.3]; Ankyrin repeat [PF00023.32, score=136.2]; Nucleotide-Binding Domain 94 of RH [PF16830.7, score=23.4]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=139, Expect=7e-32]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=139, Expect=3e-32]} {Dmel: FBgn0039590, CG10011, [Score=90.5, Expect=1e-17]} {Celegans: WBGene00012124, T28D6.4, [Score=84.7, Expect=5e-16]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=106, Expect=9e-23]} {RNA1509_44391} {RNA1310_30754} {RNA815_10474.1}
6.	MligTC455_18377	26	0.54	Mlig455_041627	Neo: - Age: -		0.972	-	-	0.972	-	-	-	Mlig455_041627 {REF} {Length: 2273} {Pfam: Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 [PF15807.7, score=20.3]} {RNA1310_89162} {RNA815_48416}
7.	MligTC455_29832	21	0.43	Mlig455_036135	Neo: - Age: -		0.966	-	-	0.966	-	-	-	Mlig455_036135 {REF} {Length: 1538} {NoTransDecoderORF} {RNA1310_33964.1} {RNA815_32063.1}
8.	MligTC455_50731	121	2.51	Mlig455_065010	Neo: - Age: Down-Up-Down Region-enriched R7: 3.709/0.00994	TRABD2B	0.963	-	-	0.963	-	-	-	Mlig455_065010 {REF} {Length: 1805} {Pfam: TraB/PrgY/gumN family [PF01963.19, score=145.5]} {Human: ENSG00000269113, TRABD2B, TraB domain containing 2B, [RH, Score=155, Expect=3e-41]; ENSG00000186854, TRABD2A, TraB domain containing 2A, [RH, Score=153, Expect=7e-42]} {Mouse: ENSMUSG00000070867, Trabd2b, TraB domain containing 2B, [RH, Score=161, Expect=1e-43]} {Celegans: WBGene00007351, C05G5.5, Metalloprotease TIKI homolog, [RH, Score=138, Expect=3e-36]} {RNA1310_36764} {RNA815_32656}
9.	MligTC455_33350	100	2.07	Mlig455_064065	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_064065 {REF} {Length: 1116} {RNA1509_52037} {RNA1310_66472} {RNA815_23533}
10.	MligTC455_37879	44	0.92	Mlig455_043317	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_043317 {REF} {Length: 2821} {RNA1310_10915} {RNA815_31437}
11.	MligTC455_25776	220	4.59	Mlig455_000479, Mlig455_024867	Neo: - Age: -		0.96	-	-	0.960	-	-	-	Mlig455_000479 {REF} {Length: 548} {Pfam: PHD-finger [PF00628.31, score=27.6]} {RNA1310_79789} Mlig455_024867 {REF} {Length: 1776} {Pfam: PHD-finger [PF00628.31, score=25.7]} {RNA1310_46465}
12.	MligTC455_25169	62	1.29	Mlig455_017959	Neo: Irradiation Age: -	SPECC1L	0.956	-	-	0.956	-	-	-	Mlig455_017959 {REF} {Length: 4845} {TRANSSPLICED} {Pfam: Calponin homology (CH) domain [PF00307.33, score=68.3]; CAMSAP CH domain [PF11971.10, score=22.3]} {Human: ENSG00000100014, SPECC1L, sperm antigen with calponin homology and coiled-coil domains 1 like, [RH, Score=264, Expect=5e-73]} {Mouse: ENSMUSG00000033444, Specc1l, sperm antigen with calponin homology and coiled-coil domains 1-like, [RH, Score=261, Expect=3e-72]} {Dmel: FBgn0025633, CG13366, [RH, Score=187, Expect=3e-48]} {Celegans: WBGene00020530, T15B12.1, [Score=128, Expect=3e-31]} {Smed: dd_Smed_v6_7845_0_1, dd_Smed_v6_7845_0_1, [Score=159, Expect=7e-40]} {RNA1509_39130, RNA1509_7795} {RNA1310_10182.1, RNA1509_39130, RNA1509_7795} {RNA1509_39130, RNA1509_7795, RNA815_11375}
13.	MligTC455_40459	62	1.3	Mlig455_053585	Neo: - Age: Up-Down-Down	NR2C2	0.955	-	-	0.955	-	-	-	Mlig455_053585 {REF} {Length: 5009} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=47.4]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=213, Expect=4e-59]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [RH, Score=214, Expect=2e-59]} {Dmel: FBgn0015239, Hr78, Hormone-receptor-like in 78, [RH, Score=140, Expect=3e-34]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [RH, Score=144, Expect=1e-35]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [RH, Score=126, Expect=1e-30]} {RNA1509_43216} {RNA1310_5171.1} {RNA815_17828}
14.	MligTC455_21953	256	5.34	Mlig455_008589, Mlig455_008601	Neo: - Age: logFC(26M/2M)=-0.594 Region-enriched R7: 2.530/0.04802		0.953	-	-	0.953	-	-	-	Mlig455_008589 {REF} {Length: 4004} {Pfam: Major Facilitator Superfamily [PF07690.18, score=54.4]; Nodulin-like [PF06813.15, score=49.2]} {RNA1509_31992} {RNA1310_8513} {RNA815_2876.1} Mlig455_008601 {REF} {Length: 2561} {Pfam: Major Facilitator Superfamily [PF07690.18, score=55.2]; Nodulin-like [PF06813.15, score=36.7]} {RNA1509_31992} {RNA1310_8513} {RNA815_2876.1}
15.	MligTC455_41169	31	0.65	Mlig455_047881	Neo: - Age: -		0.951	-	-	0.951	-	-	-	Mlig455_047881 {REF} {Length: 686} {NoTransDecoderORF} {RNA1310_34768.1}

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