TomoSeq data search

Data search

Results for MligTC455_33378

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33378

579

12.07

Mlig455_013508

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.320

Region-enriched R2: 2.375/0.00048

DNAH11

Mlig455_013508 {REF} {Length: 18482} {TRANSSPLICED} {Pfam: Dynein heavy chain, N-terminal region 1 [PF08385.14, score=331.7]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=259.1]; P-loop containing dynein motor region [PF12775.9, score=116.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=66.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=37.3]; AAA domain [PF13401.8, score=24.8]; AAA ATPase domain [PF13191.8, score=21.7]; AAA domain [PF13173.8, score=21.4]; P-loop containing region of AAA domain [PF13555.8, score=20.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.1]; ABC transporter [PF00005.29, score=19.9]} {Human: ENSG00000105877, DNAH11, dynein axonemal heavy chain 11, [Score=321, Expect=8e-87]} {Mouse: ENSMUSG00000018581, Dnah11, dynein, axonemal, heavy chain 11, [Score=317, Expect=7e-86]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=214, Expect=9e-55]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=99.0, Expect=6e-20]} {Smed: dd_Smed_v6_10425_0_1, dd_Smed_v6_10425_0_1, [RH, Score=529, Expect=2e-150]} {RNA1509_1016, RNA1509_42828, RNA1509_6223} {RNA1310_13, RNA1509_1016, RNA1509_42828, RNA1509_6223} {RNA1509_1016, RNA1509_42828, RNA1509_6223, RNA815_25.1}

Cumulative graph for MligTC455_33378

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.089	3.875	0.12263	0.71649
RegionR2	2.375	3.875	0.00001	0.00048
RegionR3	0.721	3.875	0.06831	0.46201
RegionR4	-1.498	3.875	0.00791	0.05115
RegionR5	-0.728	3.875	0.08628	0.27580
RegionR6	-0.381	3.875	0.40773	0.97705
RegionR7	0.029	3.875	0.95631	1.00000
RegionR8	1.57	3.875	0.00844	0.17086

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.538	3.875	0.05511	0.71346
RegenerationR2	0.97	3.875	0.00904	0.15170
RegenerationR3	0.581	3.875	0.22083	0.65686
RegenerationR4	1.557	3.875	0.00305	0.07297
RegenerationR5	0.812	3.875	0.08519	0.45007
RegenerationR6	0.886	3.875	0.10910	0.40854
RegenerationBL	1.74	3.875	0.00126	0.02661
RegenerationTP	0.563	3.875	0.35382	0.79527

Genes with expression patterns similar to MligTC455_33378

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33378	579	12.07	Mlig455_013508	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.320 Region-enriched R2: 2.375/0.00048	DNAH11	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013508 {REF} {Length: 18482} {TRANSSPLICED} {Pfam: Dynein heavy chain, N-terminal region 1 [PF08385.14, score=331.7]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=259.1]; P-loop containing dynein motor region [PF12775.9, score=116.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=66.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=37.3]; AAA domain [PF13401.8, score=24.8]; AAA ATPase domain [PF13191.8, score=21.7]; AAA domain [PF13173.8, score=21.4]; P-loop containing region of AAA domain [PF13555.8, score=20.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.1]; ABC transporter [PF00005.29, score=19.9]} {Human: ENSG00000105877, DNAH11, dynein axonemal heavy chain 11, [Score=321, Expect=8e-87]} {Mouse: ENSMUSG00000018581, Dnah11, dynein, axonemal, heavy chain 11, [Score=317, Expect=7e-86]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=214, Expect=9e-55]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=99.0, Expect=6e-20]} {Smed: dd_Smed_v6_10425_0_1, dd_Smed_v6_10425_0_1, [RH, Score=529, Expect=2e-150]} {RNA1509_1016, RNA1509_42828, RNA1509_6223} {RNA1310_13, RNA1509_1016, RNA1509_42828, RNA1509_6223} {RNA1509_1016, RNA1509_42828, RNA1509_6223, RNA815_25.1}
2.	MligTC455_40316	727	15.15	Mlig455_044270	Neo: - Age: Up-Down-Down	DNAH3	2.676	-	0.880	-	0.960	-	0.836	Mlig455_044270 {REF} {Length: 14059} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=512.5]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=451.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=365.6]; P-loop containing dynein motor region D4 [PF12780.9, score=340.7]; ATP-binding dynein motor region [PF12781.9, score=296.8]; P-loop containing dynein motor region [PF12775.9, score=216.9]; Microtubule-binding stalk of dynein motor [PF12777.9, score=170.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=170.2]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=133.7]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=69.0]; AAA+ lid domain [PF17857.3, score=45.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=31.4]; AAA ATPase domain [PF13191.8, score=30.3]; AAA domain [PF13401.8, score=28.6]} {Human: ENSG00000158486, DNAH3, dynein axonemal heavy chain 3, [Score=3809, Expect=0.0]} {Mouse: ENSMUSG00000052273, Dnah3, dynein, axonemal, heavy chain 3, [Score=3845, Expect=0.0]} {Dmel: FBgn0035581, Dnah3, dynein, axonemal, heavy chain 3, [Score=3159, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1231, Expect=0.0]} {Smed: dd_Smed_v6_6941_0_1, dd_Smed_v6_6941_0_1, [Score=3395, Expect=0.0]} {RNA1509_2566} {RNA1310_85, RNA1509_2566} {RNA1509_2566, RNA815_37.1}
3.	MligTC455_49614	692	14.42	Mlig455_008153	Neo: - Age: logFC(26M/2M)=-0.516		2.631	-	-	-	0.912	0.755	0.964	Mlig455_008153 {REF} {Length: 2957} {Dmel: FBgn0053519, Unc-89, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_12629_0_1, dd_Smed_v6_12629_0_1, [RH, Score=220, Expect=1e-62]} {RNA1509_10730, RNA1509_23712} {RNA1310_6069.1, RNA1509_10730, RNA1509_23712} {RNA1509_10730, RNA1509_23712, RNA815_6292.1}
4.	MligTC455_43672	602	12.54	Mlig455_067100	Neo: - Age: -		1.763	-	0.807	-	-	-	0.956	Mlig455_067100 {REF} {Length: 2322} {Pfam: Family of unknown function (DUF6328) [PF19853.1, score=18.9]} {RNA1509_54455} {RNA1310_28362, RNA1509_54455} {RNA1509_54455, RNA815_15060}
5.	MligTC455_32419	319	6.65	Mlig455_013944	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.686	NWD2	1.746	-	-	-	0.965	-	0.781	Mlig455_013944 {REF} {Length: 3190} {TRANSSPLICED} {Pfam: Dpy-30 motif [PF05186.15, score=33.8]; AAA ATPase domain [PF13191.8, score=29.3]; NACHT domain [PF05729.14, score=19.8]; ATPase domain predominantly from Archaea [PF01637.20, score=19.1]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=130, Expect=2e-30]; ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=128, Expect=9e-30]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=127, Expect=2e-29]; ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=121, Expect=9e-28]} {Dmel: FBgn0038397, CG10185, [Score=193, Expect=6e-51]} {Celegans: WBGene00020254, T05C3.2, [Score=196, Expect=9e-52]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=83.2, Expect=3e-16]} {RNA1509_34526} {RNA1310_322} {RNA815_139.1}
6.	MligTC455_47331	542	11.29	Mlig455_025943	Neo: - Age: -		1.733	-	0.779	-	0.954	-	-	Mlig455_025943 {REF} {Length: 3709} {Pfam: Dynamin family [PF00350.25, score=74.4]; 50S ribosome-binding GTPase [PF01926.25, score=33.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.0]; Ras family [PF00071.24, score=19.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.1]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=165, Expect=6e-45]} {RNA1509_31736, RNA1509_36782} {RNA1310_3463.1, RNA1509_36782} {RNA1509_36782, RNA815_1104.2}
7.	MligTC455_41962	988	20.59	Mlig455_060348	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.332	PKP4	1.705	-	-	-	-	0.746	0.959	Mlig455_060348 {REF} {Length: 5964} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=42.4]} {Human: ENSG00000144283, PKP4, plakophilin 4, [Score=160, Expect=2e-39]; ENSG00000169862, CTNND2, catenin delta 2, [Score=154, Expect=2e-37]} {Mouse: ENSMUSG00000026991, Pkp4, plakophilin 4, [Score=163, Expect=2e-40]} {Dmel: FBgn0260799, p120ctn, Adherens junction protein p120, [Score=186, Expect=2e-48]} {Celegans: WBGene00002175, jac-1, Juxtamembrane domain-associated catenin, [Score=162, Expect=2e-40]} {Smed: dd_Smed_v6_6256_0_1, dd_Smed_v6_6256_0_1, [Score=125, Expect=3e-29]} {RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625} {RNA1310_1871, RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625} {RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625, RNA815_5226}
8.	MligTC455_52864	118	2.45	Mlig455_070404	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_070404 {REF} {Length: 475} {NoTransDecoderORF} {RNA1509_57987} {RNA1310_20286.1} {RNA815_21366}
9.	MligTC455_37751	204	4.25	Mlig455_014157	Neo: - Age: Up-Down-Down Region-enriched R2: 2.173/0.03490	NWD2	0.954	-	-	-	0.954	-	-	Mlig455_014157 {REF} {Length: 7240} {TRANSSPLICED} {Pfam: AAA ATPase domain [PF13191.8, score=40.0]; NACHT domain [PF05729.14, score=36.6]; Dpy-30 motif [PF05186.15, score=33.2]; AAA domain [PF13401.8, score=32.6]; Domain of unknown function (DUF4062) [PF13271.8, score=22.0]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=402, Expect=6e-114]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=395, Expect=8e-112]} {Dmel: FBgn0038397, CG10185, [Score=526, Expect=2e-156]} {Celegans: WBGene00020254, T05C3.2, [Score=521, Expect=2e-154]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=292, Expect=2e-79]} {RNA1509_7024} {RNA1310_383.1, RNA1509_7024} {RNA1509_7024, RNA815_188}
10.	MligTC455_44957	561	11.69	Mlig455_050270	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_050270 {REF} {Length: 5392} {RNA1509_11852} {RNA1310_1846.1} {RNA815_598}

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