TomoSeq data search

Data search

Results for MligTC455_41962

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41962

988

20.59

Mlig455_060348

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.332

PKP4

Mlig455_060348 {REF} {Length: 5964} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=42.4]} {Human: ENSG00000144283, PKP4, plakophilin 4, [Score=160, Expect=2e-39]; ENSG00000169862, CTNND2, catenin delta 2, [Score=154, Expect=2e-37]} {Mouse: ENSMUSG00000026991, Pkp4, plakophilin 4, [Score=163, Expect=2e-40]} {Dmel: FBgn0260799, p120ctn, Adherens junction protein p120, [Score=186, Expect=2e-48]} {Celegans: WBGene00002175, jac-1, Juxtamembrane domain-associated catenin, [Score=162, Expect=2e-40]} {Smed: dd_Smed_v6_6256_0_1, dd_Smed_v6_6256_0_1, [Score=125, Expect=3e-29]} {RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625} {RNA1310_1871, RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625} {RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625, RNA815_5226}

Cumulative graph for MligTC455_41962

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.726	4.6	0.43472	1.00000
RegionR2	0.3	4.6	0.42708	0.81763
RegionR3	-0.324	4.6	0.30942	0.84864
RegionR4	0.441	4.6	0.24916	0.54835
RegionR5	-1.047	4.6	0.00102	0.01035
RegionR6	-0.405	4.6	0.21479	0.79281
RegionR7	0.073	4.6	0.86003	1.00000
RegionR8	0.237	4.6	0.63383	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.91	4.6	0.49130	1.00000
RegenerationR2	0.62	4.6	0.04509	0.35111
RegenerationR3	0.54	4.6	0.14122	0.56730
RegenerationR4	-0.289	4.6	0.44408	0.83912
RegenerationR5	0.059	4.6	0.87417	1.00000
RegenerationR6	0.291	4.6	0.45132	0.77148
RegenerationBL	0.892	4.6	0.02567	0.17624
RegenerationTP	-0.478	4.6	0.31872	0.76414

Genes with expression patterns similar to MligTC455_41962

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41962	988	20.59	Mlig455_060348	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.332	PKP4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060348 {REF} {Length: 5964} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=42.4]} {Human: ENSG00000144283, PKP4, plakophilin 4, [Score=160, Expect=2e-39]; ENSG00000169862, CTNND2, catenin delta 2, [Score=154, Expect=2e-37]} {Mouse: ENSMUSG00000026991, Pkp4, plakophilin 4, [Score=163, Expect=2e-40]} {Dmel: FBgn0260799, p120ctn, Adherens junction protein p120, [Score=186, Expect=2e-48]} {Celegans: WBGene00002175, jac-1, Juxtamembrane domain-associated catenin, [Score=162, Expect=2e-40]} {Smed: dd_Smed_v6_6256_0_1, dd_Smed_v6_6256_0_1, [Score=125, Expect=3e-29]} {RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625} {RNA1310_1871, RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625} {RNA1509_25999, RNA1509_36938, RNA1509_46284, RNA1509_59052, RNA1509_7625, RNA815_5226}
2.	MligTC455_49513	233	4.85	Mlig455_022846	Neo: - Age: -	AGBL2	3.239	0.718	-	0.809	0.953	0.759	-	Mlig455_022846 {REF} {Length: 5485} {Pfam: Cytosolic carboxypeptidase N-terminal domain [PF18027.3, score=73.4]; Zinc carboxypeptidase [PF00246.26, score=69.4]} {Human: ENSG00000285501, AGBL2, ATP/GTP binding protein like 2, [RH, Score=598, Expect=0.0]; ENSG00000165923, AGBL2, ATP/GTP binding protein like 2, [RH, Score=598, Expect=0.0]; ENSG00000146856, AGBL3, ATP/GTP binding protein like 3, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000038836, Agbl3, ATP/GTP binding protein-like 3, [RH, Score=594, Expect=0.0]; ENSMUSG00000040812, Agbl2, ATP/GTP binding protein-like 2, [RH, Score=593, Expect=0.0]} {Dmel: FBgn0265726, Nna1, Nna1 carboxypeptidase, [RH, Score=581, Expect=0.0]} {Celegans: WBGene00018995, ccpp-1, Cytosolic carboxypeptidase 1, [Score=287, Expect=4e-81]} {Smed: dd_Smed_v6_13450_0_1, dd_Smed_v6_13450_0_1, [RH, Score=624, Expect=0.0]} {RNA1509_10895} {RNA1310_2786.1} {RNA815_1445.1}
3.	MligTC455_52238	282	5.87	Mlig455_029211	Neo: - Age: logFC(26M/2M)=-0.312	ABCG2	2.616	-	-	0.840	-	0.821	0.955	Mlig455_029211 {REF} {Length: 3240} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=80.5, Expect=3e-15]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=79.0, Expect=7e-15]} {Smed: dd_Smed_v6_4225_0_1, dd_Smed_v6_4225_0_1, [Score=108, Expect=2e-24]} {RNA1509_38878} {RNA1310_949.2} {RNA815_1895}
4.	MligTC455_19173	2419	50.39	Mlig455_042556	Neo: - Age: -		1.784	-	-	-	0.958	-	0.826	Mlig455_042556 {REF} {Length: 2405} {TRANSSPLICED} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=63.2]; Lipoma HMGIC fusion partner-like protein [PF10242.11, score=20.8]} {Dmel: FBgn0013720, pck, pickel, [Score=79.0, Expect=4e-17]} {Smed: dd_Smed_v6_2204_1_2, dd_Smed_v6_2204_1_2, [Score=168, Expect=2e-50]} {RNA1509_5823, RNA1509_6115} {RNA1310_30062, RNA1509_5823, RNA1509_6115} {RNA1509_5823, RNA1509_6115, RNA815_14070}
5.	MligTC455_30539	510	10.63	Mlig455_020638	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.386		1.708	-	-	0.731	-	0.977	-	Mlig455_020638 {REF} {Length: 3232} {Smed: dd_Smed_v6_6429_0_1, dd_Smed_v6_6429_0_1, [RH, Score=123, Expect=1e-30]} {RNA1509_3399} {RNA1310_6735.1} {RNA815_2838.1}
6.	MligTC455_33378	579	12.07	Mlig455_013508	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.320 Region-enriched R2: 2.375/0.00048	DNAH11	1.705	-	-	-	-	0.746	0.959	Mlig455_013508 {REF} {Length: 18482} {TRANSSPLICED} {Pfam: Dynein heavy chain, N-terminal region 1 [PF08385.14, score=331.7]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=259.1]; P-loop containing dynein motor region [PF12775.9, score=116.0]; Dynein heavy chain AAA lid domain [PF17852.3, score=66.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=37.3]; AAA domain [PF13401.8, score=24.8]; AAA ATPase domain [PF13191.8, score=21.7]; AAA domain [PF13173.8, score=21.4]; P-loop containing region of AAA domain [PF13555.8, score=20.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.1]; ABC transporter [PF00005.29, score=19.9]} {Human: ENSG00000105877, DNAH11, dynein axonemal heavy chain 11, [Score=321, Expect=8e-87]} {Mouse: ENSMUSG00000018581, Dnah11, dynein, axonemal, heavy chain 11, [Score=317, Expect=7e-86]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=214, Expect=9e-55]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=99.0, Expect=6e-20]} {Smed: dd_Smed_v6_10425_0_1, dd_Smed_v6_10425_0_1, [RH, Score=529, Expect=2e-150]} {RNA1509_1016, RNA1509_42828, RNA1509_6223} {RNA1310_13, RNA1509_1016, RNA1509_42828, RNA1509_6223} {RNA1509_1016, RNA1509_42828, RNA1509_6223, RNA815_25.1}
7.	MligTC455_53915	113	2.36	Mlig455_018452	Neo: - Age: -		0.975	-	-	-	0.975	-	-	Mlig455_018452 {REF} {Length: 3976} {TRANSSPLICED} {Pfam: Cadherin-like beta sandwich domain [PF12733.9, score=98.5]; TPR repeat [PF13414.8, score=29.6]; Tetratricopeptide repeat [PF07719.19, score=24.7]; Tetratricopeptide repeat [PF13428.8, score=23.1]; Tetratricopeptide repeat [PF13424.8, score=22.6]; Tetratricopeptide repeat [PF14559.8, score=22.0]} {Smed: dd_Smed_v6_13836_0_1, dd_Smed_v6_13836_0_1, [RH, Score=277, Expect=2e-77]} {RNA1509_15096} {RNA1310_1559.1} {RNA815_7116}
8.	MligTC455_47948	100	2.07	Mlig455_005840	Neo: - Age: - Region-enriched R2: 3.643/0.03527	TSPAN16	0.956	-	-	-	-	0.956	-	Mlig455_005840 {REF} {Length: 2130} {Pfam: Tetraspanin family [PF00335.22, score=86.4]} {Human: ENSG00000130167, TSPAN16, tetraspanin 16, [Score=48.1, Expect=6e-06]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=50.4, Expect=7e-07]} {Dmel: FBgn0036769, Tsp74F, Tetraspanin 74F, [Score=68.2, Expect=4e-13]} {Smed: dd_Smed_v6_854_1_1, dd_Smed_v6_854_1_1, [Score=119, Expect=5e-32]} {RNA1509_35459} {RNA1310_22253, RNA1509_35459} {RNA1509_35459, RNA815_11065}
9.	MligTC455_45692	457	9.52	Mlig455_034177	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_034177 {REF} {Length: 2499} {Pfam: Innexin [PF00876.20, score=309.1]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=92.8, Expect=3e-20]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=206, Expect=2e-61]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=281, Expect=2e-89]} {RNA1509_41490} {RNA1310_6920.1} {RNA815_1634.1}
10.	MligTC455_26817	353	7.36	Mlig455_062943	Neo: - Age: logFC(26M/2M)=-0.515	TTLL10	0.951	-	-	-	-	0.951	-	Mlig455_062943 {REF} {Length: 3909} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.8]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=58.2, Expect=8e-09]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=87.4, Expect=9e-19]} {RNA1509_23478} {RNA1310_12709.1} {RNA815_2937}

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