TomoSeq data search

Data search

Results for MligTC455_33425

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33425

391

8.14

Mlig455_048402

Neo: -

Age: -

ABCC2

Mlig455_048402 {REF} {Length: 3014} {Pfam: ABC transporter transmembrane region [PF00664.25, score=131.5]} {Human: ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=240, Expect=3e-67]} {Mouse: ENSMUSG00000025194, Abcc2, ATP-binding cassette, sub-family C (CFTR/MRP), member 2, [Score=219, Expect=2e-60]; ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=215, Expect=7e-59]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=213, Expect=3e-58]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=319, Expect=9e-95]} {Celegans: WBGene00003410, mrp-4, [Score=313, Expect=1e-92]} {Smed: dd_Smed_v6_9208_0_4, dd_Smed_v6_9208_0_4, [Score=254, Expect=1e-72]} {RNA1509_37826} {RNA1310_814.1} {RNA815_219}

Cumulative graph for MligTC455_33425

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.179	3.497	0.90730	1.00000
RegionR2	0.427	3.497	0.56086	0.92322
RegionR3	0.386	3.497	0.46969	0.97537
RegionR4	-0.322	3.497	0.64375	0.94809
RegionR5	-0.121	3.497	0.80601	1.00000
RegionR6	0.233	3.497	0.68632	1.00000
RegionR7	-0.776	3.497	0.35986	0.99620
RegionR8	0.353	3.497	0.70745	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.915	3.497	0.25004	0.96639
RegenerationR2	0.014	3.497	0.98559	1.00000
RegenerationR3	0.085	3.497	0.89865	1.00000
RegenerationR4	0.562	3.497	0.40865	0.81952
RegenerationR5	0.32	3.497	0.59069	0.90591
RegenerationR6	0.728	3.497	0.25397	0.60392
RegenerationBL	1.275	3.497	0.08481	0.34125
RegenerationTP	-0.174	3.497	0.84999	1.00000

Genes with expression patterns similar to MligTC455_33425

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33425	391	8.14	Mlig455_048402	Neo: - Age: -	ABCC2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048402 {REF} {Length: 3014} {Pfam: ABC transporter transmembrane region [PF00664.25, score=131.5]} {Human: ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=240, Expect=3e-67]} {Mouse: ENSMUSG00000025194, Abcc2, ATP-binding cassette, sub-family C (CFTR/MRP), member 2, [Score=219, Expect=2e-60]; ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=215, Expect=7e-59]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=213, Expect=3e-58]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=319, Expect=9e-95]} {Celegans: WBGene00003410, mrp-4, [Score=313, Expect=1e-92]} {Smed: dd_Smed_v6_9208_0_4, dd_Smed_v6_9208_0_4, [Score=254, Expect=1e-72]} {RNA1509_37826} {RNA1310_814.1} {RNA815_219}
2.	MligTC455_43629	506	10.55	Mlig455_044203	Neo: Neoblast, stringent Age: -	G2E3	1.768	-	0.813	-	-	-	0.955	Mlig455_044203 {REF} {Length: 2493} {Pfam: PHD-like zinc-binding domain [PF13771.8, score=44.9]} {Human: ENSG00000092140, G2E3, G2/M-phase specific E3 ubiquitin protein ligase, [RH, Score=155, Expect=3e-40]} {Mouse: ENSMUSG00000035293, G2e3, G2/M-phase specific E3 ubiquitin ligase, [RH, Score=144, Expect=2e-36]; ENSMUSG00000021902, Phf7, PHD finger protein 7, [RH, Score=137, Expect=2e-36]} {Dmel: FBgn0005683, pie, pineapple eye, [RH, Score=110, Expect=2e-25]} {Smed: dd_Smed_v6_6301_0_1, dd_Smed_v6_6301_0_1, [RH, Score=116, Expect=5e-28]} {RNA1509_40157} {RNA1310_12923.2, RNA1509_40157} {RNA1509_40157, RNA815_4856}
3.	MligTC455_28244	360	7.5	Mlig455_000112	Neo: - Age: -	SLC25A44	0.963	-	-	-	-	-	0.963	Mlig455_000112 {REF} {Length: 4557} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=151.9]} {Human: ENSG00000160785, SLC25A44, solute carrier family 25 member 44, [RH, Score=214, Expect=7e-67]} {Mouse: ENSMUSG00000050144, Slc25a44, solute carrier family 25, member 44, [RH, Score=218, Expect=2e-68]} {Dmel: FBgn0039223, CG5805, [RH, Score=255, Expect=3e-83]} {Celegans: WBGene00008767, F13G3.7, [RH, Score=189, Expect=3e-57]} {Smed: dd_Smed_v6_8650_0_2, dd_Smed_v6_8650_0_2, [RH, Score=282, Expect=3e-94]} {RNA1509_12802, RNA1509_52610} {RNA1310_14951, RNA1509_52610} {RNA1509_52610, RNA815_6514}
4.	MligTC455_27367	224	4.67	Mlig455_023062	Neo: - Age: Down-Down-Up Region-enriched R4: 4.130/0.01108		0.96	-	-	-	0.960	-	-	Mlig455_023062 {REF} {Length: 3012} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=40.2]; C2H2-type zinc finger [PF13894.8, score=27.3]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=22.7]} {Dmel: FBgn0003963, ush, u-shaped, [Score=59.3, Expect=1e-08]} {RNA1509_20943, RNA1509_57739} {RNA1310_6862, RNA1509_20943, RNA1509_57739} {RNA1509_20943, RNA1509_57739, RNA815_17333}
5.	MligTC455_24810	552	11.49	Mlig455_062759	Neo: - Age: - Region-enriched R5: 1.254/0.00285	SLC11A2	0.954	-	-	-	-	-	0.954	Mlig455_062759 {REF} {Length: 2973} {Pfam: Natural resistance-associated macrophage protein [PF01566.20, score=388.9]} {Human: ENSG00000110911, SLC11A2, solute carrier family 11 member 2, [RH, Score=596, Expect=0.0]; ENSG00000018280, SLC11A1, solute carrier family 11 member 1, [RH, Score=570, Expect=0.0]} {Mouse: ENSMUSG00000023030, Slc11a2, solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2, [RH, Score=621, Expect=0.0]} {Dmel: FBgn0011672, Mvl, Malvolio, [RH, Score=617, Expect=0.0]} {Celegans: WBGene00004876, smf-1, NRAMP-like transporter smf-1, [RH, Score=549, Expect=0.0]} {Smed: dd_Smed_v6_4739_0_1, dd_Smed_v6_4739_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_10227, RNA1509_36680} {RNA1310_10668.1, RNA1509_36680} {RNA1509_36680, RNA815_4424.1}
6.	MligTC455_49220	49	1.01	Mlig455_035853	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_035853 {REF} {Length: 1375} {RNA1509_52052} {RNA1310_50539} {RNA815_453.2}

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