TomoSeq data search

Data search

Results for MligTC455_49220

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49220

49

1.01

Mlig455_035853

Neo: -

Age: -

Mlig455_035853 {REF} {Length: 1375} {RNA1509_52052} {RNA1310_50539} {RNA815_453.2}

Cumulative graph for MligTC455_49220

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	5.858	1.374	0.06157	0.56714
RegionR2	-0.627	1.374	0.78820	1.00000
RegionR3	-0.502	1.374	0.74455	1.00000
RegionR4	1.423	1.374	0.26814	0.57319
RegionR5	0.711	1.374	0.33842	0.68509
RegionR6	-2.788	1.374	0.99984	1.00000
RegionR7	-2.111	1.374	0.99988	1.00000
RegionR8	-1.962	1.374	0.99966	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.596	1.374	0.25000	0.96639
RegenerationR2	2.47	1.374	0.03366	0.30284
RegenerationR3	1.456	1.374	0.36460	0.78004
RegenerationR4	1.521	1.374	0.35865	0.78664
RegenerationR5	1.533	1.374	0.21707	0.65187
RegenerationR6	5.146	1.374	0.00383	0.07351
RegenerationBL	4.805	1.374	0.01324	0.11874
RegenerationTP	1.624	1.374	0.52894	0.91961

Genes with expression patterns similar to MligTC455_49220

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49220	49	1.01	Mlig455_035853	Neo: - Age: -		4	1.000	-	-	1.000	1.000	1.000	Mlig455_035853 {REF} {Length: 1375} {RNA1509_52052} {RNA1310_50539} {RNA815_453.2}
2.	MligTC455_13928	20	0.42	Mlig455_021798	Neo: - Age: -	ASCL5	0.988	-	-	-	-	-	0.988	Mlig455_021798 {REF} {Length: 1778} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=57.9]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=68.2, Expect=3e-14]; ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=67.0, Expect=5e-14]; ENSG00000176009, ASCL3, achaete-scute family bHLH transcription factor 3, [RH, Score=65.1, Expect=3e-13]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=67.8, Expect=2e-14]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=64.7, Expect=3e-13]} {Dmel: FBgn0004170, sc, scute, [RH, Score=67.8, Expect=9e-14]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=57.8, Expect=2e-10]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [Score=72.4, Expect=5e-17]} {RNA1509_26675} {RNA1310_40247} {RNA815_47719.2}
3.	MligTC455_17968	153	3.18	Mlig455_039261, Mlig455_039286	Neo: - Age: - Regeneration-downregulated R6: -5.278 Regeneration-depleted R6: -5.278		0.97	-	-	-	-	-	0.970	Mlig455_039261 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_51604} {RNA1310_20613.1} {RNA815_61527} Mlig455_039286 {REF} {Length: 324} {NoTransDecoderORF} {RNA1509_51604} {RNA1310_20613.1, RNA1509_51604} {RNA1509_51604, RNA815_61527}
4.	MligTC455_42425	816	17.01	Mlig455_014864, Mlig455_014905	Neo: - Age: Down-Up-Down	PPM1E	0.964	-	-	-	-	0.964	-	Mlig455_014864 {REF} {Length: 2297} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=146.5]; Protein phosphatase 2C [PF13672.8, score=29.5]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=20.7]} {Human: ENSG00000175175, PPM1E, protein phosphatase, Mg2+/Mn2+ dependent 1E, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000046442, Ppm1e, protein phosphatase 1E (PP2C domain containing), [Score=114, Expect=1e-26]} {Dmel: FBgn0032702, CG10376, [RH, Score=125, Expect=2e-31]} {Celegans: WBGene00001412, fem-2, Ca(2+)/calmodulin-dependent protein kinase phosphatase, [RH, Score=107, Expect=3e-25]} {Smed: dd_Smed_v6_4958_0_1, dd_Smed_v6_4958_0_1, [RH, Score=117, Expect=2e-28]} {RNA1509_58149} {RNA1310_10200, RNA1509_58149} {RNA1509_58149, RNA815_4689.1} Mlig455_014905 {REF} {Length: 2611} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=146.3]; Protein phosphatase 2C [PF13672.8, score=29.6]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=20.9]} {Human: ENSG00000175175, PPM1E, protein phosphatase, Mg2+/Mn2+ dependent 1E, [Score=113, Expect=2e-26]} {Mouse: ENSMUSG00000046442, Ppm1e, protein phosphatase 1E (PP2C domain containing), [Score=114, Expect=1e-26]} {Dmel: FBgn0032702, CG10376, [RH, Score=125, Expect=2e-31]} {Celegans: WBGene00001412, fem-2, Ca(2+)/calmodulin-dependent protein kinase phosphatase, [RH, Score=107, Expect=4e-25]} {Smed: dd_Smed_v6_4958_0_1, dd_Smed_v6_4958_0_1, [RH, Score=117, Expect=2e-28]} {RNA1509_15705} {RNA1310_7889, RNA1509_15705} {RNA1509_15705, RNA815_4689.1}
5.	MligTC455_28962	77	1.61	Mlig455_049735, Mlig455_056147	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_049735 {REF} {Length: 5656} {TRANSSPLICED} {RNA1310_30688} {RNA815_22497} Mlig455_056147 {REF} {Length: 1708} {TRANSSPLICED} {RNA1310_30688} {RNA815_22497}
6.	MligTC455_10621	34	0.7	Mlig455_016992	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_016992 {REF} {Length: 838} {NoTransDecoderORF}
7.	MligTC455_16094	50	1.03	Mlig455_029690	Neo: - Age: - Region-enriched R4: 5.911/0.01385		0.955	-	-	-	-	-	0.955	Mlig455_029690 {REF} {Length: 1480} {NoTransDecoderORF} {RNA1310_45532.2}
8.	MligTC455_27687	322	6.71	Mlig455_070624	Neo: Irradiation Age: -	ZFP62	0.955	-	-	-	-	0.955	-	Mlig455_070624 {REF} {Length: 6382} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=89.8]; Zinc-finger double domain [PF13465.8, score=82.9]; Zinc finger, C2H2 type [PF00096.28, score=66.6]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.7]} {Human: ENSG00000196670, ZFP62, ZFP62 zinc finger protein, [Score=153, Expect=5e-37]; ENSG00000167380, ZNF226, zinc finger protein 226, [Score=153, Expect=3e-37]; ENSG00000272602, ZNF595, zinc finger protein 595, [Score=152, Expect=1e-38]; ENSG00000196867, ZFP28, ZFP28 zinc finger protein, [Score=150, Expect=4e-36]; ENSG00000197961, ZNF121, zinc finger protein 121, [Score=149, Expect=3e-38]; ENSG00000283201, AC092329.3, novel protein, [Score=147, Expect=1e-36]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=154, Expect=2e-37]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=149, Expect=2e-37]; ENSMUSG00000046311, Zfp62, zinc finger protein 62, [Score=147, Expect=3e-35]; ENSMUSG00000062861, Zfp28, zinc finger protein 28, [Score=147, Expect=2e-35]} {Dmel: FBgn0020309, crol, crooked legs, [Score=127, Expect=2e-29]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=84.7, Expect=4e-17]} {Smed: dd_Smed_v6_5058_0_1, dd_Smed_v6_5058_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_1385, RNA1509_19208} {RNA1310_615.1, RNA1509_19208} {RNA1509_19208, RNA815_756}
9.	MligTC455_08626	34	0.7	Mlig455_016338	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_016338 {REF} {Length: 1057} {NoTransDecoderORF}
10.	MligTC455_47692	358	7.46	Mlig455_004798	Neo: - Age: Up-Down-Down Region-enriched R5: 1.250/0.00667		0.954	-	-	-	-	0.954	-	Mlig455_004798 {REF} {Length: 1270} {NoTransDecoderORF} {RNA1509_31836} {RNA1310_47389, RNA1509_31836} {RNA1509_31836, RNA815_23742}
11.	MligTC455_33425	391	8.14	Mlig455_048402	Neo: - Age: -	ABCC2	0.952	-	-	-	0.952	-	-	Mlig455_048402 {REF} {Length: 3014} {Pfam: ABC transporter transmembrane region [PF00664.25, score=131.5]} {Human: ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=240, Expect=3e-67]} {Mouse: ENSMUSG00000025194, Abcc2, ATP-binding cassette, sub-family C (CFTR/MRP), member 2, [Score=219, Expect=2e-60]; ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=215, Expect=7e-59]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=213, Expect=3e-58]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=319, Expect=9e-95]} {Celegans: WBGene00003410, mrp-4, [Score=313, Expect=1e-92]} {Smed: dd_Smed_v6_9208_0_4, dd_Smed_v6_9208_0_4, [Score=254, Expect=1e-72]} {RNA1509_37826} {RNA1310_814.1} {RNA815_219}
12.	MligTC455_38119	5	0.11	Mlig455_069286	Neo: - Age: logFC(26M/2M)=1.923		0.952	-	-	-	-	-	0.952	Mlig455_069286 {REF} {Length: 503} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41513} {RNA1310_24725.2} {RNA815_57959}
13.	MligTC455_35036	482	10.05	Mlig455_052462	Neo: - Age: Down-Up-Up	SLC35F5	0.951	-	-	-	0.951	-	-	Mlig455_052462 {REF} {Length: 4349} {TRANSSPLICED} {Pfam: Dynamin family [PF00350.25, score=26.0]; 50S ribosome-binding GTPase [PF01926.25, score=24.4]} {Human: ENSG00000115084, SLC35F5, solute carrier family 35 member F5, [Score=127, Expect=8e-30]} {Mouse: ENSMUSG00000026342, Slc35f5, solute carrier family 35, member F5, [Score=122, Expect=2e-28]} {Dmel: FBgn0034032, CG8195, [Score=104, Expect=5e-23]} {Smed: dd_Smed_v6_7230_0_1, dd_Smed_v6_7230_0_1, [Score=152, Expect=9e-39]} {RNA1509_18319} {RNA1310_5310} {RNA815_9813}
14.	MligTC455_32327	233	4.86	Mlig455_002541, Mlig455_047503, Mlig455_053096, Mlig455_053228	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_002541 {REF} {Length: 2728} {Pfam: DDE superfamily endonuclease [PF03184.21, score=37.8]} {RNA1310_63988} {RNA815_57890} Mlig455_047503 {REF} {Length: 2514} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890} Mlig455_053096 {REF} {Length: 2663} {Pfam: OTU-like cysteine protease [PF02338.21, score=32.7]} {RNA1310_63988} {RNA815_57890} Mlig455_053228 {REF} {Length: 2632} {Pfam: OTU-like cysteine protease [PF02338.21, score=31.4]} {RNA1310_63988} {RNA815_57890}

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