TomoSeq data search

Data search

Results for MligTC455_33438

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33438

213

4.44

Mlig455_041559, Mlig455_049074, Mlig455_058404

Neo: -

Age: -

KIF15

Mlig455_041559 {REF} {Length: 3746} {TRANSSPLICED} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [Score=56.2, Expect=5e-09]} {RNA1509_12203} {RNA1310_718} {RNA815_1913}

Mlig455_049074 {REF} {Length: 2295} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=51.2, Expect=2e-06]} {RNA1509_12203} {RNA1310_718} {RNA815_1913}

Mlig455_058404 {REF} {Length: 5978} {Pfam: Kinesin motor domain [PF00225.25, score=64.4]; Microtubule binding [PF16796.7, score=38.9]; Sporozoite P67 surface antigen [PF05642.13, score=35.1]} {Human: ENSG00000163808, KIF15, kinesin family member 15, [Score=64.7, Expect=7e-10]; ENSG00000280610, KIF15, kinesin family member 15, [Score=64.7, Expect=7e-10]; ENSG00000131437, KIF3A, kinesin family member 3A, [Score=61.6, Expect=5e-09]; ENSG00000164627, KIF6, kinesin family member 6, [Score=61.6, Expect=5e-09]} {Mouse: ENSMUSG00000036768, Kif15, kinesin family member 15, [Score=65.9, Expect=2e-10]} {Dmel: FBgn0011692, pav, pavarotti, [Score=60.5, Expect=7e-09]} {Celegans: WBGene00002228, klp-18, Kinesin-like protein; Kinesin-like protein-18, [Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [RH, Score=67.8, Expect=3e-12]} {RNA1509_12203} {RNA1310_718} {RNA815_1913}

Cumulative graph for MligTC455_33438

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.871	2.754	0.50646	1.00000
RegionR2	1.436	2.754	0.05014	0.26708
RegionR3	0.721	2.754	0.27959	0.82339
RegionR4	-0.091	2.754	0.93117	1.00000
RegionR5	-0.403	2.754	0.63178	0.98496
RegionR6	-0.221	2.754	0.80713	1.00000
RegionR7	0.147	2.754	0.88430	1.00000
RegionR8	0.282	2.754	0.83617	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.797	2.754	0.61296	1.00000
RegenerationR2	0.004	2.754	0.99877	1.00000
RegenerationR3	0.21	2.754	0.72465	0.95620
RegenerationR4	0.744	2.754	0.21691	0.66396
RegenerationR5	0.785	2.754	0.17241	0.60119
RegenerationR6	1.403	2.754	0.03004	0.21640
RegenerationBL	-0.308	2.754	0.75326	1.00000
RegenerationTP	1.844	2.754	0.02492	0.26744

Genes with expression patterns similar to MligTC455_33438

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33438	213	4.44	Mlig455_041559, Mlig455_049074, Mlig455_058404	Neo: - Age: -	KIF15	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041559 {REF} {Length: 3746} {TRANSSPLICED} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [Score=56.2, Expect=5e-09]} {RNA1509_12203} {RNA1310_718} {RNA815_1913} Mlig455_049074 {REF} {Length: 2295} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=51.2, Expect=2e-06]} {RNA1509_12203} {RNA1310_718} {RNA815_1913} Mlig455_058404 {REF} {Length: 5978} {Pfam: Kinesin motor domain [PF00225.25, score=64.4]; Microtubule binding [PF16796.7, score=38.9]; Sporozoite P67 surface antigen [PF05642.13, score=35.1]} {Human: ENSG00000163808, KIF15, kinesin family member 15, [Score=64.7, Expect=7e-10]; ENSG00000280610, KIF15, kinesin family member 15, [Score=64.7, Expect=7e-10]; ENSG00000131437, KIF3A, kinesin family member 3A, [Score=61.6, Expect=5e-09]; ENSG00000164627, KIF6, kinesin family member 6, [Score=61.6, Expect=5e-09]} {Mouse: ENSMUSG00000036768, Kif15, kinesin family member 15, [Score=65.9, Expect=2e-10]} {Dmel: FBgn0011692, pav, pavarotti, [Score=60.5, Expect=7e-09]} {Celegans: WBGene00002228, klp-18, Kinesin-like protein; Kinesin-like protein-18, [Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [RH, Score=67.8, Expect=3e-12]} {RNA1509_12203} {RNA1310_718} {RNA815_1913}
2.	MligTC455_13794	122	2.54	Mlig455_007349	Neo: - Age: -		1.75	-	-	0.950	-	-	0.800	Mlig455_007349 {REF} {Length: 969} {RNA1509_18274, RNA1509_24366} {RNA1310_22608, RNA1509_18274} {RNA1509_18274, RNA815_25844}
3.	MligTC455_35276	20	0.41	Mlig455_026610, Mlig455_042800	Neo: - Age: -		1.741	-	-	0.951	-	-	0.790	Mlig455_026610 {REF} {Length: 2086} {RNA1310_18660} {RNA815_15449} Mlig455_042800 {REF} {Length: 2333} {RNA1310_18660} {RNA815_15449}
4.	MligTC455_31058	105	2.19	Mlig455_055504	Neo: - Age: Down-Up-Down Region-enriched R2: 4.938/0.00376		1.727	-	-	0.965	-	0.762	-	Mlig455_055504 {REF} {Length: 2826} {RNA1509_37722} {RNA1310_40193} {RNA815_29874}
5.	MligTC455_17204	163	3.39	Mlig455_052035, Mlig455_057261	Neo: - Age: logFC(26M/2M)=0.633 Region-enriched R2: 3.666/0.00172		1.694	-	-	0.971	-	0.723	-	Mlig455_052035 {REF} {Length: 833} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_64963} {RNA815_45593} Mlig455_057261 {REF} {Length: 1330}
6.	MligTC455_43383	29	0.6	Mlig455_035092	Neo: - Age: -		0.978	-	-	0.978	-	-	-	Mlig455_035092 {REF} {Length: 654} {NoTransDecoderORF} {RNA1310_42279} {RNA815_20885}
7.	MligTC455_52468	516	10.76	Mlig455_064232	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.559	C11orf1	0.974	-	-	-	-	0.974	-	Mlig455_064232 {REF} {Length: 1198} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=55.2]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=52.0, Expect=4e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=53.1, Expect=3e-09]} {RNA1509_29539} {RNA1310_48982, RNA1509_29539} {RNA1509_29539, RNA815_26980.2}
8.	MligTC455_03805	556	11.59	Mlig455_060349	Neo: - Age: - Region-enriched R4: 3.263/0.04839		0.972	-	-	-	-	0.972	-	Mlig455_060349 {REF} {Length: 315} {NoTransDecoderORF} {RNA1509_54152} {RNA1310_33596.1} {RNA815_2733.1}
9.	MligTC455_29081	43	0.9	Mlig455_033762	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_033762 {REF} {Length: 1438} {NoTransDecoderORF} {RNA1509_54569} {RNA1310_7225.1} {RNA815_27178}
10.	MligTC455_39077	228	4.76	Mlig455_049629	Neo: - Age: Up-Down-Down Region-enriched R2: 2.634/0.01001	ERC1	0.962	-	-	0.962	-	-	-	Mlig455_049629 {REF} {Length: 7168} {TRANSSPLICED} {Pfam: RIM-binding protein of the cytomatrix active zone [PF10174.11, score=195.4]; Autophagy protein 16 (ATG16) [PF08614.13, score=19.1]} {Human: ENSG00000283017, ERC1, ELKS/RAB6-interacting/CAST family member 1, [RH, Score=203, Expect=4e-52]; ENSG00000082805, ERC1, ELKS/RAB6-interacting/CAST family member 1, [RH, Score=203, Expect=4e-52]; ENSG00000187672, ERC2, ELKS/RAB6-interacting/CAST family member 2, [RH, Score=196, Expect=2e-50]} {Mouse: ENSMUSG00000030172, Erc1, ELKS/RAB6-interacting/CAST family member 1, [RH, Score=209, Expect=2e-54]} {Dmel: FBgn0259246, brp, bruchpilot, [RH, Score=123, Expect=1e-27]} {Celegans: WBGene00018330, elks-1, Mammalian ELKS/CAST/ERC/Rab6 interacting protein homolog, [RH, Score=76.6, Expect=1e-13]} {Smed: dd_Smed_v6_12278_0_1, dd_Smed_v6_12278_0_1, [RH, Score=397, Expect=4e-112]} {RNA1509_4334} {RNA1310_846.1, RNA1509_4334} {RNA1509_4334, RNA815_574.1}
11.	MligTC455_40502	75	1.57	Mlig455_011578	Neo: - Age: Down-Up-Down	SPATA18	0.956	-	-	0.956	-	-	-	Mlig455_011578 {REF} {Length: 2873} {TRANSSPLICED} {Pfam: Mitochondria-eating protein [PF16026.7, score=153.7]} {Human: ENSG00000163071, SPATA18, spermatogenesis associated 18, [Score=179, Expect=2e-48]} {Mouse: ENSMUSG00000029155, Spata18, spermatogenesis associated 18, [Score=220, Expect=3e-63]} {Smed: dd_Smed_v6_6321_0_1, dd_Smed_v6_6321_0_1, [Score=344, Expect=3e-111]} {RNA1509_30652} {RNA1310_30604} {RNA815_17332}
12.	MligTC455_38387	155	3.23	Mlig455_051948	Neo: - Age: - Region-enriched R8: 3.478/0.04404	RAC1	0.954	-	-	0.954	-	-	-	Mlig455_051948 {REF} {Length: 3895} {Pfam: Ras family [PF00071.24, score=174.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.2]; ADP-ribosylation factor family [PF00025.23, score=35.6]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=223, Expect=5e-74]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=219, Expect=2e-72]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=217, Expect=2e-71]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=215, Expect=1e-70]; ENSG00000070831, CDC42, cell division cycle 42, [Score=215, Expect=1e-70]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=223, Expect=3e-74]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=219, Expect=1e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=216, Expect=4e-71]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=215, Expect=8e-71]} {Dmel: FBgn0010333, Rac1, [Score=224, Expect=1e-74]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=224, Expect=5e-75]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=209, Expect=4e-69]} {RNA1509_22651} {RNA1310_24166.1} {RNA815_17420}
13.	MligTC455_22890	365	7.6	Mlig455_021793	Neo: - Age: -	ARHGAP40	0.951	-	-	-	-	-	0.951	Mlig455_021793 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=112.2]} {Human: ENSG00000124143, ARHGAP40, Rho GTPase activating protein 40, [RH, Score=174, Expect=6e-46]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=167, Expect=9e-44]} {Dmel: FBgn0039994, conu, conundrum, [Score=91.7, Expect=5e-19]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [Score=79.7, Expect=4e-15]} {Smed: dd_Smed_v6_4507_0_1, dd_Smed_v6_4507_0_1, [Score=75.9, Expect=4e-14]} {RNA1509_9436} {RNA1310_4918, RNA1509_9436} {RNA1509_9436, RNA815_2562.1}

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