Data search
Results for MligTC455_22890
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22890 | 365 | 7.60 | Mlig455_021793 | Neo: - Age: - |
ARHGAP40 | Mlig455_021793 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=112.2]} {Human: ENSG00000124143, ARHGAP40, Rho GTPase activating protein 40, [RH, Score=174, Expect=6e-46]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=167, Expect=9e-44]} {Dmel: FBgn0039994, conu, conundrum, [Score=91.7, Expect=5e-19]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [Score=79.7, Expect=4e-15]} {Smed: dd_Smed_v6_4507_0_1, dd_Smed_v6_4507_0_1, [Score=75.9, Expect=4e-14]} {RNA1509_9436} {RNA1310_4918, RNA1509_9436} {RNA1509_9436, RNA815_2562.1} |
Cumulative graph for MligTC455_22890
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.536 | 3.344 | 0.65547 | 1.00000 | |
| RegionR2 | 1.05 | 3.344 | 0.05543 | 0.28233 | |
| RegionR3 | -0.863 | 3.344 | 0.07324 | 0.47984 | |
| RegionR4 | -0.194 | 3.344 | 0.69885 | 0.98777 | |
| RegionR5 | 0.248 | 3.344 | 0.51447 | 0.87750 | |
| RegionR6 | -0.017 | 3.344 | 0.97242 | 1.00000 | |
| RegionR7 | 0.691 | 3.344 | 0.19772 | 0.80431 | |
| RegionR8 | -0.379 | 3.344 | 0.62784 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.305 | 3.344 | 0.30611 | 0.99987 | |
| RegenerationR2 | 0.28 | 3.344 | 0.51749 | 0.87849 | |
| RegenerationR3 | 0.936 | 3.344 | 0.09714 | 0.49918 | |
| RegenerationR4 | -0.075 | 3.344 | 0.89322 | 1.00000 | |
| RegenerationR5 | 0.259 | 3.344 | 0.57749 | 0.89933 | |
| RegenerationR6 | 0.771 | 3.344 | 0.15376 | 0.47960 | |
| RegenerationBL | -0.169 | 3.344 | 0.82559 | 1.00000 | |
| RegenerationTP | 1.352 | 3.344 | 0.02933 | 0.28810 |
Genes with expression patterns similar to MligTC455_22890
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22890 | 365 | 7.6 | Mlig455_021793 | Neo: - Age: - |
ARHGAP40 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021793 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=112.2]} {Human: ENSG00000124143, ARHGAP40, Rho GTPase activating protein 40, [RH, Score=174, Expect=6e-46]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=167, Expect=9e-44]} {Dmel: FBgn0039994, conu, conundrum, [Score=91.7, Expect=5e-19]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [Score=79.7, Expect=4e-15]} {Smed: dd_Smed_v6_4507_0_1, dd_Smed_v6_4507_0_1, [Score=75.9, Expect=4e-14]} {RNA1509_9436} {RNA1310_4918, RNA1509_9436} {RNA1509_9436, RNA815_2562.1} |
| 2. | MligTC455_48041 | 684 | 14.26 | Mlig455_015166 | Neo: - Age: Down-Up-Down |
SQSTM1 | 2.379 | - | - | 0.722 | - | 0.705 | 0.952 | Mlig455_015166 {REF} {Length: 2821} {Pfam: UBA domain [PF16577.7, score=30.1]; Zinc finger, ZZ type [PF00569.19, score=27.1]; PB1 domain [PF00564.26, score=25.6]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=108, Expect=2e-25]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [RH, Score=59.7, Expect=3e-09]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=52.8, Expect=3e-07]} {RNA1509_49422, RNA1509_56663} {RNA1310_11564, RNA1509_56663} {RNA1509_56663, RNA815_6596} |
| 3. | MligTC455_51930 | 251 | 5.23 | Mlig455_032064 | Neo: Irradiation Age: Down-Down-Up |
1.799 | - | - | 0.960 | - | - | 0.839 | Mlig455_032064 {REF} {Length: 1841} {RNA1509_40831} {RNA1310_3497.1} {RNA815_11839} | |
| 4. | MligTC455_25486 | 190 | 3.96 | Mlig455_026974, Mlig455_030723 | Neo: - Age: - |
GABBR1 | 1.689 | - | - | 0.716 | - | - | 0.973 | Mlig455_026974 {REF} {Length: 4525} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=189.2]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=169.2]; Periplasmic binding protein [PF13458.8, score=49.2]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [RH, Score=667, Expect=0.0]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [RH, Score=590, Expect=0.0]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [RH, Score=630, Expect=0.0]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973} Mlig455_030723 {REF} {Length: 1229} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=73.2]; Periplasmic binding protein [PF13458.8, score=19.1]} {Human: ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=181, Expect=3e-51]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=180, Expect=2e-52]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=181, Expect=1e-51]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [Score=173, Expect=4e-49]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=172, Expect=2e-50]} {Smed: dd_Smed_v6_20665_0_1, dd_Smed_v6_20665_0_1, [Score=194, Expect=1e-56]} {RNA1509_21092} {RNA1310_7011.1} {RNA815_8973} |
| 5. | MligTC455_50605 | 192 | 4.01 | Mlig455_049014 | Neo: Irradiation Age: - |
CDC45 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_049014 {REF} {Length: 2627} {TRANSSPLICED} {Pfam: CDC45-like protein [PF02724.16, score=221.4]} {Human: ENSG00000093009, CDC45, cell division cycle 45, [RH, Score=278, Expect=5e-86]} {Mouse: ENSMUSG00000000028, Cdc45, cell division cycle 45, [RH, Score=265, Expect=6e-81]} {Dmel: FBgn0026143, CDC45L, [RH, Score=273, Expect=4e-84]} {Celegans: WBGene00009372, evl-18, [RH, Score=118, Expect=6e-28]} {Smed: dd_Smed_v6_16942_0_1, dd_Smed_v6_16942_0_1, [RH, Score=210, Expect=1e-60]} {RNA1509_27402} {RNA1310_23745.1, RNA1509_27402} {RNA1509_27402, RNA815_20917} |
| 6. | MligTC455_29817 | 447 | 9.31 | Mlig455_067318 | Neo: - Age: logFC(26M/2M)=-0.198 |
RNF31 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_067318 {REF} {Length: 8181} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=33.3]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [Score=168, Expect=2e-41]; ENSG00000285152, RNF31, ring finger protein 31, [Score=168, Expect=2e-41]; ENSG00000284845, AL136295.10, novel transcript, [Score=160, Expect=8e-41]; ENSG00000259529, AL136295.5, novel transcript, [Score=160, Expect=8e-41]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=169, Expect=4e-42]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=147, Expect=3e-35]} {Celegans: WBGene00001690, grd-1, GRounDhog (Hedgehog-like family), [Score=55.5, Expect=3e-07]} {Smed: dd_Smed_v6_7487_0_1, dd_Smed_v6_7487_0_1, [Score=97.1, Expect=2e-20]} {RNA1509_25307} {RNA1310_7993, RNA1509_25307} {RNA1509_25307, RNA815_9771} |
| 7. | MligTC455_33438 | 213 | 4.44 | Mlig455_041559, Mlig455_049074, Mlig455_058404 | Neo: - Age: - |
KIF15 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_041559 {REF} {Length: 3746} {TRANSSPLICED} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [Score=56.2, Expect=5e-09]} {RNA1509_12203} {RNA1310_718} {RNA815_1913} Mlig455_049074 {REF} {Length: 2295} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=51.2, Expect=2e-06]} {RNA1509_12203} {RNA1310_718} {RNA815_1913} Mlig455_058404 {REF} {Length: 5978} {Pfam: Kinesin motor domain [PF00225.25, score=64.4]; Microtubule binding [PF16796.7, score=38.9]; Sporozoite P67 surface antigen [PF05642.13, score=35.1]} {Human: ENSG00000163808, KIF15, kinesin family member 15, [Score=64.7, Expect=7e-10]; ENSG00000280610, KIF15, kinesin family member 15, [Score=64.7, Expect=7e-10]; ENSG00000131437, KIF3A, kinesin family member 3A, [Score=61.6, Expect=5e-09]; ENSG00000164627, KIF6, kinesin family member 6, [Score=61.6, Expect=5e-09]} {Mouse: ENSMUSG00000036768, Kif15, kinesin family member 15, [Score=65.9, Expect=2e-10]} {Dmel: FBgn0011692, pav, pavarotti, [Score=60.5, Expect=7e-09]} {Celegans: WBGene00002228, klp-18, Kinesin-like protein; Kinesin-like protein-18, [Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [RH, Score=67.8, Expect=3e-12]} {RNA1509_12203} {RNA1310_718} {RNA815_1913} |