TomoSeq data search

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Results for MligTC455_33594

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33594

28898

602.04

Mlig455_047282, Mlig455_069334

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.182

RPL18A

Mlig455_047282 {REF} {Length: 721} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703} {RNA815_24602}

Mlig455_069334 {REF} {Length: 644} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703} {RNA815_24602}

Cumulative graph for MligTC455_33594

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.999	9.314	0.00026	0.05450
RegionR2	-0.472	9.314	0.02009	0.15374
RegionR3	0.31	9.314	0.06961	0.46609
RegionR4	0.803	9.314	0.00002	0.00042
RegionR5	0.39	9.314	0.01991	0.09681
RegionR6	0.195	9.314	0.25813	0.84519
RegionR7	0.204	9.314	0.23253	0.85641
RegionR8	-0.432	9.314	0.03224	0.35205

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.874	9.314	0.01798	0.54862
RegenerationR2	-0.245	9.314	0.26391	0.71052
RegenerationR3	-0.362	9.314	0.10700	0.51720
RegenerationR4	-0.416	9.314	0.06874	0.41810
RegenerationR5	-0.358	9.314	0.10629	0.49366
RegenerationR6	-0.194	9.314	0.38598	0.72624
RegenerationBL	-0.207	9.314	0.28903	0.65096
RegenerationTP	-0.459	9.314	0.03251	0.30234

Genes with expression patterns similar to MligTC455_33594

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33594	28898	602.04	Mlig455_047282, Mlig455_069334	Neo: Int S/G2/M Age: logFC(26M/2M)=0.182	RPL18A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047282 {REF} {Length: 721} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703} {RNA815_24602} Mlig455_069334 {REF} {Length: 644} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703} {RNA815_24602}
2.	MligTC455_33593	14320	298.33	Mlig455_047332	Neo: - Age: logFC(26M/2M)=3.178	RPL18A	5.988	1.000	0.999	0.998	0.998	0.998	0.995	Mlig455_047332 {REF} {Length: 715} {TRANSSPLICED} {Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A [PF01775.19, score=175.0]} {Human: ENSG00000105640, RPL18A, ribosomal protein L18a, [RH, Score=249, Expect=3e-85]} {Mouse: ENSMUSG00000045128, Rpl18a, ribosomal protein L18A, [RH, Score=249, Expect=2e-85]} {Dmel: FBgn0010409, RpL18A, Ribosomal protein L18A, [RH, Score=228, Expect=4e-77]} {Celegans: WBGene00004432, rpl-20, 60S ribosomal protein L18a, [RH, Score=212, Expect=5e-71]} {Smed: dd_Smed_v6_437_0_1, dd_Smed_v6_437_0_1, [RH, Score=220, Expect=2e-74]} {RNA1509_299} {RNA1310_49703, RNA1509_299} {RNA1509_299, RNA815_24602}
3.	MligTC455_35172	18012	375.24	Mlig455_013415	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.342	RPS19	1.699	0.745	-	-	-	-	0.954	Mlig455_013415 {REF} {Length: 634} {TRANSSPLICED} {Pfam: Ribosomal protein S19e [PF01090.21, score=174.2]} {Human: ENSG00000105372, RPS19, ribosomal protein S19, [RH, Score=169, Expect=2e-54]} {Mouse: ENSMUSG00000040952, Rps19, ribosomal protein S19, [RH, Score=171, Expect=2e-55]} {Dmel: FBgn0010412, RpS19a, Ribosomal protein S19a, [RH, Score=152, Expect=6e-48]} {Celegans: WBGene00004488, rps-19, 40S ribosomal protein S19, [RH, Score=140, Expect=2e-43]} {Smed: dd_Smed_v6_202_0_1, dd_Smed_v6_202_0_1, [RH, Score=150, Expect=1e-47]} {RNA1509_13651, RNA1509_3878, RNA1509_6109, RNA1509_753} {RNA1310_55938, RNA1509_13651, RNA1509_3878, RNA1509_6109, RNA1509_753} {RNA1509_13651, RNA1509_3878, RNA1509_6109, RNA1509_753, RNA815_28607}
4.	MligTC455_36979	659	13.73	Mlig455_038265	Neo: - Age: -	SPTLC1	0.973	-	-	-	0.973	-	-	Mlig455_038265 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=135.4]} {Human: ENSG00000090054, SPTLC1, serine palmitoyltransferase long chain base subunit 1, [RH, Score=416, Expect=2e-141]} {Mouse: ENSMUSG00000021468, Sptlc1, serine palmitoyltransferase, long chain base subunit 1, [RH, Score=431, Expect=9e-148]} {Dmel: FBgn0086532, Spt-I, Serine palmitoyltransferase subunit I, [RH, Score=396, Expect=3e-134]} {Celegans: WBGene00016020, sptl-1, Serine palmitoyltransferase 1, [RH, Score=421, Expect=6e-144]} {Smed: dd_Smed_v6_1567_0_1, dd_Smed_v6_1567_0_1, [RH, Score=458, Expect=1e-158]} {RNA1509_11888} {RNA1310_18923, RNA1509_11888} {RNA1509_11888, RNA815_5056}
5.	MligTC455_39846	11660	242.93	Mlig455_004341, Mlig455_004353	Neo: Int S/G2/M Age: logFC(26M/2M)=0.306 Region-enriched R4: 1.674/0.00000 Regeneration-enriched BL: 1.619 Regeneration-enriched R6: 1.119	CCT7	0.955	-	-	-	0.955	-	-	Mlig455_004341 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1310_8189.1, RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695, RNA815_2882.1} Mlig455_004353 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_23051, RNA1509_8695} {RNA1310_8189.1, RNA1509_23051} {RNA1509_23051, RNA815_2882.1}

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