TomoSeq data search

Data search

Results for MligTC455_33649

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33649

306

6.37

Mlig455_008707

Neo: -

Age: logFC(26M/2M)=1.164

FOXP4

Mlig455_008707 {REF} {Length: 3872} {Pfam: Forkhead domain [PF00250.20, score=91.2]; FOXP coiled-coil domain [PF16159.7, score=47.8]} {Human: ENSG00000137166, FOXP4, forkhead box P4, [RH, Score=198, Expect=8e-55]} {Mouse: ENSMUSG00000023991, Foxp4, forkhead box P4, [RH, Score=197, Expect=3e-54]; ENSMUSG00000116496, Foxp4, forkhead box P4, [RH, Score=197, Expect=3e-54]} {Dmel: FBgn0262477, FoxP, Forkhead box P, [Score=180, Expect=3e-50]} {Celegans: WBGene00001439, fkh-7, ForKHead transcription factor family, [Score=177, Expect=6e-51]} {Smed: dd_Smed_v6_6316_0_1, dd_Smed_v6_6316_0_1, [RH, Score=107, Expect=2e-24]} {RNA1310_16488} {RNA815_13239}

Cumulative graph for MligTC455_33649

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.248	2.969	0.52268	1.00000
RegionR2	-1.984	2.969	0.99874	1.00000
RegionR3	0.997	2.969	0.34692	0.88194
RegionR4	2.456	2.969	0.03251	0.14378
RegionR5	1.786	2.969	0.08197	0.26662
RegionR6	-0.492	2.969	0.94127	1.00000
RegionR7	1.315	2.969	0.27447	0.90572
RegionR8	-5.326	2.969	0.10404	0.60231

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.469	2.969	0.83908	1.00000
RegenerationR2	3.591	2.969	0.00461	0.10518
RegenerationR3	1.509	2.969	0.23165	0.66629
RegenerationR4	1.124	2.969	0.33417	0.76790
RegenerationR5	1.311	2.969	0.25988	0.69157
RegenerationR6	2.938	2.969	0.02442	0.19481
RegenerationBL	2.258	2.969	0.17609	0.50339
RegenerationTP	1.96	2.969	0.39649	0.82687

Genes with expression patterns similar to MligTC455_33649

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33649	306	6.37	Mlig455_008707	Neo: - Age: logFC(26M/2M)=1.164	FOXP4	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_008707 {REF} {Length: 3872} {Pfam: Forkhead domain [PF00250.20, score=91.2]; FOXP coiled-coil domain [PF16159.7, score=47.8]} {Human: ENSG00000137166, FOXP4, forkhead box P4, [RH, Score=198, Expect=8e-55]} {Mouse: ENSMUSG00000023991, Foxp4, forkhead box P4, [RH, Score=197, Expect=3e-54]; ENSMUSG00000116496, Foxp4, forkhead box P4, [RH, Score=197, Expect=3e-54]} {Dmel: FBgn0262477, FoxP, Forkhead box P, [Score=180, Expect=3e-50]} {Celegans: WBGene00001439, fkh-7, ForKHead transcription factor family, [Score=177, Expect=6e-51]} {Smed: dd_Smed_v6_6316_0_1, dd_Smed_v6_6316_0_1, [RH, Score=107, Expect=2e-24]} {RNA1310_16488} {RNA815_13239}
2.	MligTC455_43035	2650	55.22	Mlig455_014921	Neo: - Age: - Region-enriched R4: 1.106/0.00768		0.969	-	-	-	0.969	-	-	Mlig455_014921 {REF} {Length: 2115} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=50.9]; Tight junction protein, Claudin-like [PF06653.13, score=29.9]; Protein of unknown function (DUF2723) [PF11028.10, score=19.9]} {Dmel: FBgn0013720, pck, pickel, [RH, Score=114, Expect=3e-30]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [RH, Score=175, Expect=8e-54]} {RNA1509_19150, RNA1509_45395} {RNA1310_28058, RNA1509_19150} {RNA1509_19150, RNA815_13774}
3.	MligTC455_50406	1440	30	Mlig455_014792	Neo: - Age: -	ALDH7A1	0.968	-	-	-	0.968	-	-	Mlig455_014792 {REF} {Length: 2916} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=442.0]} {Human: ENSG00000164904, ALDH7A1, aldehyde dehydrogenase 7 family member A1, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000053644, Aldh7a1, aldehyde dehydrogenase family 7, member A1, [RH, Score=650, Expect=0.0]} {Dmel: FBgn0036857, CG9629, [RH, Score=585, Expect=0.0]} {Celegans: WBGene00000115, alh-9, Putative aldehyde dehydrogenase family 7 member A1 homolog, [RH, Score=651, Expect=0.0]} {Smed: dd_Smed_v6_1493_0_1, dd_Smed_v6_1493_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_3431, RNA1509_57714, RNA1509_9575} {RNA1310_12454, RNA1509_57714, RNA1509_9575} {RNA1509_57714, RNA1509_9575, RNA815_2530}
4.	MligTC455_42930	454	9.46	Mlig455_021401	Neo: - Age: Down-Up-Up		0.957	-	-	-	-	0.957	-	Mlig455_021401 {REF} {Length: 2364} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=54.6]} {Smed: dd_Smed_v6_2248_0_1, dd_Smed_v6_2248_0_1, [RH, Score=90.1, Expect=5e-23]} {RNA1509_35535} {RNA1310_33600, RNA1509_35535} {RNA1509_35535, RNA815_19822}
5.	MligTC455_44896	740	15.41	Mlig455_033039	Neo: - Age: -	PGM1	0.957	-	-	-	0.957	-	-	Mlig455_033039 {REF} {Length: 3435} {TRANSSPLICED} {Pfam: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I [PF02878.18, score=107.8]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III [PF02880.18, score=102.4]; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II [PF02879.18, score=61.2]; Phosphoglucomutase/phosphomannomutase, C-terminal domain [PF00408.22, score=26.7]} {Human: ENSG00000079739, PGM1, phosphoglucomutase 1, [RH, Score=691, Expect=0.0]} {Mouse: ENSMUSG00000116466, Pgm1, phosphoglucomutase 1, [RH, Score=692, Expect=0.0]; ENSMUSG00000025791, Pgm1, phosphoglucomutase 1, [RH, Score=692, Expect=0.0]} {Dmel: FBgn0003076, Pgm, phosphoglucose mutase, [RH, Score=683, Expect=0.0]} {Celegans: WBGene00019890, R05F9.6, [RH, Score=642, Expect=0.0]} {Smed: dd_Smed_v6_3503_0_1, dd_Smed_v6_3503_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_20265, RNA1509_25770, RNA1509_5148, RNA1509_53230} {RNA1310_11284, RNA1509_20265, RNA1509_25770, RNA1509_5148, RNA1509_53230} {RNA1509_20265, RNA1509_25770, RNA1509_5148, RNA1509_53230, RNA815_5609}

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