Data search
Results for MligTC455_42930
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42930 | 454 | 9.46 | Mlig455_021401 | Neo: - Age: Down-Up-Up |
Mlig455_021401 {REF} {Length: 2364} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=54.6]} {Smed: dd_Smed_v6_2248_0_1, dd_Smed_v6_2248_0_1, [RH, Score=90.1, Expect=5e-23]} {RNA1509_35535} {RNA1310_33600, RNA1509_35535} {RNA1509_35535, RNA815_19822} |
Cumulative graph for MligTC455_42930
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.147 | 3.494 | 0.92837 | 1.00000 | |
| RegionR2 | 0.145 | 3.494 | 0.85064 | 1.00000 | |
| RegionR3 | -1.018 | 3.494 | 0.14600 | 0.65024 | |
| RegionR4 | 0.245 | 3.494 | 0.74490 | 1.00000 | |
| RegionR5 | -0.279 | 3.494 | 0.66323 | 1.00000 | |
| RegionR6 | 0.408 | 3.494 | 0.52742 | 1.00000 | |
| RegionR7 | 0.328 | 3.494 | 0.66580 | 1.00000 | |
| RegionR8 | 0.023 | 3.494 | 0.98040 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.237 | 3.494 | 0.91368 | 1.00000 | |
| RegenerationR2 | 0.026 | 3.494 | 0.97197 | 1.00000 | |
| RegenerationR3 | 1.065 | 3.494 | 0.18624 | 0.62265 | |
| RegenerationR4 | 0.309 | 3.494 | 0.69252 | 0.95043 | |
| RegenerationR5 | 0.444 | 3.494 | 0.54099 | 0.88085 | |
| RegenerationR6 | 0.947 | 3.494 | 0.19803 | 0.53842 | |
| RegenerationBL | -1.987 | 3.494 | 0.05114 | 0.26044 | |
| RegenerationTP | 0.812 | 3.494 | 0.32388 | 0.76802 |
Genes with expression patterns similar to MligTC455_42930
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42930 | 454 | 9.46 | Mlig455_021401 | Neo: - Age: Down-Up-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021401 {REF} {Length: 2364} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=54.6]} {Smed: dd_Smed_v6_2248_0_1, dd_Smed_v6_2248_0_1, [RH, Score=90.1, Expect=5e-23]} {RNA1509_35535} {RNA1310_33600, RNA1509_35535} {RNA1509_35535, RNA815_19822} | |
| 2. | MligTC455_51455 | 235 | 4.9 | Mlig455_020896 | Neo: - Age: - Region-enriched R2: 2.815/0.01995 |
INTS9 | 0.982 | - | - | - | 0.982 | - | - | Mlig455_020896 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=46.8]; Beta-Casp domain [PF10996.10, score=24.8]} {Human: ENSG00000104299, INTS9, integrator complex subunit 9, [RH, Score=350, Expect=6e-111]} {Mouse: ENSMUSG00000021975, Ints9, integrator complex subunit 9, [RH, Score=341, Expect=2e-107]} {Dmel: FBgn0036570, IntS9, Integrator 9, [RH, Score=308, Expect=2e-95]} {Celegans: WBGene00017608, F19F10.12, [RH, Score=206, Expect=9e-58]} {Smed: dd_Smed_v6_5262_0_1, dd_Smed_v6_5262_0_1, [RH, Score=317, Expect=5e-99]} {RNA1509_13901} {RNA1310_11245.1} {RNA815_21239} |
| 3. | MligTC455_19668 | 814 | 16.96 | Mlig455_048937 | Neo: - Age: - |
METAP2 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_048937 {REF} {Length: 1513} {Pfam: Metallopeptidase family M24 [PF00557.26, score=142.2]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [Score=504, Expect=3e-179]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [Score=501, Expect=9e-178]} {Dmel: FBgn0283478, und, uninitiated, [Score=492, Expect=1e-174]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [Score=486, Expect=2e-172]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [Score=504, Expect=2e-180]} {RNA1509_6431} {RNA1310_15348} {RNA815_5667} |
| 4. | MligTC455_23355 | 380 | 7.91 | Mlig455_047433 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.922/0.03999 Regeneration-upregulated BL: 4.169 Regeneration-enriched BL: 4.169 |
GEMIN5 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032} |
| 5. | MligTC455_31299 | 699 | 14.57 | Mlig455_068122 | Neo: Neoblast, stringent Age: Up-Down-Up Regeneration-upregulated R6: 1.741 Regeneration-enriched R6: 1.741 |
NUP160 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_068122 {REF} {Length: 5376} {Pfam: Nucleoporin Nup120/160 [PF11715.10, score=42.4]} {Human: ENSG00000285358, NUP160, nucleoporin 160, [RH, Score=194, Expect=2e-49]; ENSG00000030066, NUP160, nucleoporin 160, [RH, Score=194, Expect=2e-49]} {Mouse: ENSMUSG00000051329, Nup160, nucleoporin 160, [RH, Score=198, Expect=1e-50]} {Dmel: FBgn0262647, Nup160, Nucleoporin 160kD, [RH, Score=147, Expect=5e-35]} {RNA1509_5873} {RNA1310_964, RNA1509_5873} {RNA1509_5873, RNA815_10041} |
| 6. | MligTC455_33649 | 306 | 6.37 | Mlig455_008707 | Neo: - Age: logFC(26M/2M)=1.164 |
FOXP4 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_008707 {REF} {Length: 3872} {Pfam: Forkhead domain [PF00250.20, score=91.2]; FOXP coiled-coil domain [PF16159.7, score=47.8]} {Human: ENSG00000137166, FOXP4, forkhead box P4, [RH, Score=198, Expect=8e-55]} {Mouse: ENSMUSG00000023991, Foxp4, forkhead box P4, [RH, Score=197, Expect=3e-54]; ENSMUSG00000116496, Foxp4, forkhead box P4, [RH, Score=197, Expect=3e-54]} {Dmel: FBgn0262477, FoxP, Forkhead box P, [Score=180, Expect=3e-50]} {Celegans: WBGene00001439, fkh-7, ForKHead transcription factor family, [Score=177, Expect=6e-51]} {Smed: dd_Smed_v6_6316_0_1, dd_Smed_v6_6316_0_1, [RH, Score=107, Expect=2e-24]} {RNA1310_16488} {RNA815_13239} |
| 7. | MligTC455_47491 | 302 | 6.29 | Mlig455_030531 | Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.489 Region-specific R5: 2.664 Region-enriched R5: 1.755/0.00006 |
TUT7 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_030531 {REF} {Length: 3483} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=36.1]} {Human: ENSG00000083223, TUT7, terminal uridylyl transferase 7, [Score=53.1, Expect=2e-06]} {RNA1509_22764} {RNA1310_6443.1} {RNA815_24098} |
| 8. | MligTC455_15925 | 433 | 9.03 | Mlig455_000967 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.067 Region-enriched R6: 2.167/0.03148 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_000967 {REF} {Length: 2362} {RNA1509_23315} {RNA1310_10319.1, RNA1509_23315} {RNA1509_23315, RNA815_4320.1} | |
| 9. | MligTC455_25124 | 192 | 4 | Mlig455_028759 | Neo: Irradiation Age: - |
TRIM2 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_028759 {REF} {Length: 5021} {Pfam: NHL repeat [PF01436.23, score=39.3]; RING-type zinc-finger [PF13445.8, score=18.7]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=58.2, Expect=4e-08]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=85.9, Expect=5e-17]} {RNA1509_23913} {RNA1310_10840} {RNA815_6531} |
| 10. | MligTC455_26336 | 865 | 18.01 | Mlig455_045204 | Neo: Int S/G2/M Age: - |
DUS3L | 0.953 | - | - | - | 0.953 | - | - | Mlig455_045204 {REF} {Length: 4331} {Pfam: Dihydrouridine synthase (Dus) [PF01207.19, score=169.6]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=23.1]; Exonuclease VII, large subunit [PF02601.17, score=19.7]} {Human: ENSG00000141994, DUS3L, dihydrouridine synthase 3 like, [RH, Score=465, Expect=4e-159]} {Mouse: ENSMUSG00000007603, Dus3l, dihydrouridine synthase 3-like (S. cerevisiae), [RH, Score=459, Expect=1e-153]} {Dmel: FBgn0032819, CG10463, [RH, Score=442, Expect=7e-148]} {Celegans: WBGene00021377, Y37E11B.5, tRNA-dihydrouridine(47) synthase [NAD(P)(+)], [RH, Score=366, Expect=4e-119]} {Smed: dd_Smed_v6_8477_0_1, dd_Smed_v6_8477_0_1, [Score=442, Expect=1e-148]} {RNA1509_51412} {RNA1310_18572.1} {RNA815_9098} |
| 11. | MligTC455_11485 | 67 | 1.39 | Mlig455_071010 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_071010 {REF} {Length: 1261} {NoTransDecoderORF} {RNA1509_50390} {RNA1310_20894} {RNA815_18359} | |
| 12. | MligTC455_34507 | 122 | 2.55 | Mlig455_056674 | Neo: - Age: - |
SLBP | 0.951 | - | - | - | 0.951 | - | - | Mlig455_056674 {REF} {Length: 2076} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.7]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=86.7, Expect=4e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=86.3, Expect=1e-18]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=1e-15]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=67.8, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=100, Expect=4e-24]} {RNA1509_9558} {RNA1310_22526.2, RNA1509_9558} {RNA1509_9558, RNA815_16079} |
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