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Results for MligTC455_33804

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33804 1219 25.40 Mlig455_054283

Neo: -

Age: -

 RBMS3 Mlig455_054283 {REF} {Length: 3671} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=50.5]} {Human: ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=107, Expect=1e-23]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=8e-24]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=107, Expect=3e-24]; ENSMUSG00000039607, Rbms3, RNA binding motif, single stranded interacting protein, [Score=106, Expect=6e-24]; ENSMUSG00000040043, Rbms2, RNA binding motif, single stranded interacting protein 2, [Score=106, Expect=2e-24]} {Dmel: FBgn0052423, shep, alan shepard, [Score=99.4, Expect=3e-21]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=107, Expect=7e-25]} {Smed: dd_Smed_v6_5327_0_1, dd_Smed_v6_5327_0_1, [Score=103, Expect=2e-23]} {RNA1509_8597} {RNA1310_31213.1} {RNA815_7889.1}

Cumulative graph for MligTC455_33804

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.233 4.981 0.77549 1.00000
RegionR2 -0.121 4.981 0.70016 1.00000
RegionR3 -0.135 4.981 0.60331 1.00000
RegionR4 0.802 4.981 0.00935 0.05806
RegionR5 0.415 4.981 0.07118 0.24105
RegionR6 -0.179 4.981 0.50531 1.00000
RegionR7 -0.458 4.981 0.22121 0.84238
RegionR8 -0.557 4.981 0.25027 0.86949

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.486 4.981 0.00898 0.42974
RegenerationR2 -0.277 4.981 0.27678 0.72089
RegenerationR3 -0.358 4.981 0.20729 0.64235
RegenerationR4 -1.043 4.981 0.00037 0.01764
RegenerationR5 -0.704 4.981 0.00678 0.14953
RegenerationR6 -0.181 4.981 0.53189 0.82815
RegenerationBL 0.008 4.981 0.98174 1.00000
RegenerationTP -0.1 4.981 0.81313 1.00000


Genes with expression patterns similar to MligTC455_33804

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33804 1219 25.4 Mlig455_054283

Neo: -

Age: -

 RBMS3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_054283 {REF} {Length: 3671} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=50.5]} {Human: ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=107, Expect=1e-23]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=8e-24]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=107, Expect=3e-24]; ENSMUSG00000039607, Rbms3, RNA binding motif, single stranded interacting protein, [Score=106, Expect=6e-24]; ENSMUSG00000040043, Rbms2, RNA binding motif, single stranded interacting protein 2, [Score=106, Expect=2e-24]} {Dmel: FBgn0052423, shep, alan shepard, [Score=99.4, Expect=3e-21]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=107, Expect=7e-25]} {Smed: dd_Smed_v6_5327_0_1, dd_Smed_v6_5327_0_1, [Score=103, Expect=2e-23]} {RNA1509_8597} {RNA1310_31213.1} {RNA815_7889.1}
2. MligTC455_21374 1762 36.71 Mlig455_022059

Neo: Int S/G2/M

Age: Up-Down-Down

 PRRC2C 0.967 - - - 0.967 - - Mlig455_022059 {REF} {Length: 7495} {TRANSSPLICED} {Pfam: BAT2 N-terminus [PF07001.13, score=78.9]} {Human: ENSG00000117523, PRRC2C, proline rich coiled-coil 2C, [Score=78.6, Expect=1e-13]} {Mouse: ENSMUSG00000040225, Prrc2c, proline-rich coiled-coil 2C, [RH, Score=78.6, Expect=4e-16]} {Smed: dd_Smed_v6_4611_0_1, dd_Smed_v6_4611_0_1, [Score=52.4, Expect=4e-06]} {RNA1509_28000, RNA1509_36897, RNA1509_608} {RNA1310_328.1, RNA1509_28000, RNA1509_36897, RNA1509_608} {RNA1509_28000, RNA1509_36897, RNA1509_608, RNA815_1363.1}
3. MligTC455_46378 582 12.12 Mlig455_040684

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=0.474

 COPS5 0.954 - - - 0.954 - - Mlig455_040684 {REF} {Length: 1700} {TRANSSPLICED} {Pfam: JAB1/Mov34/MPN/PAD-1 ubiquitin protease [PF01398.23, score=100.5]; Cop9 signalosome subunit 5 C-terminal domain [PF18323.3, score=41.9]; Prokaryotic homologs of the JAB domain [PF14464.8, score=20.9]} {Human: ENSG00000121022, COPS5, COP9 signalosome subunit 5, [RH, Score=383, Expect=4e-133]} {Mouse: ENSMUSG00000025917, Cops5, COP9 signalosome subunit 5, [RH, Score=383, Expect=3e-133]} {Dmel: FBgn0027053, CSN5, COP9 signalosome subunit 5, [RH, Score=401, Expect=1e-140]} {Celegans: WBGene00000817, csn-5, COP9 signalosome complex subunit 5, [RH, Score=344, Expect=1e-117]} {Smed: dd_Smed_v6_2781_0_1, dd_Smed_v6_2781_0_1, [RH, Score=355, Expect=2e-122]} {RNA1509_9443} {RNA1310_23567} {RNA815_13412}
4. MligTC455_16286 1029 21.44 Mlig455_067405, Mlig455_069542

Neo: -

Age: -

 CSRNP2 0.953 - - - 0.953 - -

Mlig455_067405 {REF} {Length: 1792} {TRANSSPLICED} {Pfam: Cysteine/serine-rich nuclear protein N-terminus [PF16019.7, score=168.5]} {Human: ENSG00000110925, CSRNP2, cysteine and serine rich nuclear protein 2, [RH, Score=139, Expect=1e-35]} {Mouse: ENSMUSG00000044636, Csrnp2, cysteine-serine-rich nuclear protein 2, [RH, Score=139, Expect=9e-36]} {Dmel: FBgn0261647, Axud1, AXIN1 up-regulated 1, [RH, Score=149, Expect=1e-38]} {Smed: dd_Smed_v6_9797_0_1, dd_Smed_v6_9797_0_1, [RH, Score=149, Expect=6e-39]} {RNA1509_21091} {RNA1310_24252} {RNA815_13620.1}

Mlig455_069542 {REF} {Length: 1793} {TRANSSPLICED} {Pfam: Cysteine/serine-rich nuclear protein N-terminus [PF16019.7, score=168.6]} {Human: ENSG00000110925, CSRNP2, cysteine and serine rich nuclear protein 2, [RH, Score=139, Expect=8e-36]} {Mouse: ENSMUSG00000044636, Csrnp2, cysteine-serine-rich nuclear protein 2, [RH, Score=139, Expect=5e-36]} {Dmel: FBgn0261647, Axud1, AXIN1 up-regulated 1, [RH, Score=149, Expect=6e-39]} {Smed: dd_Smed_v6_9797_0_1, dd_Smed_v6_9797_0_1, [RH, Score=149, Expect=3e-39]} {RNA1509_21091} {RNA1310_24252} {RNA815_13620.1}
5. MligTC455_40121 1489 31.02 Mlig455_017174, Mlig455_048124

Neo: -

Age: -

 CHML, GDI2 0.951 - - - 0.951 - -

Mlig455_017174 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=103.1]} {Human: ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.4, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=2e-21]; ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=95.1, Expect=6e-20]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=114, Expect=2e-26]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=135, Expect=5e-34]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=150, Expect=6e-39]} {RNA1509_19996} {RNA1310_10069.1} {RNA815_9618}

Mlig455_048124 {REF} {Length: 2280} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=102.4]} {Human: ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=102, Expect=4e-22]; ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.8, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=3e-21]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=117, Expect=4e-27]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=144, Expect=9e-37]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=118, Expect=7e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=149, Expect=3e-38]} {RNA1509_15791, RNA1509_19996} {RNA1310_10069.1, RNA1509_15791, RNA1509_19996} {RNA1509_15791, RNA1509_19996, RNA815_9618}

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