TomoSeq data search

Data search

Results for MligTC455_40121

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40121	1489	31.02	Mlig455_017174, Mlig455_048124	Neo: - Age: -	CHML, GDI2	Mlig455_017174 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=103.1]} {Human: ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.4, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=2e-21]; ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=95.1, Expect=6e-20]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=114, Expect=2e-26]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=135, Expect=5e-34]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=150, Expect=6e-39]} {RNA1509_19996} {RNA1310_10069.1} {RNA815_9618} Mlig455_048124 {REF} {Length: 2280} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=102.4]} {Human: ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=102, Expect=4e-22]; ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.8, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=3e-21]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=117, Expect=4e-27]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=144, Expect=9e-37]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=118, Expect=7e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=149, Expect=3e-38]} {RNA1509_15791, RNA1509_19996} {RNA1310_10069.1, RNA1509_15791, RNA1509_19996} {RNA1509_15791, RNA1509_19996, RNA815_9618}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40121

1489

31.02

Mlig455_017174, Mlig455_048124

Neo: -

Age: -

CHML, GDI2

Mlig455_017174 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=103.1]} {Human: ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.4, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=2e-21]; ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=95.1, Expect=6e-20]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=114, Expect=2e-26]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=135, Expect=5e-34]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=150, Expect=6e-39]} {RNA1509_19996} {RNA1310_10069.1} {RNA815_9618}

Mlig455_048124 {REF} {Length: 2280} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=102.4]} {Human: ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=102, Expect=4e-22]; ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.8, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=3e-21]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=117, Expect=4e-27]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=144, Expect=9e-37]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=118, Expect=7e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=149, Expect=3e-38]} {RNA1509_15791, RNA1509_19996} {RNA1310_10069.1, RNA1509_15791, RNA1509_19996} {RNA1509_15791, RNA1509_19996, RNA815_9618}

Cumulative graph for MligTC455_40121

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.385	5.205	0.62945	1.00000
RegionR2	0.151	5.205	0.70927	1.00000
RegionR3	-0.522	5.205	0.11973	0.59855
RegionR4	-0.305	5.205	0.41490	0.74229
RegionR5	0.723	5.205	0.00946	0.05540
RegionR6	-0.165	5.205	0.60992	1.00000
RegionR7	0.258	5.205	0.51416	1.00000
RegionR8	0.247	5.205	0.62335	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.658	5.205	0.52325	1.00000
RegenerationR2	0.476	5.205	0.17589	0.61648
RegenerationR3	0.64	5.205	0.10626	0.51569
RegenerationR4	-0.041	5.205	0.91710	1.00000
RegenerationR5	0.001	5.205	0.99809	1.00000
RegenerationR6	0.613	5.205	0.10686	0.40457
RegenerationBL	-0.767	5.205	0.11524	0.40153
RegenerationTP	-0.542	5.205	0.25351	0.70166

Genes with expression patterns similar to MligTC455_40121

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40121	1489	31.02	Mlig455_017174, Mlig455_048124	Neo: - Age: -	CHML, GDI2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017174 {REF} {Length: 1982} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=103.1]} {Human: ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.4, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=2e-21]; ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=95.1, Expect=6e-20]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=114, Expect=2e-26]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=135, Expect=5e-34]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=150, Expect=6e-39]} {RNA1509_19996} {RNA1310_10069.1} {RNA815_9618} Mlig455_048124 {REF} {Length: 2280} {TRANSSPLICED} {Pfam: GDP dissociation inhibitor [PF00996.20, score=102.4]} {Human: ENSG00000203668, CHML, CHM like, Rab escort protein 2, [Score=102, Expect=4e-22]; ENSG00000057608, GDI2, GDP dissociation inhibitor 2, [Score=99.8, Expect=1e-21]; ENSG00000203879, GDI1, GDP dissociation inhibitor 1, [Score=98.6, Expect=3e-21]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [RH, Score=117, Expect=4e-27]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=144, Expect=9e-37]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=118, Expect=7e-29]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [RH, Score=149, Expect=3e-38]} {RNA1509_15791, RNA1509_19996} {RNA1310_10069.1, RNA1509_15791, RNA1509_19996} {RNA1509_15791, RNA1509_19996, RNA815_9618}
2.	MligTC455_18563	2501	52.1	Mlig455_044894, Mlig455_055555	Neo: - Age: - Region-enriched R5: 1.105/0.00002	AGFG1	1.733	-	0.780	-	0.953	-	-	Mlig455_044894 {REF} {Length: 4251} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=91.3]} {Human: ENSG00000173744, AGFG1, ArfGAP with FG repeats 1, [RH, Score=212, Expect=1e-61]} {Mouse: ENSMUSG00000026159, Agfg1, ArfGAP with FG repeats 1, [RH, Score=212, Expect=8e-62]} {Dmel: FBgn0020304, drongo, [RH, Score=180, Expect=4e-50]} {Celegans: WBGene00012359, W09D10.1, [Score=88.2, Expect=2e-18]} {Smed: dd_Smed_v6_4742_0_1, dd_Smed_v6_4742_0_1, [RH, Score=168, Expect=1e-46]} {RNA1509_15638} {RNA1310_11623} {RNA815_14183} Mlig455_055555 {REF} {Length: 4470} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=91.3]} {Human: ENSG00000173744, AGFG1, ArfGAP with FG repeats 1, [RH, Score=213, Expect=4e-62]} {Mouse: ENSMUSG00000026159, Agfg1, ArfGAP with FG repeats 1, [RH, Score=213, Expect=3e-62]} {Dmel: FBgn0020304, drongo, [RH, Score=180, Expect=5e-50]} {Celegans: WBGene00012359, W09D10.1, [Score=88.2, Expect=2e-18]} {Smed: dd_Smed_v6_4742_0_1, dd_Smed_v6_4742_0_1, [RH, Score=168, Expect=1e-46]} {RNA1509_11921, RNA1509_15638, RNA1509_19430, RNA1509_32655, RNA1509_40906, RNA1509_52956} {RNA1310_11623, RNA1509_11921, RNA1509_15638, RNA1509_19430, RNA1509_32655, RNA1509_40906, RNA1509_52956} {RNA1509_11921, RNA1509_15638, RNA1509_19430, RNA1509_32655, RNA1509_40906, RNA1509_52956, RNA815_14183}
3.	MligTC455_25218	1025	21.35	Mlig455_021728	Neo: - Age: -	APC	1.665	-	-	0.709	0.956	-	-	Mlig455_021728 {REF} {Length: 7056} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=36.0]; SAMP Motif [PF05924.13, score=24.0]} {Human: ENSG00000134982, APC, APC, WNT signaling pathway regulator, [RH, Score=284, Expect=4e-76]; ENSG00000115266, APC2, APC2, WNT signaling pathway regulator, [RH, Score=270, Expect=4e-72]} {Mouse: ENSMUSG00000005871, Apc, adenomatosis polyposis coli, [RH, Score=283, Expect=6e-76]; ENSMUSG00000020135, Apc2, adenomatosis polyposis coli 2, [RH, Score=272, Expect=8e-73]} {Dmel: FBgn0015589, Apc, APC-like, [RH, Score=265, Expect=2e-70]} {Celegans: WBGene00000156, apr-1, Adenomatous polyposis coli protein-related protein 1, [RH, Score=124, Expect=6e-28]} {Smed: dd_Smed_v6_6966_0_1, dd_Smed_v6_6966_0_1, [RH, Score=235, Expect=5e-62]} {RNA1509_26796, RNA1509_3590} {RNA1310_116.2, RNA1509_26796} {RNA1509_26796, RNA815_4707}
4.	MligTC455_49128	1037	21.6	Mlig455_048793	Neo: - Age: - Region-enriched R5: 2.167/0.01924		0.958	-	-	0.958	-	-	-	Mlig455_048793 {REF} {Length: 901} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=23.5]} {Dmel: FBgn0035469, CG14977, [RH, Score=48.9, Expect=1e-08]} {RNA1509_30812, RNA1509_40607} {RNA1310_29229, RNA1509_30812, RNA1509_40607} {RNA1509_30812, RNA1509_40607, RNA815_11630.2}
5.	MligTC455_33804	1219	25.4	Mlig455_054283	Neo: - Age: -	RBMS3	0.951	-	-	-	0.951	-	-	Mlig455_054283 {REF} {Length: 3671} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=50.5]} {Human: ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=107, Expect=1e-23]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=8e-24]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=107, Expect=3e-24]; ENSMUSG00000039607, Rbms3, RNA binding motif, single stranded interacting protein, [Score=106, Expect=6e-24]; ENSMUSG00000040043, Rbms2, RNA binding motif, single stranded interacting protein 2, [Score=106, Expect=2e-24]} {Dmel: FBgn0052423, shep, alan shepard, [Score=99.4, Expect=3e-21]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=107, Expect=7e-25]} {Smed: dd_Smed_v6_5327_0_1, dd_Smed_v6_5327_0_1, [Score=103, Expect=2e-23]} {RNA1509_8597} {RNA1310_31213.1} {RNA815_7889.1}