Data search
Results for MligTC455_33857
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33857 | 19 | 0.40 | Mlig455_045745 | Neo: - Age: Up-Down-Down |
SLC47A1 | Mlig455_045745 {REF} {Length: 4505} {Pfam: MatE [PF01554.20, score=104.3]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=155, Expect=3e-40]} {Mouse: ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [Score=174, Expect=8e-47]} {Smed: dd_Smed_v6_11376_0_1, dd_Smed_v6_11376_0_1, [Score=205, Expect=1e-58]} {RNA1310_43550.1} {RNA815_41245} |
Cumulative graph for MligTC455_33857
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.579 | 0.81 | 1.00000 | 1.00000 | |
| RegionR2 | 3.989 | 0.81 | 0.07998 | 0.34656 | |
| RegionR3 | 0.299 | 0.81 | 0.53099 | 1.00000 | |
| RegionR4 | -2.753 | 0.81 | 1.00000 | 1.00000 | |
| RegionR5 | 0.889 | 0.81 | 0.90627 | 1.00000 | |
| RegionR6 | -1.893 | 0.81 | 0.99955 | 1.00000 | |
| RegionR7 | -0.995 | 0.81 | 1.00000 | 1.00000 | |
| RegionR8 | 5.043 | 0.81 | 0.01802 | 0.26134 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.401 | 0.81 | 1.00000 | 1.00000 | |
| RegenerationR2 | -2.218 | 0.81 | 0.49233 | 0.86842 | |
| RegenerationR3 | 0.679 | 0.81 | 0.78247 | 0.97636 | |
| RegenerationR4 | 1.087 | 0.81 | 0.69964 | 0.95355 | |
| RegenerationR5 | 0.507 | 0.81 | 0.81472 | 0.99292 | |
| RegenerationR6 | 3.675 | 0.81 | 0.35797 | 0.70285 | |
| RegenerationBL | -0.94 | 0.81 | 0.99960 | 1.00000 | |
| RegenerationTP | -1.799 | 0.81 | 0.99973 | 1.00000 |
Genes with expression patterns similar to MligTC455_33857
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33857 | 19 | 0.4 | Mlig455_045745 | Neo: - Age: Up-Down-Down |
SLC47A1 | 3 | 1.000 | 1.000 | - | - | 1.000 | - | Mlig455_045745 {REF} {Length: 4505} {Pfam: MatE [PF01554.20, score=104.3]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=155, Expect=3e-40]} {Mouse: ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [Score=174, Expect=8e-47]} {Smed: dd_Smed_v6_11376_0_1, dd_Smed_v6_11376_0_1, [Score=205, Expect=1e-58]} {RNA1310_43550.1} {RNA815_41245} |
| 2. | MligTC455_20118 | 473 | 9.86 | Mlig455_004413, Mlig455_037246 | Neo: - Age: - Region-enriched R5: 1.095/0.02037 |
UPRT | 1.781 | 0.823 | - | - | - | 0.958 | - | Mlig455_004413 {REF} {Length: 2779} {TRANSSPLICED} {Pfam: Uracil phosphoribosyltransferase [PF14681.8, score=131.9]} {Human: ENSG00000094841, UPRT, uracil phosphoribosyltransferase homolog, [Score=211, Expect=8e-67]} {Mouse: ENSMUSG00000073016, Uprt, uracil phosphoribosyltransferase, [Score=216, Expect=6e-69]} {Dmel: FBgn0035639, kri, krishah, [Score=197, Expect=3e-62]} {Celegans: WBGene00008131, C47B2.2, [RH, Score=188, Expect=4e-59]} {Smed: dd_Smed_v6_6546_0_1, dd_Smed_v6_6546_0_1, [Score=206, Expect=3e-66]} {RNA1509_28661} {RNA1310_30463.1} {RNA815_13705} Mlig455_037246 {REF} {Length: 1949} {NoTransDecoderORF} {RNA1509_37793} {RNA1310_21553, RNA1509_37793} {RNA1509_37793, RNA815_29701} |
| 3. | MligTC455_09184 | 172 | 3.59 | Mlig455_049490 | Neo: - Age: Up-Down-Up Region-enriched R6: 2.250/0.01050 |
FZD10 | 1.699 | 0.730 | - | - | - | 0.969 | - | Mlig455_049490 {REF} {Length: 3141} {Pfam: Frizzled/Smoothened family membrane region [PF01534.19, score=284.4]; Fz domain [PF01392.24, score=71.1]} {Human: ENSG00000111432, FZD10, frizzled class receptor 10, [Score=304, Expect=2e-94]; ENSG00000163251, FZD5, frizzled class receptor 5, [Score=294, Expect=1e-90]; ENSG00000188763, FZD9, frizzled class receptor 9, [Score=290, Expect=3e-89]} {Mouse: ENSMUSG00000049551, Fzd9, frizzled class receptor 9, [Score=308, Expect=3e-96]; ENSMUSG00000081683, Fzd10, frizzled class receptor 10, [Score=301, Expect=2e-93]; ENSMUSG00000045005, Fzd5, frizzled class receptor 5, [Score=295, Expect=3e-91]} {Dmel: FBgn0001085, fz, frizzled, [Score=231, Expect=1e-67]} {Celegans: WBGene00000478, cfz-2, Frizzled-2, [Score=238, Expect=5e-70]} {Smed: dd_Smed_v6_11650_0_1, dd_Smed_v6_11650_0_1, [Score=294, Expect=2e-90]} {RNA1509_26552} {RNA1310_10390, RNA1509_26552} {RNA1509_26552, RNA815_21631} |
| 4. | MligTC455_49932 | 27 | 0.57 | Mlig455_067660 | Neo: - Age: - Region-enriched R2: 5.207/0.00812 |
0.97 | - | 0.970 | - | - | - | - | Mlig455_067660 {REF} {Length: 2168} {RNA1310_116606} | |
| 5. | MligTC455_43536 | 47 | 0.98 | Mlig455_066037 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.699 Region-enriched R4: 4.380/0.03075 |
PAPSS2 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_066037 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: ATP-sulfurylase [PF01747.19, score=146.0]; PUA-like domain [PF14306.8, score=85.1]} {Human: ENSG00000198682, PAPSS2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [Score=317, Expect=2e-104]; ENSG00000138801, PAPSS1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [Score=314, Expect=5e-103]} {Mouse: ENSMUSG00000024899, Papss2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [Score=316, Expect=6e-104]; ENSMUSG00000028032, Papss1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [Score=313, Expect=2e-103]} {Dmel: FBgn0020389, Papss, PAPS synthetase, [Score=305, Expect=6e-100]} {Celegans: WBGene00004091, pps-1, 3'-Phosphoadenosine 5'-Phosphosulfate Synthetase, [Score=290, Expect=8e-94]} {Smed: dd_Smed_v6_2536_0_1, dd_Smed_v6_2536_0_1, [Score=308, Expect=2e-101]} {RNA1509_2391} {RNA1310_5399} {RNA815_4222.1} |
| 6. | MligTC455_44371 | 28 | 0.59 | Mlig455_028921 | Neo: - Age: - |
0.962 | 0.962 | - | - | - | - | - | Mlig455_028921 {REF} {Length: 1974} {RNA1509_25325} {RNA1310_28229.1, RNA1509_25325} {RNA1509_25325, RNA815_13844} | |
| 7. | MligTC455_53222 | 78 | 1.63 | Mlig455_048985, Mlig455_049001 | Neo: - Age: - Region-enriched R5: 4.090/0.01265 |
0.962 | 0.962 | - | - | - | - | - | Mlig455_048985 {REF} {Length: 3401} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_5372} {RNA1310_83.1} {RNA815_40.1} Mlig455_049001 {REF} {Length: 3256} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_5372} {RNA1310_87213} {RNA815_40.1} |
|
| 8. | MligTC455_14289 | 27 | 0.57 | Mlig455_035606 | Neo: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_035606 {REF} {Length: 1495} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.9]} {RNA1509_1178} {RNA1310_13731} {RNA815_4445} | |
| 9. | MligTC455_24247 | 69 | 1.44 | Mlig455_029876 | Neo: Irradiation Age: logFC(26M/2M)=0.275 Region-enriched R5: 4.109/0.00096 |
CAPN3 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_029876 {REF} {Length: 2706} {Pfam: Calpain family cysteine protease [PF00648.23, score=355.3]; Calpain large subunit, domain III [PF01067.24, score=126.1]; EF hand [PF00036.34, score=44.1]; EF-hand domain [PF13405.8, score=34.1]; EF-hand domain pair [PF13499.8, score=27.9]; EF-hand domain pair [PF13833.8, score=23.6]; EF hand [PF13202.8, score=19.3]} {Human: ENSG00000092529, CAPN3, calpain 3, [Score=516, Expect=2e-173]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [Score=513, Expect=2e-172]; ENSMUSG00000031981, Capn9, calpain 9, [Score=488, Expect=3e-163]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=523, Expect=6e-174]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=355, Expect=1e-111]} {Smed: dd_Smed_v6_1752_0_3, dd_Smed_v6_1752_0_3, [Score=677, Expect=0.0]} {RNA1509_24802} {RNA1310_6917.1} {RNA815_2052.1} |
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