TomoSeq data search

Data search

Results for MligTC455_43536

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43536

47

0.98

Mlig455_066037

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.699

Region-enriched R4: 4.380/0.03075

PAPSS2

Mlig455_066037 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: ATP-sulfurylase [PF01747.19, score=146.0]; PUA-like domain [PF14306.8, score=85.1]} {Human: ENSG00000198682, PAPSS2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [Score=317, Expect=2e-104]; ENSG00000138801, PAPSS1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [Score=314, Expect=5e-103]} {Mouse: ENSMUSG00000024899, Papss2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [Score=316, Expect=6e-104]; ENSMUSG00000028032, Papss1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [Score=313, Expect=2e-103]} {Dmel: FBgn0020389, Papss, PAPS synthetase, [Score=305, Expect=6e-100]} {Celegans: WBGene00004091, pps-1, 3'-Phosphoadenosine 5'-Phosphosulfate Synthetase, [Score=290, Expect=8e-94]} {Smed: dd_Smed_v6_2536_0_1, dd_Smed_v6_2536_0_1, [Score=308, Expect=2e-101]} {RNA1509_2391} {RNA1310_5399} {RNA815_4222.1}

Cumulative graph for MligTC455_43536

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.822	1.503	1.00000	1.00000
RegionR2	-3.488	1.503	0.98809	1.00000
RegionR3	1.091	1.503	0.36816	0.90281
RegionR4	4.38	1.503	0.00404	0.03075
RegionR5	1.527	1.503	0.18701	0.46845
RegionR6	1.277	1.503	0.32436	0.91361
RegionR7	-3.424	1.503	1.00000	1.00000
RegionR8	-3.185	1.503	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.726	1.503	1.00000	1.00000
RegenerationR2	-0.562	1.503	0.74559	0.97180
RegenerationR3	-3.346	1.503	0.00084	0.04495
RegenerationR4	-2.485	1.503	0.01063	0.15651
RegenerationR5	-1.082	1.503	0.13397	0.54225
RegenerationR6	-1.262	1.503	0.10521	0.40197
RegenerationBL	-3.151	1.503	1.00000	1.00000
RegenerationTP	-1.854	1.503	1.00000	1.00000

Genes with expression patterns similar to MligTC455_43536

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43536	47	0.98	Mlig455_066037	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.699 Region-enriched R4: 4.380/0.03075	PAPSS2	4	1.000	-	1.000	-	1.000	1.000	Mlig455_066037 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: ATP-sulfurylase [PF01747.19, score=146.0]; PUA-like domain [PF14306.8, score=85.1]} {Human: ENSG00000198682, PAPSS2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [Score=317, Expect=2e-104]; ENSG00000138801, PAPSS1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [Score=314, Expect=5e-103]} {Mouse: ENSMUSG00000024899, Papss2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [Score=316, Expect=6e-104]; ENSMUSG00000028032, Papss1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [Score=313, Expect=2e-103]} {Dmel: FBgn0020389, Papss, PAPS synthetase, [Score=305, Expect=6e-100]} {Celegans: WBGene00004091, pps-1, 3'-Phosphoadenosine 5'-Phosphosulfate Synthetase, [Score=290, Expect=8e-94]} {Smed: dd_Smed_v6_2536_0_1, dd_Smed_v6_2536_0_1, [Score=308, Expect=2e-101]} {RNA1509_2391} {RNA1310_5399} {RNA815_4222.1}
2.	MligTC455_38440	283	5.89	Mlig455_030244	Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.790 Region-enriched R4: 4.854/0.00001 Region-enriched R3: 2.903/0.00805	PISD	1.771	0.806	-	-	-	-	0.965	Mlig455_030244 {REF} {Length: 2464} {Pfam: Phosphatidylserine decarboxylase [PF02666.17, score=105.9]} {Human: ENSG00000241878, PISD, phosphatidylserine decarboxylase, [RH, Score=178, Expect=1e-54]} {Mouse: ENSMUSG00000023452, Pisd, phosphatidylserine decarboxylase, [RH, Score=173, Expect=6e-53]} {Dmel: FBgn0026576, CG5991, [Score=137, Expect=2e-37]} {Celegans: WBGene00015159, psd-1, Phosphatidylserine decarboxylase proenzyme, mitochondrial Phosphatidylserine decarboxylase beta chain Phosphatidylserine decarboxylase alpha chain, [Score=116, Expect=2e-30]} {Smed: dd_Smed_v6_10310_0_2, dd_Smed_v6_10310_0_2, [Score=169, Expect=2e-50]} {RNA1509_28822} {RNA1310_18146} {RNA815_8466}
3.	MligTC455_14289	27	0.57	Mlig455_035606	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.848		0.99	-	-	-	-	0.990	-	Mlig455_035606 {REF} {Length: 1495} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.9]} {RNA1509_1178} {RNA1310_13731} {RNA815_4445}
4.	MligTC455_44742	25	0.51	Mlig455_058971	Neo: - Age: logFC(26M/2M)=0.846		0.99	-	-	-	-	-	0.990	Mlig455_058971 {REF} {Length: 2351} {RNA1310_20861} {RNA815_10446}
5.	MligTC455_16290	424	8.83	Mlig455_012500, Mlig455_012589	Neo: - Age: logFC(26M/2M)=-0.374 Region-enriched R5: 3.298/0.00068 Region-enriched R4: 3.099/0.03444	SLC29A1	0.98	-	-	-	-	-	0.980	Mlig455_012500 {REF} {Length: 3324} {Pfam: Nucleoside transporter [PF01733.20, score=230.1]} {Human: ENSG00000112759, SLC29A1, solute carrier family 29 member 1 (Augustine blood group), [Score=153, Expect=1e-40]; ENSG00000198246, SLC29A3, solute carrier family 29 member 3, [Score=148, Expect=1e-38]} {Mouse: ENSMUSG00000023942, Slc29a1, solute carrier family 29 (nucleoside transporters), member 1, [Score=150, Expect=6e-40]; ENSMUSG00000024891, Slc29a2, solute carrier family 29 (nucleoside transporters), member 2, [Score=143, Expect=4e-37]} {Dmel: FBgn0263916, Ent2, Equilibrative nucleoside transporter 2, [RH, Score=264, Expect=1e-82]} {Celegans: WBGene00001320, ent-1, Equilibrative Nucleoside Transporter; Equilibrative nucleoside transporter 1, [RH, Score=240, Expect=6e-74]} {Smed: dd_Smed_v6_6848_0_1, dd_Smed_v6_6848_0_1, [Score=153, Expect=2e-41]} {RNA1509_15022, RNA1509_52896} {RNA1310_8593.2, RNA1509_15022, RNA1509_52896} {RNA1509_15022, RNA1509_52896, RNA815_5676.1} Mlig455_012589 {REF} {Length: 3121} {Pfam: Nucleoside transporter [PF01733.20, score=230.1]} {Human: ENSG00000112759, SLC29A1, solute carrier family 29 member 1 (Augustine blood group), [Score=153, Expect=1e-40]; ENSG00000198246, SLC29A3, solute carrier family 29 member 3, [Score=148, Expect=1e-38]} {Mouse: ENSMUSG00000023942, Slc29a1, solute carrier family 29 (nucleoside transporters), member 1, [Score=150, Expect=6e-40]; ENSMUSG00000024891, Slc29a2, solute carrier family 29 (nucleoside transporters), member 2, [Score=143, Expect=4e-37]} {Dmel: FBgn0263916, Ent2, Equilibrative nucleoside transporter 2, [RH, Score=264, Expect=1e-82]} {Celegans: WBGene00001320, ent-1, Equilibrative Nucleoside Transporter; Equilibrative nucleoside transporter 1, [RH, Score=240, Expect=6e-74]} {Smed: dd_Smed_v6_6848_0_1, dd_Smed_v6_6848_0_1, [Score=153, Expect=2e-41]} {RNA1509_15022} {RNA1310_8593.2} {RNA815_5676.1}
6.	MligTC455_13714	219	4.55	Mlig455_039476	Neo: - Age: - Region-enriched R4: 5.355/0.00070 Region-enriched R5: 3.269/0.00973		0.977	-	-	-	-	-	0.977	Mlig455_039476 {REF} {Length: 684} {NoTransDecoderORF} {RNA1509_296, RNA1509_36260, RNA1509_3658} {RNA1310_1675.1, RNA1509_296, RNA1509_3658} {RNA1509_296, RNA1509_3658, RNA815_2514.1}
7.	MligTC455_12625	23	0.47	Mlig455_043716	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_043716 {REF} {Length: 1192} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=19.4]} {RNA1310_40526.1} {RNA815_22977}
8.	MligTC455_12626	23	0.47	Mlig455_043802	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_043802 {REF} {Length: 1192} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=19.4]} {RNA1310_40526.1} {RNA815_22977}
9.	MligTC455_33857	19	0.4	Mlig455_045745	Neo: - Age: Up-Down-Down	SLC47A1	0.963	-	-	-	-	0.963	-	Mlig455_045745 {REF} {Length: 4505} {Pfam: MatE [PF01554.20, score=104.3]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=155, Expect=3e-40]} {Mouse: ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [Score=174, Expect=8e-47]} {Smed: dd_Smed_v6_11376_0_1, dd_Smed_v6_11376_0_1, [Score=205, Expect=1e-58]} {RNA1310_43550.1} {RNA815_41245}
10.	MligTC455_11295	996	20.74	Mlig455_007322, Mlig455_068328	Neo: - Age: Down-Up-Down	MTHFR	0.956	-	-	-	-	-	0.956	Mlig455_007322 {REF} {Length: 3390} {Pfam: Methylenetetrahydrofolate reductase [PF02219.19, score=342.2]} {Human: ENSG00000177000, MTHFR, methylenetetrahydrofolate reductase, [Score=642, Expect=0.0]} {Mouse: ENSMUSG00000029009, Mthfr, methylenetetrahydrofolate reductase, [Score=643, Expect=0.0]} {Dmel: FBgn0036157, CG7560, [Score=85.5, Expect=1e-17]} {Celegans: WBGene00015512, mthf-1, Probable methylenetetrahydrofolate reductase, [Score=538, Expect=0.0]} {Smed: dd_Smed_v6_8918_0_1, dd_Smed_v6_8918_0_1, [Score=650, Expect=0.0]} {RNA1509_10965, RNA1509_9760} {RNA1310_13357, RNA1509_10965} {RNA1509_10965, RNA815_21219} Mlig455_068328 {REF} {Length: 5336} {Pfam: Methylenetetrahydrofolate reductase [PF02219.19, score=343.2]} {Human: ENSG00000177000, MTHFR, methylenetetrahydrofolate reductase, [Score=640, Expect=0.0]} {Mouse: ENSMUSG00000029009, Mthfr, methylenetetrahydrofolate reductase, [Score=642, Expect=0.0]} {Dmel: FBgn0036157, CG7560, [Score=85.5, Expect=1e-17]} {Celegans: WBGene00015512, mthf-1, Probable methylenetetrahydrofolate reductase, [Score=537, Expect=0.0]} {Smed: dd_Smed_v6_8918_0_1, dd_Smed_v6_8918_0_1, [Score=653, Expect=0.0]} {RNA1509_27425, RNA1509_9760} {RNA1310_13357, RNA1509_27425, RNA1509_9760} {RNA1509_27425, RNA1509_9760, RNA815_21219}
11.	MligTC455_02395	15	0.31	Mlig455_021031, Mlig455_021068	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_021031 {REF} {Length: 746} {RNA1310_51183} {RNA815_27275} Mlig455_021068 {REF} {Length: 1094} {RNA1310_51183} {RNA815_27275}
12.	MligTC455_11804	40	0.84	Mlig455_049994, Mlig455_050022	Neo: - Age: Up-Down-Up		0.955	-	-	-	-	-	0.955	Mlig455_049994 {REF} {Length: 2541} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155} Mlig455_050022 {REF} {Length: 1815} {TRANSSPLICED} {RNA1310_33428} {RNA815_20155}
13.	MligTC455_15518	65	1.35	Mlig455_008564	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_008564 {REF} {Length: 1590} {TRANSSPLICED} {RNA1509_49619} {RNA1310_9836} {RNA815_16395}
14.	MligTC455_25325	264	5.5	Mlig455_060516	Neo: - Age: logFC(26M/2M)=-0.593 Region-enriched R3: 3.266/0.00002 Region-enriched R5: 1.829/0.04066	MYRF	0.954	-	-	-	-	-	0.954	Mlig455_060516 {REF} {Length: 3746} {Pfam: NDT80 / PhoG like DNA-binding family [PF05224.14, score=59.4]; Myelin regulatory factor ICA domain [PF13887.8, score=56.4]; Chaperone of endosialidase [PF13884.8, score=25.1]} {Human: ENSG00000124920, MYRF, myelin regulatory factor, [Score=241, Expect=1e-65]} {Mouse: ENSMUSG00000036098, Myrf, myelin regulatory factor, [Score=236, Expect=2e-64]} {Dmel: FBgn0034985, CG3328, [Score=235, Expect=2e-63]} {Celegans: WBGene00008999, myrf-2, Myelin regulatory factor related, [RH, Score=156, Expect=9e-39]} {RNA1509_20418} {RNA1310_4590.2, RNA1509_20418} {RNA1509_20418, RNA815_1404}
15.	MligTC455_11055	13	0.27	Mlig455_021220	Neo: - Age: -	ZFP36L1	0.952	-	-	-	-	-	0.952	Mlig455_021220 {REF} {Length: 2097} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=58.8]; Zinc finger domain [PF18345.3, score=35.7]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.0]; CCCH-type zinc finger [PF18044.3, score=28.1]} {Human: ENSG00000185650, ZFP36L1, ZFP36 ring finger protein like 1, [Score=67.8, Expect=2e-14]; ENSG00000152518, ZFP36L2, ZFP36 ring finger protein like 2, [Score=66.2, Expect=9e-14]} {Mouse: ENSMUSG00000059334, Zfp36l3, zinc finger protein 36, C3H type-like 3, [Score=69.7, Expect=4e-15]; ENSMUSG00000021127, Zfp36l1, zinc finger protein 36, C3H type-like 1, [Score=68.6, Expect=7e-15]} {Dmel: FBgn0011837, Tis11, Tis11 zinc finger protein, [Score=69.3, Expect=4e-15]} {Celegans: WBGene00007961, C35D6.4, [RH, Score=66.6, Expect=6e-15]} {RNA1310_91211} {RNA815_52611}
16.	MligTC455_11294	430	8.95	Mlig455_068327	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_068327 {REF} {Length: 1267} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=21.5]} {RNA1509_10965} {RNA1310_87215.1} {RNA815_44952}

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