Data search


search
Exact
Search

Results for MligTC455_33901

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33901 15 0.32 Mlig455_051784

Neo: -

Age: -

Mlig455_051784 {REF} {Length: 2208} {RNA1310_94009}

Cumulative graph for MligTC455_33901

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.007 0.716 0.99993 1.00000
RegionR2 1.692 0.716 0.99988 1.00000
RegionR3 -0.634 0.716 0.99993 1.00000
RegionR4 -1.484 0.716 0.99976 1.00000
RegionR5 -1.424 0.716 0.99977 1.00000
RegionR6 -0.511 0.716 0.99993 1.00000
RegionR7 1.162 0.716 0.99992 1.00000
RegionR8 1.206 0.716 0.99993 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.151 0.716 0.99992 1.00000
RegenerationR2 3.019 0.716 0.01531 0.20285
RegenerationR3 4.339 0.716 0.01730 0.24007
RegenerationR4 3.277 0.716 0.03395 0.29731
RegenerationR5 4.611 0.716 0.00364 0.10769
RegenerationR6 0.796 0.716 0.99987 1.00000
RegenerationBL 3.167 0.716 0.06492 0.29641
RegenerationTP 3.169 0.716 0.11980 0.52885


Genes with expression patterns similar to MligTC455_33901

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33901 15 0.32 Mlig455_051784

Neo: -

Age: -

2 - - - - 1.000 1.000 Mlig455_051784 {REF} {Length: 2208} {RNA1310_94009}
2. MligTC455_32870 33 0.69 Mlig455_028340

Neo: -

Age: -

PWWP2A 0.991 - - - - 0.991 - Mlig455_028340 {REF} {Length: 2944} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=41.1]} {Human: ENSG00000170234, PWWP2A, PWWP domain containing 2A, [Score=65.9, Expect=1e-10]} {Mouse: ENSMUSG00000060260, Pwwp2b, PWWP domain containing 2B, [RH, Score=65.9, Expect=8e-11]; ENSMUSG00000110798, Pwwp2b, PWWP domain containing 2B, [RH, Score=65.9, Expect=8e-11]} {Smed: dd_Smed_v6_11117_0_1, dd_Smed_v6_11117_0_1, [RH, Score=68.9, Expect=3e-12]} {RNA1509_11193, RNA1509_51578} {RNA1310_14175, RNA1509_11193, RNA1509_51578} {RNA1509_11193, RNA1509_51578, RNA815_5362}
3. MligTC455_52521 39 0.81 Mlig455_055681

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_055681 {REF} {Length: 2193} {TRANSSPLICED} {RNA1509_11978} {RNA1310_20184, RNA1509_11978} {RNA1509_11978, RNA815_37003}
4. MligTC455_53098 10 0.2 Mlig455_000210

Neo: -

Age: -

0.96 - - - - 0.960 - Mlig455_000210 {REF} {Length: 1856} {NoTransDecoderORF} {RNA1509_35494} {RNA1310_44521} {RNA815_38154}
5. MligTC455_09960 34 0.7 Mlig455_040438

Neo: -

Age: -

0.953 - - - - - 0.953 Mlig455_040438 {REF} {Length: 640} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_77567}
6. MligTC455_52219 214 4.45 Mlig455_000626

Neo: -

Age: logFC(26M/2M)=-0.288

0.953 - - - - 0.953 - Mlig455_000626 {REF} {Length: 1967} {TRANSSPLICED} {RNA1509_39878} {RNA1310_38967} {RNA815_5599}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA