TomoSeq data search

Data search

Results for MligTC455_33918

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33918

709

14.78

Mlig455_020264

Neo: -

Age: logFC(26M/2M)=0.263

Mlig455_020264 {REF} {Length: 2712} {RNA1509_10971} {RNA1310_14564, RNA1509_10971} {RNA1509_10971, RNA815_20941}

Cumulative graph for MligTC455_33918

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.909	4.14	0.05084	0.53010
RegionR2	-0.22	4.14	0.71744	1.00000
RegionR3	0.04	4.14	0.94109	1.00000
RegionR4	0.395	4.14	0.50027	0.82696
RegionR5	0.556	4.14	0.23362	0.54176
RegionR6	-0.48	4.14	0.36113	0.94395
RegionR7	-0.075	4.14	0.90022	1.00000
RegionR8	-2.125	4.14	0.01369	0.22597

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.006	4.14	0.19184	0.93062
RegenerationR2	0.483	4.14	0.40187	0.81551
RegenerationR3	0.209	4.14	0.73852	0.96039
RegenerationR4	-0.228	4.14	0.71277	0.95842
RegenerationR5	-0.521	4.14	0.38022	0.78686
RegenerationR6	0.345	4.14	0.59806	0.86754
RegenerationBL	0.535	4.14	0.45735	0.82503
RegenerationTP	-0.008	4.14	0.99045	1.00000

Genes with expression patterns similar to MligTC455_33918

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33918	709	14.78	Mlig455_020264	Neo: - Age: logFC(26M/2M)=0.263		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020264 {REF} {Length: 2712} {RNA1509_10971} {RNA1310_14564, RNA1509_10971} {RNA1509_10971, RNA815_20941}
2.	MligTC455_30788	832	17.33	Mlig455_057272	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=0.411	EIF2S2	0.959	-	-	0.959	-	-	-	Mlig455_057272 {REF} {Length: 2178} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=133.8]} {Human: ENSG00000125977, EIF2S2, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=251, Expect=1e-82]} {Mouse: ENSMUSG00000074656, Eif2s2, eukaryotic translation initiation factor 2, subunit 2 (beta), [RH, Score=254, Expect=3e-84]} {Dmel: FBgn0004926, eIF2beta, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=240, Expect=4e-79]} {Celegans: WBGene00010560, eif-2beta, Eukaryotic translation initiation factor 2 subunit 2, [RH, Score=216, Expect=1e-70]} {Smed: dd_Smed_v6_3764_0_1, dd_Smed_v6_3764_0_1, [RH, Score=182, Expect=1e-57]} {RNA1509_2020} {RNA1310_27097} {RNA815_5088.1}
3.	MligTC455_51686	539	11.24	Mlig455_001447	Neo: Int S/G2/M Age: -	USP30	0.958	-	-	0.958	-	-	-	Mlig455_001447 {REF} {Length: 2410} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=140.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=35.6]} {Human: ENSG00000135093, USP30, ubiquitin specific peptidase 30, [RH, Score=105, Expect=6e-24]} {Mouse: ENSMUSG00000029592, Usp30, ubiquitin specific peptidase 30, [RH, Score=105, Expect=6e-24]} {Dmel: FBgn0052479, Usp10, Ubiquitin specific protease 10, [Score=89.4, Expect=1e-18]} {Celegans: WBGene00022052, Y67D2.2, Ubiquitin carboxyl-terminal hydrolase, [RH, Score=77.8, Expect=3e-15]} {Smed: dd_Smed_v6_9523_0_1, dd_Smed_v6_9523_0_1, [RH, Score=78.6, Expect=7e-16]} {RNA1509_18664, RNA1509_20794} {RNA1310_18122, RNA1509_18664, RNA1509_20794} {RNA1509_18664, RNA1509_20794, RNA815_10320}
4.	MligTC455_27948	239	4.98	Mlig455_049429	Neo: - Age: -	BCAT2	0.956	-	-	0.956	-	-	-	Mlig455_049429 {REF} {Length: 4263} {TRANSSPLICED} {Pfam: Amino-transferase class IV [PF01063.21, score=93.2]} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [Score=360, Expect=2e-121]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [Score=357, Expect=4e-120]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [Score=374, Expect=4e-127]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [Score=366, Expect=5e-124]} {Dmel: FBgn0030482, CG1673, [Score=365, Expect=3e-123]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [RH, Score=367, Expect=4e-124]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [RH, Score=407, Expect=2e-140]} {RNA1509_24419} {RNA1310_21362.1, RNA1509_24419} {RNA1509_24419, RNA815_10816}
5.	MligTC455_23622	626	13.03	Mlig455_069362	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.469 Region-enriched R4: 1.674/0.00636	RPS6KB1	0.952	-	-	0.952	-	-	-	Mlig455_069362 {REF} {Length: 5681} {Pfam: Protein kinase domain [PF00069.27, score=223.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.0]; Protein kinase C terminal domain [PF00433.26, score=40.0]; Kinase-like [PF14531.8, score=20.6]; Fungal protein kinase [PF17667.3, score=19.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.3]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=474, Expect=2e-164]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [RH, Score=471, Expect=1e-162]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=474, Expect=2e-163]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=5e-159]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=5e-159]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=454, Expect=6e-156]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=446, Expect=3e-152]} {Smed: dd_Smed_v6_11674_0_1, dd_Smed_v6_11674_0_1, [RH, Score=424, Expect=5e-144]} {RNA1509_13825} {RNA1310_8029, RNA1509_13825} {RNA1509_13825, RNA815_1183}

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