Data search
Results for MligTC455_34047
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34047 | 865 | 18.03 | Mlig455_042090 | Neo: - Age: - |
MARK2 | Mlig455_042090 {REF} {Length: 5885} {Pfam: Protein kinase domain [PF00069.27, score=255.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.8]; Kinase associated domain 1 [PF02149.21, score=63.7]; Kinase-like [PF14531.8, score=35.4]; ABC1 atypical kinase-like domain [PF03109.18, score=27.4]; RIO1 family [PF01163.24, score=18.8]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=678, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=682, Expect=0.0]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=676, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=660, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=529, Expect=2e-172]} {Smed: dd_Smed_v6_3685_0_2, dd_Smed_v6_3685_0_2, [Score=544, Expect=0.0]} {RNA1509_19724} {RNA1310_14498, RNA1509_19724} {RNA1509_19724, RNA815_16586} |
Cumulative graph for MligTC455_34047
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.061 | 4.416 | 0.28976 | 0.94162 | |
| RegionR2 | 0.38 | 4.416 | 0.32963 | 0.72184 | |
| RegionR3 | -0.188 | 4.416 | 0.57872 | 1.00000 | |
| RegionR4 | -0.306 | 4.416 | 0.44961 | 0.77853 | |
| RegionR5 | -0.031 | 4.416 | 0.92306 | 1.00000 | |
| RegionR6 | 0.096 | 4.416 | 0.77013 | 1.00000 | |
| RegionR7 | 0.655 | 4.416 | 0.08703 | 0.56729 | |
| RegionR8 | 0.455 | 4.416 | 0.33584 | 0.96849 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.699 | 4.416 | 0.60187 | 1.00000 | |
| RegenerationR2 | 0.102 | 4.416 | 0.74919 | 0.97300 | |
| RegenerationR3 | -0.531 | 4.416 | 0.16312 | 0.59771 | |
| RegenerationR4 | -0.031 | 4.416 | 0.93801 | 1.00000 | |
| RegenerationR5 | -0.368 | 4.416 | 0.29396 | 0.72188 | |
| RegenerationR6 | -0.449 | 4.416 | 0.24180 | 0.58981 | |
| RegenerationBL | -0.49 | 4.416 | 0.25008 | 0.60636 | |
| RegenerationTP | -0.964 | 4.416 | 0.04103 | 0.33660 |
Genes with expression patterns similar to MligTC455_34047
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34047 | 865 | 18.03 | Mlig455_042090 | Neo: - Age: - |
MARK2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042090 {REF} {Length: 5885} {Pfam: Protein kinase domain [PF00069.27, score=255.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.8]; Kinase associated domain 1 [PF02149.21, score=63.7]; Kinase-like [PF14531.8, score=35.4]; ABC1 atypical kinase-like domain [PF03109.18, score=27.4]; RIO1 family [PF01163.24, score=18.8]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=678, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=682, Expect=0.0]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=676, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=660, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=529, Expect=2e-172]} {Smed: dd_Smed_v6_3685_0_2, dd_Smed_v6_3685_0_2, [Score=544, Expect=0.0]} {RNA1509_19724} {RNA1310_14498, RNA1509_19724} {RNA1509_19724, RNA815_16586} |
| 2. | MligTC455_49614 | 692 | 14.42 | Mlig455_008153 | Neo: - Age: logFC(26M/2M)=-0.516 |
2.68 | - | - | 0.950 | 0.909 | 0.821 | - | Mlig455_008153 {REF} {Length: 2957} {Dmel: FBgn0053519, Unc-89, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_12629_0_1, dd_Smed_v6_12629_0_1, [RH, Score=220, Expect=1e-62]} {RNA1509_10730, RNA1509_23712} {RNA1310_6069.1, RNA1509_10730, RNA1509_23712} {RNA1509_10730, RNA1509_23712, RNA815_6292.1} | |
| 3. | MligTC455_04009 | 478 | 9.96 | Mlig455_001797 | Neo: - Age: - |
DGKQ | 1.718 | - | - | - | 0.754 | - | 0.964 | Mlig455_001797 {REF} {Length: 5042} {TRANSSPLICED} {Pfam: Diacylglycerol kinase accessory domain [PF00609.21, score=185.2]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=99.3]; Diacylglycerol kinase catalytic domain [PF00781.26, score=79.4]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=38.7]} {Human: ENSG00000145214, DGKQ, diacylglycerol kinase theta, [RH, Score=650, Expect=0.0]} {Mouse: ENSMUSG00000004815, Dgkq, diacylglycerol kinase, theta, [RH, Score=667, Expect=0.0]} {Dmel: FBgn0051140, CG31140, [Score=978, Expect=0.0]} {Celegans: WBGene00000958, dgk-1, Diacylglycerol kinase, [Score=809, Expect=0.0]} {Smed: dd_Smed_v6_7792_0_5, dd_Smed_v6_7792_0_5, [RH, Score=1024, Expect=0.0]} {RNA1509_8388} {RNA1310_12564} {RNA815_1076.1} |
| 4. | MligTC455_26735 | 132 | 2.75 | Mlig455_062257 | Neo: - Age: Down-Up-Up |
PGR | 1.678 | - | - | 0.724 | - | - | 0.954 | Mlig455_062257 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=68.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=63.4]} {Human: ENSG00000082175, PGR, progesterone receptor, [Score=107, Expect=4e-24]; ENSG00000113580, NR3C1, nuclear receptor subfamily 3 group C member 1, [Score=107, Expect=2e-24]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=102, Expect=3e-23]} {Mouse: ENSMUSG00000031870, Pgr, progesterone receptor, [Score=111, Expect=7e-26]; ENSMUSG00000024431, Nr3c1, nuclear receptor subfamily 3, group C, member 1, [Score=110, Expect=2e-25]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=102, Expect=2e-23]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=82.4, Expect=8e-17]} {Smed: dd_Smed_v6_10427_0_1, dd_Smed_v6_10427_0_1, [Score=85.5, Expect=9e-18]} {RNA1509_24832} {RNA1310_23073.1} {RNA815_12901} |
| 5. | MligTC455_33307 | 591 | 12.31 | Mlig455_003233 | Neo: - Age: Up-Down-Down |
RNF213 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_003233 {REF} {Length: 17150} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=28.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.1]; AAA ATPase domain [PF13191.8, score=19.8]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [RH, Score=1215, Expect=0.0]} {Smed: dd_Smed_v6_2250_0_1, dd_Smed_v6_2250_0_1, [RH, Score=53.9, Expect=2e-06]} {RNA1509_1434, RNA1509_20822, RNA1509_6512} {RNA1310_17.1, RNA1509_20822, RNA1509_6512} {RNA1509_20822, RNA1509_6512, RNA815_9.1} |
Berezikov Lab - 2020-2021 © ERIBA