Data search
Results for MligTC455_26735
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26735 | 132 | 2.75 | Mlig455_062257 | Neo: - Age: Down-Up-Up |
PGR | Mlig455_062257 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=68.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=63.4]} {Human: ENSG00000082175, PGR, progesterone receptor, [Score=107, Expect=4e-24]; ENSG00000113580, NR3C1, nuclear receptor subfamily 3 group C member 1, [Score=107, Expect=2e-24]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=102, Expect=3e-23]} {Mouse: ENSMUSG00000031870, Pgr, progesterone receptor, [Score=111, Expect=7e-26]; ENSMUSG00000024431, Nr3c1, nuclear receptor subfamily 3, group C, member 1, [Score=110, Expect=2e-25]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=102, Expect=2e-23]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=82.4, Expect=8e-17]} {Smed: dd_Smed_v6_10427_0_1, dd_Smed_v6_10427_0_1, [Score=85.5, Expect=9e-18]} {RNA1509_24832} {RNA1310_23073.1} {RNA815_12901} |
Cumulative graph for MligTC455_26735
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.415 | 2.271 | 0.67107 | 1.00000 | |
| RegionR2 | 0.17 | 2.271 | 0.81884 | 1.00000 | |
| RegionR3 | 0.127 | 2.271 | 0.81793 | 1.00000 | |
| RegionR4 | 2.196 | 2.271 | 0.08130 | 0.26773 | |
| RegionR5 | 0.914 | 2.271 | 0.36307 | 0.71543 | |
| RegionR6 | -0.42 | 2.271 | 0.95041 | 1.00000 | |
| RegionR7 | 0.159 | 2.271 | 0.82694 | 1.00000 | |
| RegionR8 | -0.73 | 2.271 | 0.97793 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.956 | 2.271 | 0.99990 | 1.00000 | |
| RegenerationR2 | 0.465 | 2.271 | 0.52226 | 0.87995 | |
| RegenerationR3 | 0.103 | 2.271 | 0.93037 | 1.00000 | |
| RegenerationR4 | -0.703 | 2.271 | 0.44577 | 0.83986 | |
| RegenerationR5 | 0.097 | 2.271 | 0.91841 | 1.00000 | |
| RegenerationR6 | 0.801 | 2.271 | 0.40547 | 0.74133 | |
| RegenerationBL | 1.856 | 2.271 | 0.07971 | 0.32967 | |
| RegenerationTP | -0.068 | 2.271 | 0.94734 | 1.00000 |
Genes with expression patterns similar to MligTC455_26735
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26735 | 132 | 2.75 | Mlig455_062257 | Neo: - Age: Down-Up-Up |
PGR | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062257 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=68.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=63.4]} {Human: ENSG00000082175, PGR, progesterone receptor, [Score=107, Expect=4e-24]; ENSG00000113580, NR3C1, nuclear receptor subfamily 3 group C member 1, [Score=107, Expect=2e-24]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=102, Expect=3e-23]} {Mouse: ENSMUSG00000031870, Pgr, progesterone receptor, [Score=111, Expect=7e-26]; ENSMUSG00000024431, Nr3c1, nuclear receptor subfamily 3, group C, member 1, [Score=110, Expect=2e-25]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=102, Expect=2e-23]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=82.4, Expect=8e-17]} {Smed: dd_Smed_v6_10427_0_1, dd_Smed_v6_10427_0_1, [Score=85.5, Expect=9e-18]} {RNA1509_24832} {RNA1310_23073.1} {RNA815_12901} |
| 2. | MligTC455_34047 | 865 | 18.03 | Mlig455_042090 | Neo: - Age: - |
MARK2 | 1.678 | - | - | 0.724 | - | - | 0.954 | Mlig455_042090 {REF} {Length: 5885} {Pfam: Protein kinase domain [PF00069.27, score=255.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.8]; Kinase associated domain 1 [PF02149.21, score=63.7]; Kinase-like [PF14531.8, score=35.4]; ABC1 atypical kinase-like domain [PF03109.18, score=27.4]; RIO1 family [PF01163.24, score=18.8]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=678, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=682, Expect=0.0]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=676, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=660, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=529, Expect=2e-172]} {Smed: dd_Smed_v6_3685_0_2, dd_Smed_v6_3685_0_2, [Score=544, Expect=0.0]} {RNA1509_19724} {RNA1310_14498, RNA1509_19724} {RNA1509_19724, RNA815_16586} |
| 3. | MligTC455_29716 | 338 | 7.04 | Mlig455_016983 | Neo: - Age: - |
HELZ2 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_016983 {REF} {Length: 7280} {Pfam: RNB domain [PF00773.21, score=198.0]; AAA domain [PF13086.8, score=134.8]; AAA domain [PF13087.8, score=125.5]; AAA domain [PF13604.8, score=33.3]; AAA domain [PF13245.8, score=24.0]; Dis3-like cold-shock domain 2 (CSD2) [PF17849.3, score=21.4]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=218, Expect=6e-56]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [RH, Score=307, Expect=2e-83]} {Dmel: FBgn0039183, Dis3, [Score=125, Expect=3e-28]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=102, Expect=2e-21]} {Smed: dd_Smed_v6_7048_0_2, dd_Smed_v6_7048_0_2, [Score=284, Expect=5e-77]} {RNA1509_5117} {RNA1310_536} {RNA815_182.1} |
| 4. | MligTC455_24630 | 962 | 20.04 | Mlig455_067759 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_067759 {REF} {Length: 5477} {Pfam: RhoGEF domain [PF00621.22, score=30.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=21.0]} {RNA1509_7176} {RNA1310_1343.1} {RNA815_2798} | |
| 5. | MligTC455_29640 | 596 | 12.43 | Mlig455_050194, Mlig455_066982 | Neo: - Age: logFC(26M/2M)=0.658 |
RBCK1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_050194 {REF} {Length: 2986} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=45.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.5]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=54.7, Expect=6e-07]} {Celegans: WBGene00013538, tag-349, [Score=91.3, Expect=6e-19]} {Smed: dd_Smed_v6_3281_0_1, dd_Smed_v6_3281_0_1, [Score=97.8, Expect=1e-20]} {RNA1509_36456} {RNA1310_5418} {RNA815_1642} Mlig455_066982 {REF} {Length: 3000} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=44.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=18.7]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=52.8, Expect=2e-06]} {Celegans: WBGene00013538, tag-349, [Score=90.5, Expect=1e-18]} {Smed: dd_Smed_v6_3281_0_1, dd_Smed_v6_3281_0_1, [Score=99.4, Expect=4e-21]} {RNA1509_36456} {RNA1310_5418} {RNA815_1642} |
| 6. | MligTC455_35174 | 342 | 7.13 | Mlig455_009545, Mlig455_054086 | Neo: - Age: Up-Down-Down |
PTPRN2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_009545 {REF} {Length: 87} {NoTransDecoderORF} {RNA1509_3577} {RNA1310_173.2} {RNA815_26664} Mlig455_054086 {REF} {Length: 10208} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=222.7]} {Human: ENSG00000155093, PTPRN2, protein tyrosine phosphatase, receptor type N2, [RH, Score=412, Expect=1e-129]} {Mouse: ENSMUSG00000056553, Ptprn2, protein tyrosine phosphatase, receptor type, N polypeptide 2, [RH, Score=407, Expect=7e-128]} {Dmel: FBgn0031294, IA-2, IA-2 protein tyrosine phosphatase, [RH, Score=376, Expect=8e-114]} {Celegans: WBGene00002048, ida-1, IA2; IDA-1 protein; Related to Islet cell Diabetes Autoantigen, [Score=280, Expect=1e-82]} {Smed: dd_Smed_v6_6990_0_1, dd_Smed_v6_6990_0_1, [RH, Score=391, Expect=8e-125]} {RNA1509_34721, RNA1509_41198} {RNA1310_3634, RNA1509_34721, RNA1509_41198} {RNA1509_34721, RNA1509_41198, RNA815_1727.1} |
| 7. | MligTC455_15755 | 62 | 1.3 | Mlig455_051284 | Neo: - Age: - Region-enriched R7: 4.959/0.00065 |
CHRNB3 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_051284 {REF} {Length: 2666} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=130.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=32.4]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=142, Expect=1e-37]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=139, Expect=2e-36]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=137, Expect=1e-35]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=160, Expect=5e-44]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=146, Expect=9e-39]} {Celegans: WBGene00020048, lgc-12, Ligand-Gated ion Channel, [Score=140, Expect=2e-37]} {Smed: dd_Smed_v6_29533_0_1, dd_Smed_v6_29533_0_1, [RH, Score=205, Expect=1e-61]} {RNA1310_22037} {RNA815_37244} |
| 8. | MligTC455_16443 | 560 | 11.67 | Mlig455_047216 | Neo: - Age: Up-Down-Up Region-enriched R8: 2.396/0.00243 |
DLL1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_047216 {REF} {Length: 4101} {Pfam: EGF-like domain [PF00008.29, score=59.8]; Delta serrate ligand [PF01414.21, score=56.2]; EGF-like domain [PF07974.15, score=38.9]; N terminus of Notch ligand [PF07657.15, score=34.4]; Human growth factor-like EGF [PF12661.9, score=25.6]} {Human: ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [RH, Score=285, Expect=2e-84]; ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [RH, Score=285, Expect=2e-84]} {Mouse: ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [RH, Score=288, Expect=4e-86]} {Dmel: FBgn0000463, Dl, dorsal, [Score=278, Expect=2e-81]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=140, Expect=6e-34]} {Smed: dd_Smed_v6_13823_0_1, dd_Smed_v6_13823_0_1, [Score=261, Expect=2e-74]} {RNA1509_36534} {RNA1310_18410} {RNA815_20311} |
| 9. | MligTC455_19617 | 65 | 1.35 | Mlig455_025425 | Neo: - Age: - |
CALML3 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_025425 {REF} {Length: 1452} {Pfam: EF-hand domain pair [PF13499.8, score=61.7]; EF hand [PF00036.34, score=61.0]; EF hand [PF13202.8, score=52.7]; EF-hand domain pair [PF13833.8, score=49.9]; EF-hand domain [PF13405.8, score=48.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=21.6]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=71.2, Expect=5e-16]; ENSG00000198668, CALM1, calmodulin 1, [Score=69.7, Expect=6e-16]; ENSG00000160014, CALM3, calmodulin 3, [Score=69.7, Expect=6e-16]; ENSG00000143933, CALM2, calmodulin 2, [Score=69.7, Expect=2e-15]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=69.7, Expect=1e-15]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=69.7, Expect=4e-16]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=69.7, Expect=1e-15]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=67.4, Expect=9e-15]} {Dmel: FBgn0011273, Acam, Androcam, [Score=71.2, Expect=2e-16]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=68.6, Expect=9e-16]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=68.6, Expect=1e-15]} {RNA1509_20139} {RNA1310_66696} {RNA815_4015} |
| 10. | MligTC455_33307 | 591 | 12.31 | Mlig455_003233 | Neo: - Age: Up-Down-Down |
RNF213 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_003233 {REF} {Length: 17150} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=28.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.1]; AAA ATPase domain [PF13191.8, score=19.8]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [RH, Score=1215, Expect=0.0]} {Smed: dd_Smed_v6_2250_0_1, dd_Smed_v6_2250_0_1, [RH, Score=53.9, Expect=2e-06]} {RNA1509_1434, RNA1509_20822, RNA1509_6512} {RNA1310_17.1, RNA1509_20822, RNA1509_6512} {RNA1509_20822, RNA1509_6512, RNA815_9.1} |
| 11. | MligTC455_19305 | 504 | 10.51 | Mlig455_018442 | Neo: - Age: - |
UBE2E2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_018442 {REF} {Length: 3163} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=156.6]} {Human: ENSG00000182247, UBE2E2, ubiquitin conjugating enzyme E2 E2, [RH, Score=283, Expect=4e-98]; ENSG00000170035, UBE2E3, ubiquitin conjugating enzyme E2 E3, [RH, Score=283, Expect=8e-98]; ENSG00000170142, UBE2E1, ubiquitin conjugating enzyme E2 E1, [RH, Score=279, Expect=1e-96]} {Mouse: ENSMUSG00000027011, Ube2e3, ubiquitin-conjugating enzyme E2E 3, [RH, Score=283, Expect=5e-98]; ENSMUSG00000058317, Ube2e2, ubiquitin-conjugating enzyme E2E 2, [RH, Score=282, Expect=1e-97]; ENSMUSG00000021774, Ube2e1, ubiquitin-conjugating enzyme E2E 1, [RH, Score=280, Expect=8e-97]} {Dmel: FBgn0015320, Ubc2, Ubiquitin conjugating enzyme 2, [RH, Score=295, Expect=2e-102]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=201, Expect=6e-67]} {Smed: dd_Smed_v6_7817_0_1, dd_Smed_v6_7817_0_1, [RH, Score=236, Expect=2e-79]} {RNA1509_43521, RNA1509_54207, RNA1509_54219} {RNA1310_27277.2, RNA1509_43521, RNA1509_54207, RNA1509_54219} {RNA1509_43521, RNA1509_54207, RNA1509_54219, RNA815_19787} |
Berezikov Lab - 2020-2021 © ERIBA