Data search
Results for MligTC455_34063
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34063 | 82 | 1.71 | Mlig455_051552 | Neo: - |
Mlig455_051552 {REF} {Length: 4615} {RNA1509_19235} {RNA1310_21331} {RNA815_28500} |
Cumulative graph for MligTC455_34063
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.513 | 1.68 | 0.99978 | 1.00000 | |
| RegionR2 | 1.72 | 1.68 | 0.27718 | 0.66299 | |
| RegionR3 | 0.665 | 1.68 | 0.55465 | 1.00000 | |
| RegionR4 | 1.013 | 1.68 | 0.34831 | 0.66953 | |
| RegionR5 | 1.344 | 1.68 | 0.27170 | 0.59684 | |
| RegionR6 | -2.271 | 1.68 | 0.99991 | 1.00000 | |
| RegionR7 | 1.866 | 1.68 | 0.25988 | 0.88674 | |
| RegionR8 | -1.823 | 1.68 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.997 | 1.68 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.057 | 1.68 | 0.31173 | 0.75181 | |
| RegenerationR3 | 1.588 | 1.68 | 0.25769 | 0.69229 | |
| RegenerationR4 | 1.289 | 1.68 | 0.30265 | 0.74429 | |
| RegenerationR5 | 1.575 | 1.68 | 0.17501 | 0.60423 | |
| RegenerationR6 | 3.423 | 1.68 | 0.07322 | 0.33802 | |
| RegenerationBL | 2.205 | 1.68 | 0.21261 | 0.55671 | |
| RegenerationTP | 3.467 | 1.68 | 0.11355 | 0.51697 |
Genes with expression patterns similar to MligTC455_34063
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34063 | 82 | 1.71 | Mlig455_051552 | Neo: - |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051552 {REF} {Length: 4615} {RNA1509_19235} {RNA1310_21331} {RNA815_28500} | |
| 2. | MligTC455_14757 | 726 | 15.12 | Mlig455_043399, Mlig455_043416, Mlig455_043559, Mlig455_043567 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.347 Region-specific R8: 6.849 Region-enriched R8: 6.705/0.00000 Regeneration-downregulated BL: -8.524 Regeneration-depleted BL: -8.524 |
1.828 | - | - | - | 0.848 | 0.980 | - | Mlig455_043399 {REF} {Length: 5997} {Dmel: FBgn0010434, cora, coracle, [Score=80.5, Expect=1e-14]} {RNA1509_17394} {RNA1310_20597} {RNA815_24724} Mlig455_043416 {REF} {Length: 6138} {RNA1509_17394} {RNA1310_20597} {RNA815_24724} Mlig455_043559 {REF} {Length: 7159} {RNA1509_17394} {RNA1310_38694} {RNA815_21047} Mlig455_043567 {REF} {Length: 8454} {Dmel: FBgn0010434, cora, coracle, [Score=51.6, Expect=3e-06]} {RNA1509_17394} {RNA1310_20597} {RNA815_24724} |
|
| 3. | MligTC455_40284 | 142 | 2.97 | Mlig455_045795 | Neo: - Age: - |
1.797 | - | - | - | - | 0.955 | 0.842 | Mlig455_045795 {REF} {Length: 965} {NoTransDecoderORF} {RNA1509_26792} {RNA1310_13078} | |
| 4. | MligTC455_02982 | 496 | 10.34 | Mlig455_021516 | Neo: Int S/G2/M Age: Down-Up-Up |
MRPL55 | 1.655 | - | - | 0.704 | - | 0.951 | - | Mlig455_021516 {REF} {Length: 892} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L55 [PF09776.11, score=84.4]} {Human: ENSG00000162910, MRPL55, mitochondrial ribosomal protein L55, [RH, Score=63.2, Expect=3e-13]} {Mouse: ENSMUSG00000036860, Mrpl55, mitochondrial ribosomal protein L55, [RH, Score=62.8, Expect=2e-13]} {Dmel: FBgn0038678, mRpL55, mitochondrial ribosomal protein L55, [RH, Score=68.2, Expect=8e-16]} {Celegans: WBGene00022045, mrpl-55, Mitochondrial Ribosomal Protein, Large, [RH, Score=69.7, Expect=3e-16]} {Smed: dd_Smed_v6_4982_0_1, dd_Smed_v6_4982_0_1, [RH, Score=54.7, Expect=1e-10]} {RNA1509_8283} {RNA1310_15061} {RNA815_18521} |
| 5. | MligTC455_18715 | 178 | 3.71 | Mlig455_053389 | Neo: - Age: logFC(26M/2M)=0.210 |
NLE1 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_053389 {REF} {Length: 3868} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=172.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=66.4]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=30.9]; Variant SH3 domain [PF14604.8, score=30.2]; SH3 domain [PF00018.30, score=29.7]; WD40-like Beta Propeller Repeat [PF07676.14, score=24.9]} {Human: ENSG00000073536, NLE1, notchless homolog 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000020692, Nle1, notchless homolog 1, [RH, Score=552, Expect=0.0]} {Dmel: FBgn0021874, Nle, Notchless, [RH, Score=487, Expect=6e-164]} {Celegans: WBGene00021074, W07E6.2, [RH, Score=506, Expect=1e-171]} {Smed: dd_Smed_v6_10113_0_1, dd_Smed_v6_10113_0_1, [RH, Score=415, Expect=2e-135]} {RNA1509_10089, RNA1509_59623} {RNA1310_18226.1, RNA1509_59623} {RNA1509_59623, RNA815_6966} |
| 6. | MligTC455_21935 | 341 | 7.11 | Mlig455_028387 | Neo: Irradiation Age: - |
NRDC | 0.972 | - | - | - | - | 0.972 | - | Mlig455_028387 {REF} {Length: 4440} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=166.5]; Insulinase (Peptidase family M16) [PF00675.22, score=105.9]; Peptidase M16 inactive domain [PF05193.23, score=72.0]} {Human: ENSG00000078618, NRDC, nardilysin convertase, [RH, Score=462, Expect=5e-143]} {Mouse: ENSMUSG00000053510, Nrd1, nardilysin, N-arginine dibasic convertase, NRD convertase 1, [RH, Score=455, Expect=7e-140]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [RH, Score=368, Expect=1e-108]} {Celegans: WBGene00013492, Y70C5C.1, [Score=275, Expect=4e-77]} {Smed: dd_Smed_v6_5554_0_1, dd_Smed_v6_5554_0_1, [RH, Score=463, Expect=2e-145]} {RNA1509_34503, RNA1509_4265, RNA1509_59952} {RNA1310_2465.1, RNA1509_34503, RNA1509_59952} {RNA1509_34503, RNA1509_59952, RNA815_925.1} |
| 7. | MligTC455_46129 | 328 | 6.83 | Mlig455_058113 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_058113 {REF} {Length: 2107} {TRANSSPLICED} {RNA1509_34188} {RNA1310_30874} {RNA815_17123} | |
| 8. | MligTC455_39623 | 225 | 4.68 | Mlig455_061229 | Neo: - Age: logFC(26M/2M)=0.622 |
NRDE2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_061229 {REF} {Length: 4599} {TRANSSPLICED} {Pfam: NRDE-2, necessary for RNA interference [PF08424.12, score=144.4]} {Human: ENSG00000119720, NRDE2, NRDE-2, necessary for RNA interference, domain containing, [RH, Score=134, Expect=9e-32]} {Mouse: ENSMUSG00000021179, Nrde2, nrde-2 necessary for RNA interference, domain containing, [RH, Score=124, Expect=5e-29]} {Smed: dd_Smed_v6_12142_0_1, dd_Smed_v6_12142_0_1, [RH, Score=102, Expect=3e-22]} {RNA1509_37760} {RNA1310_3668.2} {RNA815_2487.1} |
| 9. | MligTC455_25455 | 78 | 1.63 | Mlig455_010588 | Neo: - Age: - |
PCDH11Y | 0.96 | - | - | - | 0.960 | - | - | Mlig455_010588 {REF} {Length: 5437} {Pfam: Cadherin domain [PF00028.19, score=239.9]; Cadherin-like [PF08266.14, score=39.1]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=221, Expect=8e-58]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=219, Expect=3e-57]; ENSG00000156453, PCDH1, protocadherin 1, [Score=217, Expect=4e-57]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=218, Expect=1e-57]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=209, Expect=3e-54]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=208, Expect=1e-53]} {Dmel: FBgn0284247, ds, dachsous, [Score=202, Expect=4e-52]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=163, Expect=3e-40]} {Smed: dd_Smed_v6_7973_0_1, dd_Smed_v6_7973_0_1, [Score=283, Expect=4e-79]} {RNA1509_52197} {RNA1310_19708.1} {RNA815_21665.1} |
| 10. | MligTC455_47400 | 16 | 0.32 | Mlig455_010178 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_010178 {REF} {Length: 955} {NoTransDecoderORF} {RNA1310_92616} | |
| 11. | MligTC455_10884 | 24 | 0.51 | Mlig455_059238 | Neo: - Age: - |
ADPRHL1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_059238 {REF} {Length: 5402} {TRANSSPLICED} {Human: ENSG00000153531, ADPRHL1, ADP-ribosylhydrolase like 1, [Score=58.5, Expect=6e-08]} {Mouse: ENSMUSG00000022957, Itsn1, intersectin 1 (SH3 domain protein 1A), [Score=52.4, Expect=3e-06]} {Dmel: FBgn0033636, tou, toutatis, [Score=65.9, Expect=2e-10]} {Celegans: WBGene00021498, Y40C7B.1, [Score=51.6, Expect=3e-06]} {Smed: dd_Smed_v6_6533_0_1, dd_Smed_v6_6533_0_1, [RH, Score=111, Expect=6e-25]} {RNA1509_6076} {RNA1310_3369.1} {RNA815_5035} |
| 12. | MligTC455_39624 | 219 | 4.56 | Mlig455_061231 | Neo: - Age: - |
FAM91A1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_061231 {REF} {Length: 4156} {TRANSSPLICED} {Pfam: FAM91 C-terminus [PF14648.8, score=404.4]; FAM91 N-terminus [PF14647.8, score=395.5]} {Human: ENSG00000176853, FAM91A1, family with sequence similarity 91 member A1, [RH, Score=669, Expect=0.0]} {Mouse: ENSMUSG00000116351, Fam91a1, family with sequence similarity 91, member A1, [RH, Score=675, Expect=0.0]; ENSMUSG00000037119, Fam91a1, family with sequence similarity 91, member A1, [RH, Score=675, Expect=0.0]} {Dmel: FBgn0064766, CG7600, [RH, Score=434, Expect=1e-138]} {Celegans: WBGene00009366, F33H2.2, [RH, Score=480, Expect=1e-157]} {Smed: dd_Smed_v6_2471_0_1, dd_Smed_v6_2471_0_1, [Score=310, Expect=1e-92]} {RNA1509_14243, RNA1509_26276} {RNA1310_3146, RNA1509_14243, RNA1509_26276} {RNA1509_14243, RNA1509_26276, RNA815_1984} |
| 13. | MligTC455_16703 | 414 | 8.62 | Mlig455_043256, Mlig455_043281 | Neo: - Age: logFC(26M/2M)=0.464 Region-enriched R5: 2.416/0.00237 |
GOSR2 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_043256 {REF} {Length: 998} {TRANSSPLICED} {Pfam: Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=54.6]; Sec20 [PF03908.15, score=21.1]} {Human: ENSG00000108433, GOSR2, golgi SNAP receptor complex member 2, [RH, Score=165, Expect=4e-51]} {Mouse: ENSMUSG00000020946, Gosr2, golgi SNAP receptor complex member 2, [RH, Score=176, Expect=2e-55]} {Dmel: FBgn0260856, Membrin, [RH, Score=137, Expect=2e-40]} {Celegans: WBGene00007128, memb-1, Golgi SNAP receptor complex member 2 homolog memb-1, [RH, Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_7430_0_1, dd_Smed_v6_7430_0_1, [RH, Score=159, Expect=6e-49]} {RNA1509_13895} {RNA1310_2428.2} {RNA815_15259.1} Mlig455_043281 {REF} {Length: 2773} {TRANSSPLICED} {Pfam: Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=54.6]; Sec20 [PF03908.15, score=21.0]} {Human: ENSG00000108433, GOSR2, golgi SNAP receptor complex member 2, [RH, Score=165, Expect=4e-51]} {Mouse: ENSMUSG00000020946, Gosr2, golgi SNAP receptor complex member 2, [RH, Score=176, Expect=1e-55]} {Dmel: FBgn0260856, Membrin, [RH, Score=137, Expect=3e-40]} {Celegans: WBGene00007128, memb-1, Golgi SNAP receptor complex member 2 homolog memb-1, [RH, Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_7430_0_1, dd_Smed_v6_7430_0_1, [RH, Score=159, Expect=6e-49]} {RNA1509_13895} {RNA1310_2428.1} {RNA815_15259.1} |
| 14. | MligTC455_32527 | 225 | 4.7 | Mlig455_003953 | Neo: - Age: - Region-enriched R4: 1.844/0.00300 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_003953 {REF} {Length: 1575} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1} | |
| 15. | MligTC455_02981 | 502 | 10.46 | Mlig455_021254 | Neo: - Age: - Region-enriched R5: 1.023/0.01867 |
MRPL55 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_021254 {REF} {Length: 901} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L55 [PF09776.11, score=84.4]} {Human: ENSG00000162910, MRPL55, mitochondrial ribosomal protein L55, [RH, Score=63.5, Expect=2e-13]} {Mouse: ENSMUSG00000036860, Mrpl55, mitochondrial ribosomal protein L55, [RH, Score=63.2, Expect=2e-13]} {Dmel: FBgn0038678, mRpL55, mitochondrial ribosomal protein L55, [RH, Score=68.6, Expect=7e-16]} {Celegans: WBGene00022045, mrpl-55, Mitochondrial Ribosomal Protein, Large, [RH, Score=69.7, Expect=3e-16]} {Smed: dd_Smed_v6_4982_0_1, dd_Smed_v6_4982_0_1, [RH, Score=55.1, Expect=9e-11]} {RNA1509_8283} {RNA1310_15061, RNA1509_8283} {RNA1509_8283, RNA815_18521} |
| 16. | MligTC455_40134 | 396 | 8.25 | Mlig455_003061, Mlig455_003267 | Neo: Int S/G2/M Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_003061 {REF} {Length: 2554} {Pfam: WD domain, G-beta repeat [PF00400.34, score=27.5]} {RNA1509_32538, RNA1509_54728} {RNA1310_22220, RNA1509_32538, RNA1509_54728} {RNA1509_32538, RNA1509_54728, RNA815_9624} Mlig455_003267 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.3]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=48.9, Expect=4e-06]} {RNA1509_32538} {RNA1310_22220} {RNA815_9624} |
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