TomoSeq data search

Data search

Results for MligTC455_47400

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47400

16

0.32

Mlig455_010178

Neo: -

Age: -

Mlig455_010178 {REF} {Length: 955} {NoTransDecoderORF} {RNA1310_92616}

Cumulative graph for MligTC455_47400

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.431	0.778	0.99994	1.00000
RegionR2	2.737	0.778	0.28264	0.66909
RegionR3	-0.497	0.778	1.00000	1.00000
RegionR4	1.036	0.778	0.43390	0.76278
RegionR5	2.212	0.778	0.18595	0.46640
RegionR6	-0.53	0.778	0.99996	1.00000
RegionR7	-1.043	0.778	0.99987	1.00000
RegionR8	-1.485	0.778	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.261	0.778	0.99990	1.00000
RegenerationR2	-0.98	0.778	0.66213	0.94241
RegenerationR3	2.737	0.778	0.30536	0.73639
RegenerationR4	1.655	0.778	0.72092	0.96167
RegenerationR5	-2.391	0.778	0.28670	0.71488
RegenerationR6	2.432	0.778	0.34080	0.68659
RegenerationBL	-0.297	0.778	0.99988	1.00000
RegenerationTP	3.309	0.778	0.37467	0.81143

Genes with expression patterns similar to MligTC455_47400

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47400	16	0.32	Mlig455_010178	Neo: - Age: -		2	-	-	-	1.000	1.000	-	Mlig455_010178 {REF} {Length: 955} {NoTransDecoderORF} {RNA1310_92616}
2.	MligTC455_35686	65	1.36	Mlig455_038919	Neo: - Age: -		0.992	-	-	-	-	0.992	-	Mlig455_038919 {REF} {Length: 2464} {RNA1509_23775} {RNA1310_8867} {RNA815_5748.1}
3.	MligTC455_24537	46	0.96	Mlig455_009280	Neo: - Age: logFC(26M/2M)=1.720 Region-enriched R4: 3.726/0.04899 Region-enriched R3: 3.461/0.04295	P4HB	0.982	-	-	-	-	0.982	-	Mlig455_009280 {REF} {Length: 2535} {Pfam: Thioredoxin [PF00085.22, score=151.6]; Thioredoxin-like domain [PF13848.8, score=137.0]; Thioredoxin-like [PF13905.8, score=36.7]; Calsequestrin [PF01216.19, score=30.9]; ERp29, N-terminal domain [PF07912.15, score=29.5]; Thioredoxin-like [PF13899.8, score=27.9]; Thioredoxin-like domain [PF13098.8, score=27.8]; OST3 / OST6 family, transporter family [PF04756.15, score=26.5]; AhpC/TSA family [PF00578.23, score=19.0]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=416, Expect=4e-140]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=416, Expect=5e-140]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=381, Expect=4e-127]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=402, Expect=3e-135]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=419, Expect=4e-142]} {RNA1509_26478} {RNA1310_9678, RNA1509_26478} {RNA1509_26478, RNA815_5042}
4.	MligTC455_25454	85	1.78	Mlig455_010571	Neo: - Age: Up-Down-Down	PCDH11Y	0.978	-	-	-	0.978	-	-	Mlig455_010571 {REF} {Length: 5203} {Pfam: Cadherin domain [PF00028.19, score=240.3]; Cadherin-like [PF08266.14, score=38.0]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=244, Expect=2e-65]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=244, Expect=2e-65]; ENSG00000156453, PCDH1, protocadherin 1, [Score=237, Expect=2e-63]; ENSG00000184226, PCDH9, protocadherin 9, [Score=232, Expect=5e-62]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=236, Expect=2e-63]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=231, Expect=9e-62]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=228, Expect=5e-60]; ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=226, Expect=6e-61]} {Dmel: FBgn0284247, ds, dachsous, [Score=219, Expect=3e-57]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=160, Expect=3e-39]} {Smed: dd_Smed_v6_13155_0_1, dd_Smed_v6_13155_0_1, [RH, Score=327, Expect=5e-95]} {RNA1509_52197} {RNA1310_19708.1} {RNA815_21665.1}
5.	MligTC455_10884	24	0.51	Mlig455_059238	Neo: - Age: -	ADPRHL1	0.974	-	-	-	0.974	-	-	Mlig455_059238 {REF} {Length: 5402} {TRANSSPLICED} {Human: ENSG00000153531, ADPRHL1, ADP-ribosylhydrolase like 1, [Score=58.5, Expect=6e-08]} {Mouse: ENSMUSG00000022957, Itsn1, intersectin 1 (SH3 domain protein 1A), [Score=52.4, Expect=3e-06]} {Dmel: FBgn0033636, tou, toutatis, [Score=65.9, Expect=2e-10]} {Celegans: WBGene00021498, Y40C7B.1, [Score=51.6, Expect=3e-06]} {Smed: dd_Smed_v6_6533_0_1, dd_Smed_v6_6533_0_1, [RH, Score=111, Expect=6e-25]} {RNA1509_6076} {RNA1310_3369.1} {RNA815_5035}
6.	MligTC455_41929	42	0.87	Mlig455_058092	Neo: - Age: Down-Up-Down		0.969	-	-	-	-	0.969	-	Mlig455_058092 {REF} {Length: 1217} {NoTransDecoderORF} {RNA1509_11856} {RNA1310_9867.2} {RNA815_18841.1}
7.	MligTC455_04358	40	0.83	Mlig455_061396	Neo: - Age: - Region-enriched R7: 4.622/0.01812		0.963	-	-	-	0.963	-	-	Mlig455_061396 {REF} {Length: 963} {RNA1509_36436} {RNA1310_57166} {RNA815_43432}
8.	MligTC455_17652	18	0.37	Mlig455_050566	Neo: - Age: - Region-enriched R8: 5.704/0.00683 Region-enriched R7: 4.641/0.00647 Region-enriched R2: 3.617/0.01372		0.963	-	-	-	-	0.963	-	Mlig455_050566 {REF} {Length: 646} {NoTransDecoderORF} {RNA1310_71944}
9.	MligTC455_34063	82	1.71	Mlig455_051552	Neo: - Age: Up-Down-Up, logFC(26M/2M)=2.075		0.96	-	-	-	0.960	-	-	Mlig455_051552 {REF} {Length: 4615} {RNA1509_19235} {RNA1310_21331} {RNA815_28500}
10.	MligTC455_46003	343	7.14	Mlig455_031613	Neo: - Age: -	HS3ST4	0.958	-	-	-	-	0.958	-	Mlig455_031613 {REF} {Length: 2875} {Pfam: Sulfotransferase domain [PF00685.29, score=127.2]; Sulfotransferase family [PF13469.8, score=64.3]} {Human: ENSG00000182601, HS3ST4, heparan sulfate-glucosamine 3-sulfotransferase 4, [RH, Score=290, Expect=7e-95]; ENSG00000276333, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [RH, Score=281, Expect=7e-93]; ENSG00000162040, HS3ST6, heparan sulfate-glucosamine 3-sulfotransferase 6, [RH, Score=281, Expect=7e-93]; ENSG00000153976, HS3ST3A1, heparan sulfate-glucosamine 3-sulfotransferase 3A1, [RH, Score=281, Expect=5e-92]; ENSG00000125430, HS3ST3B1, heparan sulfate-glucosamine 3-sulfotransferase 3B1, [RH, Score=280, Expect=9e-92]} {Mouse: ENSMUSG00000070407, Hs3st3b1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1, [RH, Score=290, Expect=1e-95]; ENSMUSG00000047759, Hs3st3a1, heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1, [RH, Score=289, Expect=3e-95]; ENSMUSG00000078591, Hs3st4, heparan sulfate (glucosamine) 3-O-sulfotransferase 4, [RH, Score=288, Expect=4e-94]; ENSMUSG00000039628, Hs3st6, heparan sulfate (glucosamine) 3-O-sulfotransferase 6, [RH, Score=284, Expect=4e-94]} {Dmel: FBgn0031005, Hs3st-B, Heparan sulfate 3-O sulfotransferase-B, [RH, Score=290, Expect=8e-96]} {Celegans: WBGene00044303, hst-3.2, Heparan SulphoTransferase, [RH, Score=238, Expect=8e-77]} {Smed: dd_Smed_v6_81402_0_1, dd_Smed_v6_81402_0_1, [Score=131, Expect=5e-37]} {RNA1509_17978} {RNA1310_10288, RNA1509_17978} {RNA1509_17978, RNA815_5964}
11.	MligTC455_50550	79	1.65	Mlig455_012759	Neo: - Age: -	MAP3K7	0.957	-	-	-	-	0.957	-	Mlig455_012759 {REF} {Length: 2310} {Pfam: Protein kinase domain [PF00069.27, score=97.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.3]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=79.7, Expect=3e-15]} {Mouse: ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=79.7, Expect=2e-15]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=72.0, Expect=7e-13]} {Celegans: WBGene00003396, mom-4, Mitogen-activated protein kinase kinase kinase mom-4, [Score=77.4, Expect=6e-15]} {Smed: dd_Smed_v6_6769_0_1, dd_Smed_v6_6769_0_1, [Score=77.8, Expect=5e-15]} {RNA1509_52288} {RNA1310_14858.1} {RNA815_34629}
12.	MligTC455_25455	78	1.63	Mlig455_010588	Neo: - Age: -	PCDH11Y	0.955	-	-	-	0.955	-	-	Mlig455_010588 {REF} {Length: 5437} {Pfam: Cadherin domain [PF00028.19, score=239.9]; Cadherin-like [PF08266.14, score=39.1]} {Human: ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=221, Expect=8e-58]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=219, Expect=3e-57]; ENSG00000156453, PCDH1, protocadherin 1, [Score=217, Expect=4e-57]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=218, Expect=1e-57]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=209, Expect=3e-54]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=208, Expect=1e-53]} {Dmel: FBgn0284247, ds, dachsous, [Score=202, Expect=4e-52]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=163, Expect=3e-40]} {Smed: dd_Smed_v6_7973_0_1, dd_Smed_v6_7973_0_1, [Score=283, Expect=4e-79]} {RNA1509_52197} {RNA1310_19708.1} {RNA815_21665.1}
13.	MligTC455_28469	22	0.45	Mlig455_014256	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_014256 {REF} {Length: 5298} {Dmel: FBgn0030052, CG12065, [Score=124, Expect=8e-29]} {Celegans: WBGene00019199, H14E04.2, [Score=102, Expect=2e-22]} {Smed: dd_Smed_v6_2100_0_2, dd_Smed_v6_2100_0_2, [Score=150, Expect=1e-37]} {RNA1509_30308} {RNA1310_3001, RNA1509_30308} {RNA1509_30308, RNA815_45999}
14.	MligTC455_34834	126	2.62	Mlig455_036550, Mlig455_057800, Mlig455_057817	Neo: Int S/G2/M Age: -		0.952	-	-	-	-	0.952	-	Mlig455_036550 {REF} {Length: 2962} {RNA1509_42812} {RNA1310_32131} {RNA815_46120} Mlig455_057800 {REF} {Length: 3033} {RNA1509_42812} {RNA1310_32131} {RNA815_46120} Mlig455_057817 {REF} {Length: 2955} {RNA1509_42812} {RNA1310_32131} {RNA815_46120}

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