Data search


search
Exact
Search

Results for MligTC455_34130

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34130 35 0.73 Mlig455_034673

Neo: -

Age: -

Mlig455_034673 {REF} {Length: 1038} {NoTransDecoderORF} {RNA1509_25730} {RNA1310_51993} {RNA815_11470.2}

Cumulative graph for MligTC455_34130

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.716 1.089 0.99978 1.00000
RegionR2 0.692 1.089 0.73794 1.00000
RegionR3 -0.734 1.089 0.93396 1.00000
RegionR4 0.929 1.089 0.63237 0.94056
RegionR5 -1.079 1.089 0.96162 1.00000
RegionR6 1.339 1.089 0.54887 1.00000
RegionR7 -2.154 1.089 1.00000 1.00000
RegionR8 1.723 1.089 0.59851 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.115 1.089 1.00000 1.00000
RegenerationR2 0.761 1.089 0.74879 0.97289
RegenerationR3 1.37 1.089 0.66076 0.93337
RegenerationR4 0.604 1.089 0.87440 1.00000
RegenerationR5 2.388 1.089 0.38031 0.78686
RegenerationR6 -1.763 1.089 0.47542 0.78842
RegenerationBL -2.53 1.089 0.99974 1.00000
RegenerationTP 2.33 1.089 0.49846 0.89949


Genes with expression patterns similar to MligTC455_34130

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34130 35 0.73 Mlig455_034673

Neo: -

Age: -

2 - - - - 1.000 1.000 Mlig455_034673 {REF} {Length: 1038} {NoTransDecoderORF} {RNA1509_25730} {RNA1310_51993} {RNA815_11470.2}
2. MligTC455_34129 35 0.73 Mlig455_034671

Neo: -

Age: -

1.999 - - - - 0.999 1.000 Mlig455_034671 {REF} {Length: 710} {NoTransDecoderORF} {RNA1509_25730} {RNA1310_51993} {RNA815_11470.1}
3. MligTC455_28472 95 1.99 Mlig455_027357

Neo: -

Age: -

JPH3 0.981 - - - - - 0.981 Mlig455_027357 {REF} {Length: 4050} {Pfam: MORN repeat [PF02493.22, score=88.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.0]} {Human: ENSG00000154118, JPH3, junctophilin 3, [RH, Score=391, Expect=2e-122]} {Mouse: ENSMUSG00000025318, Jph3, junctophilin 3, [RH, Score=391, Expect=1e-122]} {Dmel: FBgn0032129, jp, junctophilin, [RH, Score=386, Expect=1e-117]} {Celegans: WBGene00002179, jph-1, JunctoPHilin, [RH, Score=379, Expect=4e-118]} {Smed: dd_Smed_v6_4752_0_1, dd_Smed_v6_4752_0_1, [RH, Score=516, Expect=6e-169]} {RNA1509_50399} {RNA1310_28126} {RNA815_32733}
4. MligTC455_43006 267 5.55 Mlig455_000593, Mlig455_030391, Mlig455_069016

Neo: -

Age: logFC(26M/2M)=-0.411

CCDC177 0.975 - - - - - 0.975

Mlig455_000593 {REF} {Length: 2095} {Human: ENSG00000267909, CCDC177, coiled-coil domain containing 177, [Score=70.9, Expect=1e-12]} {Mouse: ENSMUSG00000062961, Ccdc177, coiled-coil domain containing 177, [Score=64.7, Expect=8e-11]} {Smed: dd_Smed_v6_9816_0_1, dd_Smed_v6_9816_0_1, [Score=56.2, Expect=1e-08]} {RNA1509_53422} {RNA1310_19778, RNA1509_53422} {RNA1509_53422, RNA815_39052}

Mlig455_030391 {REF} {Length: 2071} {Human: ENSG00000267909, CCDC177, coiled-coil domain containing 177, [Score=70.9, Expect=1e-12]} {Mouse: ENSMUSG00000062961, Ccdc177, coiled-coil domain containing 177, [Score=64.7, Expect=9e-11]} {Smed: dd_Smed_v6_9816_0_1, dd_Smed_v6_9816_0_1, [Score=56.2, Expect=1e-08]} {RNA1509_53422} {RNA1310_19778} {RNA815_39052}

Mlig455_069016 {REF} {Length: 2124} {Human: ENSG00000267909, CCDC177, coiled-coil domain containing 177, [Score=71.2, Expect=1e-12]} {Mouse: ENSMUSG00000062961, Ccdc177, coiled-coil domain containing 177, [Score=64.7, Expect=8e-11]} {Smed: dd_Smed_v6_9816_0_1, dd_Smed_v6_9816_0_1, [Score=56.2, Expect=1e-08]} {RNA1509_53422} {RNA1310_19778} {RNA815_39052}
5. MligTC455_34804 296 6.17 Mlig455_006896

Neo: -

Age: -

0.966 - - - - - 0.966 Mlig455_006896 {REF} {Length: 7567} {TRANSSPLICED} {Smed: dd_Smed_v6_9784_0_3, dd_Smed_v6_9784_0_3, [RH, Score=75.9, Expect=2e-13]} {RNA1509_29125, RNA1509_4353} {RNA1310_2901, RNA1509_29125} {RNA1509_29125, RNA815_843}
6. MligTC455_25487 73 1.52 Mlig455_006779

Neo: -

Age: -

TTC28 0.963 - - - - - 0.963 Mlig455_006779 {REF} {Length: 5941} {Pfam: Tetratricopeptide repeat [PF13424.8, score=84.4]; Tetratricopeptide repeat [PF13176.8, score=56.0]; Tetratricopeptide repeat [PF07719.19, score=55.9]; Tetratricopeptide repeat [PF00515.30, score=48.2]; Tetratricopeptide repeat [PF13181.8, score=43.2]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=97.4, Expect=2e-19]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=97.8, Expect=9e-20]} {Dmel: FBgn0262719, CG43163, [Score=98.6, Expect=4e-20]} {RNA1509_24017} {RNA1310_15919} {RNA815_6453}
7. MligTC455_28220 417 8.69 Mlig455_062052, Mlig455_068808

Neo: -

Age: Up-Down-Down

0.956 - - - - - 0.956

Mlig455_062052 {REF} {Length: 183} {NoTransDecoderORF} {RNA1509_40964} {RNA1310_35984} {RNA815_17605}

Mlig455_068808 {REF} {Length: 4492} {Pfam: Phage integrase family [PF00589.24, score=20.6]} {RNA1509_40964} {RNA1310_35984} {RNA815_17605}
8. MligTC455_53154 84 1.74 Mlig455_043500

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_043500 {REF} {Length: 1914} {RNA1509_42280} {RNA1310_99128} {RNA815_61343}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA