TomoSeq data search

Data search

Results for MligTC455_34212

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34212	240	5.01	Mlig455_068457	Neo: - Age: Up-Down-Up	ABCA2	Mlig455_068457 {REF} {Length: 3147} {TRANSSPLICED} {Pfam: ABC-2 family transporter protein [PF12698.9, score=107.2]; ABC-2 type transporter [PF01061.26, score=104.7]; ABC transporter [PF00005.29, score=101.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=34.3]} {Human: ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=122, Expect=7e-28]; ENSG00000144452, ABCA12, ATP binding cassette subfamily A member 12, [Score=122, Expect=8e-28]} {Mouse: ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=123, Expect=3e-28]; ENSMUSG00000050296, Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, [Score=120, Expect=2e-27]; ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=119, Expect=4e-27]} {Dmel: FBgn0039594, CG9990, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_10304_0_1, dd_Smed_v6_10304_0_1, [Score=111, Expect=7e-25]} {RNA1509_46884} {RNA1310_8391} {RNA815_2834}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34212

240

5.01

Mlig455_068457

Neo: -

Age: Up-Down-Up

ABCA2

Mlig455_068457 {REF} {Length: 3147} {TRANSSPLICED} {Pfam: ABC-2 family transporter protein [PF12698.9, score=107.2]; ABC-2 type transporter [PF01061.26, score=104.7]; ABC transporter [PF00005.29, score=101.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=34.3]} {Human: ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=122, Expect=7e-28]; ENSG00000144452, ABCA12, ATP binding cassette subfamily A member 12, [Score=122, Expect=8e-28]} {Mouse: ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=123, Expect=3e-28]; ENSMUSG00000050296, Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, [Score=120, Expect=2e-27]; ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=119, Expect=4e-27]} {Dmel: FBgn0039594, CG9990, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_10304_0_1, dd_Smed_v6_10304_0_1, [Score=111, Expect=7e-25]} {RNA1509_46884} {RNA1310_8391} {RNA815_2834}

Cumulative graph for MligTC455_34212

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.303	2.974	0.82285	1.00000
RegionR2	1.367	2.974	0.08941	0.36680
RegionR3	1.054	2.974	0.04685	0.37900
RegionR4	-1.077	2.974	0.18297	0.45450
RegionR5	0.613	2.974	0.20236	0.49407
RegionR6	0.611	2.974	0.27606	0.86622
RegionR7	-2.087	2.974	0.07737	0.53654
RegionR8	-0.784	2.974	0.53448	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.278	2.974	0.46563	1.00000
RegenerationR2	0.436	2.974	0.46626	0.85585
RegenerationR3	0.735	2.974	0.24674	0.68068
RegenerationR4	1.019	2.974	0.16225	0.59565
RegenerationR5	0.005	2.974	0.97618	1.00000
RegenerationR6	0.91	2.974	0.16011	0.48851
RegenerationBL	0.941	2.974	0.45007	0.81705
RegenerationTP	1.237	2.974	0.35493	0.79629

Genes with expression patterns similar to MligTC455_34212

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34212	240	5.01	Mlig455_068457	Neo: - Age: Up-Down-Up	ABCA2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_068457 {REF} {Length: 3147} {TRANSSPLICED} {Pfam: ABC-2 family transporter protein [PF12698.9, score=107.2]; ABC-2 type transporter [PF01061.26, score=104.7]; ABC transporter [PF00005.29, score=101.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=34.3]} {Human: ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=122, Expect=7e-28]; ENSG00000144452, ABCA12, ATP binding cassette subfamily A member 12, [Score=122, Expect=8e-28]} {Mouse: ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=123, Expect=3e-28]; ENSMUSG00000050296, Abca12, ATP-binding cassette, sub-family A (ABC1), member 12, [Score=120, Expect=2e-27]; ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=119, Expect=4e-27]} {Dmel: FBgn0039594, CG9990, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_10304_0_1, dd_Smed_v6_10304_0_1, [Score=111, Expect=7e-25]} {RNA1509_46884} {RNA1310_8391} {RNA815_2834}
2.	MligTC455_27370	182	3.79	Mlig455_035501	Neo: - Age: -	CEP97	0.973	-	-	0.973	-	-	-	Mlig455_035501 {REF} {Length: 4465} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=82.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=59.4]; Leucine rich repeat [PF13855.8, score=53.6]; IQ calmodulin-binding motif [PF00612.29, score=22.4]} {Human: ENSG00000182504, CEP97, centrosomal protein 97, [RH, Score=282, Expect=4e-82]} {Mouse: ENSMUSG00000022604, Cep97, centrosomal protein 97, [RH, Score=287, Expect=8e-84]} {Dmel: FBgn0031575, Cep97, Centrosomal protein 97kDa, [RH, Score=223, Expect=1e-61]} {Celegans: WBGene00019842, R02F11.4, [RH, Score=93.2, Expect=2e-19]} {Smed: dd_Smed_v6_11066_0_1, dd_Smed_v6_11066_0_1, [RH, Score=270, Expect=3e-79]} {RNA1509_13986, RNA1509_52319} {RNA1310_6845, RNA1509_13986, RNA1509_52319} {RNA1509_13986, RNA1509_52319, RNA815_4404.1}
3.	MligTC455_23337	263	5.49	Mlig455_056639	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.419		0.97	-	-	-	-	0.970	-	Mlig455_056639 {REF} {Length: 1528} {Pfam: PLAC8 family [PF04749.19, score=74.3]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=112, Expect=9e-34]} {RNA1509_5161} {RNA1310_34575.1, RNA1509_5161} {RNA1509_5161, RNA815_15567.1}
4.	MligTC455_19087	349	7.26	Mlig455_002102	Neo: - Age: -	MEGF6	0.958	-	-	-	-	0.958	-	Mlig455_002102 {REF} {Length: 7462} {Pfam: Laminin EGF domain [PF00053.26, score=134.2]; Coagulation Factor Xa inhibitory site [PF14670.8, score=113.5]; Calcium-binding EGF domain [PF07645.17, score=78.8]; Complement Clr-like EGF-like [PF12662.9, score=76.7]; Human growth factor-like EGF [PF12661.9, score=24.2]; EGF domain [PF12947.9, score=19.3]} {Human: ENSG00000162591, MEGF6, multiple EGF like domains 6, [RH, Score=980, Expect=0.0]} {Mouse: ENSMUSG00000057751, Megf6, multiple EGF-like-domains 6, [RH, Score=1011, Expect=0.0]} {Dmel: FBgn0027594, drpr, draper, [RH, Score=434, Expect=1e-130]} {Celegans: WBGene00013416, Y64G10A.7, [Score=1076, Expect=0.0]} {Smed: dd_Smed_v6_5630_0_1, dd_Smed_v6_5630_0_1, [Score=736, Expect=0.0]} {RNA1509_42688} {RNA1310_794} {RNA815_8704}