TomoSeq data search

Data search

Results for MligTC455_34248

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34248

312

6.50

Mlig455_056085

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.730

Region-enriched R3: 2.759/0.03324

MALRD1

Mlig455_056085 {REF} {Length: 27083} {Pfam: MAM domain, meprin/A5/mu [PF00629.25, score=3266.0]; Low-density lipoprotein receptor domain class A [PF00057.20, score=153.1]} {Human: ENSG00000204740, MALRD1, MAM and LDL receptor class A domain containing 1, [Score=416, Expect=5e-116]} {Mouse: ENSMUSG00000075520, Malrd1, MAM and LDL receptor class A domain containing 1, [Score=388, Expect=2e-107]} {Dmel: FBgn0040505, Alk, Anaplastic lymphoma kinase, [Score=98.6, Expect=2e-19]} {RNA1509_339} {RNA1310_2} {RNA815_2}

Cumulative graph for MligTC455_34248

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.438	3.28	0.16277	0.78564
RegionR2	0.377	3.28	0.66362	0.99429
RegionR3	2.759	3.28	0.00117	0.03324
RegionR4	0.575	3.28	0.54955	0.87043
RegionR5	0.753	3.28	0.36871	0.72134
RegionR6	0.521	3.28	0.53439	1.00000
RegionR7	-1.598	3.28	0.99591	1.00000
RegionR8	-5.825	3.28	0.05960	0.47677

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.548	3.28	0.19945	0.93959
RegenerationR2	-0.979	3.28	0.35647	0.78659
RegenerationR3	-1.413	3.28	0.14910	0.57808
RegenerationR4	-0.936	3.28	0.38293	0.80316
RegenerationR5	-0.723	3.28	0.45284	0.83237
RegenerationR6	0.221	3.28	0.82860	0.99022
RegenerationBL	0.957	3.28	0.59936	0.94691
RegenerationTP	4.965	3.28	0.01069	0.17553

Genes with expression patterns similar to MligTC455_34248

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34248	312	6.5	Mlig455_056085	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.730 Region-enriched R3: 2.759/0.03324	MALRD1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_056085 {REF} {Length: 27083} {Pfam: MAM domain, meprin/A5/mu [PF00629.25, score=3266.0]; Low-density lipoprotein receptor domain class A [PF00057.20, score=153.1]} {Human: ENSG00000204740, MALRD1, MAM and LDL receptor class A domain containing 1, [Score=416, Expect=5e-116]} {Mouse: ENSMUSG00000075520, Malrd1, MAM and LDL receptor class A domain containing 1, [Score=388, Expect=2e-107]} {Dmel: FBgn0040505, Alk, Anaplastic lymphoma kinase, [Score=98.6, Expect=2e-19]} {RNA1509_339} {RNA1310_2} {RNA815_2}
2.	MligTC455_34247	392	8.17	Mlig455_055985	Neo: - Age: Up-Down-Down Region-enriched R3: 2.845/0.00559	MALRD1	3.808	0.972	0.971	-	-	0.927	0.938	Mlig455_055985 {REF} {Length: 13804} {Pfam: MAM domain, meprin/A5/mu [PF00629.25, score=1742.1]; Low-density lipoprotein receptor domain class A [PF00057.20, score=251.5]} {Human: ENSG00000204740, MALRD1, MAM and LDL receptor class A domain containing 1, [Score=741, Expect=0.0]} {Mouse: ENSMUSG00000075520, Malrd1, MAM and LDL receptor class A domain containing 1, [Score=718, Expect=0.0]} {Dmel: FBgn0040505, Alk, Anaplastic lymphoma kinase, [Score=97.1, Expect=3e-19]} {RNA1509_339} {RNA1310_2} {RNA815_2}
3.	MligTC455_34548	892	18.58	Mlig455_037149, Mlig455_052297	Neo: - Age: Up-Down-Down Region-enriched R3: 1.952/0.03060		2.514	-	0.855	-	0.706	-	0.953	Mlig455_037149 {REF} {Length: 10460} {TRANSSPLICED} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=31.2]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=55.8, Expect=5e-07]} {RNA1509_40938, RNA1509_4906} {RNA1310_88.1, RNA1509_40938} {RNA1509_40938, RNA815_214} Mlig455_052297 {REF} {Length: 9432} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=36.3]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=52.0, Expect=7e-06]} {RNA1509_4906} {RNA1310_88.1} {RNA815_214}
4.	MligTC455_34547	437	9.11	Mlig455_052252	Neo: - Age: - Region-enriched R3: 2.304/0.02662		2.51	-	0.847	-	0.707	-	0.956	Mlig455_052252 {REF} {Length: 1475} {RNA1509_4906} {RNA1310_88.1} {RNA815_214}
5.	MligTC455_26913	1252	26.09	Mlig455_035418	Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.504 Region-enriched R3: 1.751/0.00053 Region-enriched R4: 1.310/0.04608		1.865	-	0.969	-	-	-	0.896	Mlig455_035418 {REF} {Length: 4935} {Pfam: Fibronectin type III domain [PF00041.23, score=99.3]} {Mouse: ENSMUSG00000026193, Fn1, fibronectin 1, [Score=53.1, Expect=1e-06]} {RNA1509_5914, RNA1509_59574} {RNA1310_11509.1, RNA1509_59574} {RNA1509_59574, RNA815_4107}
6.	MligTC455_50387	1074	22.38	Mlig455_018618	Neo: - Age: logFC(26M/2M)=0.362 Region-enriched R4: 2.247/0.00001 Region-enriched R3: 1.935/0.00000	SLC8B1	1.865	-	0.908	-	-	-	0.957	Mlig455_018618 {REF} {Length: 2020} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=96.0]} {Human: ENSG00000089060, SLC8B1, solute carrier family 8 member B1, [RH, Score=214, Expect=1e-62]} {Mouse: ENSMUSG00000032754, Slc8b1, solute carrier family 8 (sodium/lithium/calcium exchanger), member B1, [RH, Score=220, Expect=4e-65]} {Dmel: FBgn0033324, CG14744, [Score=126, Expect=8e-31]} {Celegans: WBGene00003572, ncx-7, Putative sodium/calcium exchanger 7, [RH, Score=168, Expect=3e-45]} {Smed: dd_Smed_v6_1009_1_1, dd_Smed_v6_1009_1_1, [RH, Score=254, Expect=2e-80]} {RNA1509_17694, RNA1509_27887, RNA1509_3073} {RNA1310_3165.1, RNA1509_17694, RNA1509_27887} {RNA1509_17694, RNA1509_27887, RNA815_1390}
7.	MligTC455_19866	483	10.05	Mlig455_053987	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.360 Region-enriched R4: 2.346/0.01408 Region-enriched R3: 2.007/0.01395		1.769	-	0.819	-	-	-	0.950	Mlig455_053987 {REF} {Length: 3038} {RNA1509_43528} {RNA1310_35262.2, RNA1509_43528} {RNA1509_43528, RNA815_26662}
8.	MligTC455_34295	1251	26.06	Mlig455_039417	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-1.176 Region-enriched R3: 2.357/0.00048 Region-enriched R4: 1.872/0.01857		1.755	-	-	-	0.799	-	0.956	Mlig455_039417 {REF} {Length: 666} {RNA1509_26409, RNA1509_26731, RNA1509_44065, RNA1509_51827} {RNA1310_54443, RNA1509_26409, RNA1509_26731, RNA1509_44065, RNA1509_51827} {RNA1509_26409, RNA1509_26731, RNA1509_44065, RNA1509_51827, RNA815_29054}
9.	MligTC455_25772	151	3.15	Mlig455_067364	Neo: - Age: -		1.714	-	0.760	-	-	-	0.954	Mlig455_067364 {REF} {Length: 3815} {RNA1509_5822} {RNA1310_3594} {RNA815_4411}
10.	MligTC455_15776	390	8.13	Mlig455_029536, Mlig455_043042	Neo: - Age: -	UBE4A	0.974	-	-	-	0.974	-	-	Mlig455_029536 {REF} {Length: 3713} {TRANSSPLICED} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=107.3]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [Score=62.8, Expect=6e-10]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [Score=65.9, Expect=7e-11]} {Dmel: FBgn0028467, CG11070, [Score=50.1, Expect=4e-06]} {RNA1509_13612} {RNA1310_4756} {RNA815_9670} Mlig455_043042 {REF} {Length: 4810} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=424.1]; U-box domain [PF04564.17, score=96.4]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [RH, Score=441, Expect=8e-137]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [RH, Score=447, Expect=2e-139]} {Dmel: FBgn0028467, CG11070, [RH, Score=373, Expect=1e-112]} {Celegans: WBGene00006734, ufd-2, Probable ubiquitin conjugation factor E4, [Score=171, Expect=2e-43]} {Smed: dd_Smed_v6_4558_0_1, dd_Smed_v6_4558_0_1, [RH, Score=424, Expect=1e-131]} {RNA1509_24289, RNA1509_25538} {RNA1310_4756, RNA1509_24289} {RNA1509_24289, RNA815_9670}
11.	MligTC455_07179	20	0.42	Mlig455_004102	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_004102 {REF} {Length: 945} {NoTransDecoderORF} {RNA1310_78729} {RNA815_47522}
12.	MligTC455_28312	38	0.79	Mlig455_058818	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_058818 {REF} {Length: 639} {NoTransDecoderORF} {RNA1509_6116} {RNA1310_17411} {RNA815_134.1}
13.	MligTC455_33102	203	4.22	Mlig455_049935	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.705 Region-enriched R3: 2.766/0.00893 Region-enriched R5: 2.062/0.04149	SLC47A1	0.955	-	-	-	-	-	0.955	Mlig455_049935 {REF} {Length: 2899} {Pfam: MatE [PF01554.20, score=111.7]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=191, Expect=4e-53]} {Mouse: ENSMUSG00000010122, Slc47a1, solute carrier family 47, member 1, [Score=201, Expect=9e-57]; ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [Score=191, Expect=2e-53]} {Smed: dd_Smed_v6_8335_0_4, dd_Smed_v6_8335_0_4, [Score=206, Expect=3e-59]} {RNA1509_36610} {RNA1310_12106.1} {RNA815_4765}
14.	MligTC455_12710	210	4.37	Mlig455_024851	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.218 Region-enriched R3: 4.122/0.01130 Region-enriched R5: 3.991/0.00222 Region-enriched R4: 3.139/0.03299		0.952	-	-	-	-	0.952	-	Mlig455_024851 {REF} {Length: 1266} {RNA1509_35083} {RNA1310_70627.1} {RNA815_15963}

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