TomoSeq data search

Data search

Results for MligTC455_34282

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34282	11497	239.51	Mlig455_058016, Mlig455_058207	Neo: - Age: -	CSRP2	Mlig455_058016 {REF} {Length: 1598} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=172, Expect=2e-54]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=164, Expect=6e-51]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=171, Expect=4e-54]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=166, Expect=6e-52]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [RH, Score=179, Expect=3e-54]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [RH, Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [RH, Score=226, Expect=4e-76]} {RNA1509_5127, RNA1509_788} {RNA1310_19220, RNA1509_5127} {RNA1509_5127, RNA815_7609.1} Mlig455_058207 {REF} {Length: 1641} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=172, Expect=2e-54]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=164, Expect=6e-51]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=171, Expect=4e-54]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=166, Expect=6e-52]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [RH, Score=179, Expect=3e-54]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [RH, Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [RH, Score=226, Expect=4e-76]} {RNA1509_788} {RNA1310_19220, RNA1509_788} {RNA1509_788, RNA815_7609.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34282

11497

239.51

Mlig455_058016, Mlig455_058207

Neo: -

Age: -

CSRP2

Mlig455_058016 {REF} {Length: 1598} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=172, Expect=2e-54]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=164, Expect=6e-51]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=171, Expect=4e-54]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=166, Expect=6e-52]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [RH, Score=179, Expect=3e-54]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [RH, Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [RH, Score=226, Expect=4e-76]} {RNA1509_5127, RNA1509_788} {RNA1310_19220, RNA1509_5127} {RNA1509_5127, RNA815_7609.1}

Mlig455_058207 {REF} {Length: 1641} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=172, Expect=2e-54]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=164, Expect=6e-51]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=171, Expect=4e-54]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=166, Expect=6e-52]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [RH, Score=179, Expect=3e-54]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [RH, Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [RH, Score=226, Expect=4e-76]} {RNA1509_788} {RNA1310_19220, RNA1509_788} {RNA1509_788, RNA815_7609.1}

Cumulative graph for MligTC455_34282

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.2	7.942	0.00963	0.28805
RegionR2	-0.251	7.942	0.42405	0.81461
RegionR3	0.086	7.942	0.74875	1.00000
RegionR4	0.082	7.942	0.79642	1.00000
RegionR5	-0.614	7.942	0.03006	0.12972
RegionR6	0.511	7.942	0.05412	0.43641
RegionR7	0.953	7.942	0.00021	0.01033
RegionR8	0.433	7.942	0.12842	0.65781

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.515	7.942	0.36700	1.00000
RegenerationR2	-0.245	7.942	0.48414	0.86491
RegenerationR3	-0.167	7.942	0.63790	0.92414
RegenerationR4	-0.276	7.942	0.45099	0.84257
RegenerationR5	0.058	7.942	0.86802	1.00000
RegenerationR6	-0.458	7.942	0.19349	0.53245
RegenerationBL	-0.842	7.942	0.00847	0.09104
RegenerationTP	0.096	7.942	0.76967	1.00000

Genes with expression patterns similar to MligTC455_34282

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34282	11497	239.51	Mlig455_058016, Mlig455_058207	Neo: - Age: -	CSRP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_058016 {REF} {Length: 1598} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=172, Expect=2e-54]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=164, Expect=6e-51]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=171, Expect=4e-54]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=166, Expect=6e-52]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [RH, Score=179, Expect=3e-54]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [RH, Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [RH, Score=226, Expect=4e-76]} {RNA1509_5127, RNA1509_788} {RNA1310_19220, RNA1509_5127} {RNA1509_5127, RNA815_7609.1} Mlig455_058207 {REF} {Length: 1641} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=172, Expect=2e-54]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=164, Expect=6e-51]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=171, Expect=4e-54]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=166, Expect=6e-52]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [RH, Score=179, Expect=3e-54]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [RH, Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [RH, Score=226, Expect=4e-76]} {RNA1509_788} {RNA1310_19220, RNA1509_788} {RNA1509_788, RNA815_7609.1}
2.	MligTC455_34281	5873	122.36	Mlig455_058179	Neo: - Age: Down-Down-Up	CSRP2	5.968	0.996	0.997	0.999	0.980	0.997	0.999	Mlig455_058179 {REF} {Length: 1647} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=171, Expect=7e-54]} {Mouse: ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=169, Expect=2e-53]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=164, Expect=4e-51]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [RH, Score=178, Expect=2e-53]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [RH, Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [RH, Score=224, Expect=2e-75]} {RNA1509_788} {RNA1310_19220} {RNA815_7609.1}
3.	MligTC455_23665	5561	115.86	Mlig455_051942	Neo: - Age: -	CD81	1.772	-	-	0.805	0.967	-	-	Mlig455_051942 {REF} {Length: 1863} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=145.7]} {Human: ENSG00000110651, CD81, CD81 molecule, [RH, Score=97.4, Expect=8e-24]} {Mouse: ENSMUSG00000037706, Cd81, CD81 antigen, [RH, Score=97.4, Expect=5e-24]; ENSMUSG00000027858, Tspan2, tetraspanin 2, [RH, Score=96.7, Expect=6e-24]} {Dmel: FBgn0027865, Tsp96F, Tetraspanin 96F, [RH, Score=105, Expect=6e-27]} {Celegans: WBGene00006632, tsp-6, Tetraspanin, [Score=70.1, Expect=3e-14]} {Smed: dd_Smed_v6_4080_0_1, dd_Smed_v6_4080_0_1, [RH, Score=132, Expect=8e-38]} {RNA1509_7055} {RNA1310_13698} {RNA815_10346.1}
4.	MligTC455_04221	189	3.93	Mlig455_036494, Mlig455_037536	Neo: - Age: Down-Up-Up, logFC(26M/2M)=2.401		1.764	-	-	-	-	0.811	0.953	Mlig455_036494 {REF} {Length: 1287} {Pfam: Innexin [PF00876.20, score=336.4]} {Dmel: FBgn0085387, shakB, shaking B, [RH, Score=113, Expect=4e-27]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=231, Expect=1e-70]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [RH, Score=357, Expect=6e-119]} {RNA1509_17737} {RNA1310_16884} {RNA815_8573} Mlig455_037536 {REF} {Length: 1859} {Pfam: Innexin [PF00876.20, score=336.4]} {Dmel: FBgn0085387, shakB, shaking B, [RH, Score=113, Expect=4e-27]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=231, Expect=1e-70]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [RH, Score=357, Expect=6e-119]} {RNA1509_17737} {RNA1310_16884} {RNA815_8573}
5.	MligTC455_48877	414	8.63	Mlig455_064220	Neo: - Age: -	CACNB4	0.955	-	-	-	-	-	0.955	Mlig455_064220 {REF} {Length: 3341} {Pfam: Guanylate kinase [PF00625.23, score=139.2]; Voltage gated calcium channel subunit beta domain 4Aa N terminal [PF12052.10, score=24.3]} {Human: ENSG00000182389, CACNB4, calcium voltage-gated channel auxiliary subunit beta 4, [RH, Score=318, Expect=1e-103]} {Mouse: ENSMUSG00000020882, Cacnb1, calcium channel, voltage-dependent, beta 1 subunit, [Score=325, Expect=2e-104]; ENSMUSG00000057914, Cacnb2, calcium channel, voltage-dependent, beta 2 subunit, [Score=322, Expect=1e-101]; ENSMUSG00000017412, Cacnb4, calcium channel, voltage-dependent, beta 4 subunit, [Score=318, Expect=2e-101]; ENSMUSG00000003352, Cacnb3, calcium channel, voltage-dependent, beta 3 subunit, [Score=315, Expect=2e-100]} {Dmel: FBgn0259822, Ca-beta, Ca2+-channel-protein-beta-subunit, [Score=332, Expect=7e-108]} {Celegans: WBGene00000368, ccb-1, Calcium Channel, Beta subunit, [Score=328, Expect=4e-105]} {Smed: dd_Smed_v6_9267_0_1, dd_Smed_v6_9267_0_1, [Score=342, Expect=3e-110]} {RNA1509_13952} {RNA1310_9640} {RNA815_20879}
6.	MligTC455_23161	308	6.41	Mlig455_008114	Neo: - Age: logFC(26M/2M)=-0.619 Regeneration-downregulated R2: -2.232 Regeneration-depleted R2: -2.232		0.95	-	-	-	-	-	0.950	Mlig455_008114 {REF} {Length: 1229} {TRANSSPLICED} {RNA1509_26396} {RNA1310_29311} {RNA815_12314}