TomoSeq data search

Data search

Results for MligTC455_34313

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34313	244	5.09	Mlig455_061315	Neo: - Age: -		Mlig455_061315 {REF} {Length: 1497} {RNA1509_26825} {RNA1310_21859} {RNA815_14274}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_34313

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.845	2.751	0.45985	1.00000
RegionR2	0.591	2.751	0.38477	0.77982
RegionR3	-1.294	2.751	0.19511	0.73331
RegionR4	-0.181	2.751	0.83590	1.00000
RegionR5	-0.812	2.751	0.34696	0.69574
RegionR6	1.038	2.751	0.08280	0.53154
RegionR7	1.611	2.751	0.03129	0.33665
RegionR8	0.892	2.751	0.44312	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.876	2.751	0.52401	1.00000
RegenerationR2	-0.338	2.751	0.44035	0.84011
RegenerationR3	1.659	2.751	0.02037	0.26092
RegenerationR4	1.315	2.751	0.02792	0.26817
RegenerationR5	1.094	2.751	0.07631	0.43165
RegenerationR6	0.153	2.751	0.78607	0.97034
RegenerationBL	-1.794	2.751	0.03891	0.22350
RegenerationTP	0.887	2.751	0.20060	0.64146

Genes with expression patterns similar to MligTC455_34313

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34313	244	5.09	Mlig455_061315	Neo: - Age: -		5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_061315 {REF} {Length: 1497} {RNA1509_26825} {RNA1310_21859} {RNA815_14274}
2.	MligTC455_42463	367	7.65	Mlig455_069188	Neo: - Age: - Region-enriched R7: 1.879/0.00540 Region-enriched R2: 1.715/0.02219	GNB4	0.953	-	-	-	0.953	-	-	Mlig455_069188 {REF} {Length: 2146} {Pfam: WD domain, G-beta repeat [PF00400.34, score=116.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.0]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [Score=348, Expect=2e-118]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=345, Expect=4e-117]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=344, Expect=9e-117]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=336, Expect=1e-113]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=346, Expect=6e-117]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=344, Expect=6e-117]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=337, Expect=3e-114]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=332, Expect=5e-112]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=356, Expect=1e-121]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=355, Expect=2e-121]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-129]} {RNA1509_5337} {RNA1310_9924.1} {RNA815_3556}
3.	MligTC455_34178	255	5.32	Mlig455_061293	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_061293 {REF} {Length: 904} {TRANSSPLICED} {Pfam: IclR helix-turn-helix domain [PF09339.12, score=21.1]; Homeodomain-like domain [PF13565.8, score=20.1]; Helix-turn-helix domain [PF13936.8, score=18.4]; Winged helix-turn-helix DNA-binding [PF13412.8, score=18.2]} {RNA1509_57191} {RNA1310_32310.1} {RNA815_18533}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_34313

244

5.09

Mlig455_061315

Neo: -

Age: -

1.000

Mlig455_061315 {REF} {Length: 1497} {RNA1509_26825} {RNA1310_21859} {RNA815_14274}

MligTC455_42463

367

7.65

Mlig455_069188

Neo: -

Age: -

Region-enriched R7: 1.879/0.00540
Region-enriched R2: 1.715/0.02219

GNB4

0.953

Mlig455_069188 {REF} {Length: 2146} {Pfam: WD domain, G-beta repeat [PF00400.34, score=116.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.0]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [Score=348, Expect=2e-118]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=345, Expect=4e-117]; ENSG00000078369, GNB1, G protein subunit beta 1, [Score=344, Expect=9e-117]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=336, Expect=1e-113]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=346, Expect=6e-117]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=344, Expect=6e-117]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=337, Expect=3e-114]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=332, Expect=5e-112]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=356, Expect=1e-121]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=355, Expect=2e-121]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=375, Expect=4e-129]} {RNA1509_5337} {RNA1310_9924.1} {RNA815_3556}

MligTC455_34178

255

5.32

Mlig455_061293

Neo: -

Age: -

0.95

0.950

Mlig455_061293 {REF} {Length: 904} {TRANSSPLICED} {Pfam: IclR helix-turn-helix domain [PF09339.12, score=21.1]; Homeodomain-like domain [PF13565.8, score=20.1]; Helix-turn-helix domain [PF13936.8, score=18.4]; Winged helix-turn-helix DNA-binding [PF13412.8, score=18.2]} {RNA1509_57191} {RNA1310_32310.1} {RNA815_18533}