Data search
Results for MligTC455_34323
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34323 | 22218 | 462.87 | Mlig455_011241 | Neo: Int S/G2/M Age: - |
PLEC | Mlig455_011241 {REF} {Length: 668} {TRANSSPLICED} {Pfam: Plectin/S10 domain [PF03501.17, score=132.4]} {Human: ENSG00000178209, PLEC, plectin, [Score=135, Expect=8e-37]; ENSG00000124614, RPS10, ribosomal protein S10, [Score=134, Expect=4e-40]; ENSG00000270800, RPS10-NUDT3, RPS10-NUDT3 readthrough, [Score=133, Expect=2e-38]} {Mouse: ENSMUSG00000052146, Rps10, ribosomal protein S10, [RH, Score=132, Expect=3e-40]} {Dmel: FBgn0027494, RpS10a, Ribosomal protein S10a, [RH, Score=127, Expect=4e-38]} {Celegans: WBGene00004479, rps-10, Ribosomal Protein, Small subunit, [RH, Score=121, Expect=6e-36]} {Smed: dd_Smed_v6_117_0_1, dd_Smed_v6_117_0_1, [Score=132, Expect=2e-40]} {RNA1509_382} {RNA1310_53110} {RNA815_28448} |
Cumulative graph for MligTC455_34323
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.312 | 8.946 | 0.43345 | 1.00000 | |
| RegionR2 | 0.031 | 8.946 | 0.92360 | 1.00000 | |
| RegionR3 | 0.344 | 8.946 | 0.22568 | 0.76751 | |
| RegionR4 | 0.097 | 8.946 | 0.75500 | 1.00000 | |
| RegionR5 | -0.133 | 8.946 | 0.64000 | 0.99241 | |
| RegionR6 | 0.155 | 8.946 | 0.58359 | 1.00000 | |
| RegionR7 | 0.24 | 8.946 | 0.38360 | 1.00000 | |
| RegionR8 | -0.423 | 8.946 | 0.16879 | 0.74152 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.093 | 8.946 | 0.02500 | 0.59669 | |
| RegenerationR2 | -0.664 | 8.946 | 0.07237 | 0.43670 | |
| RegenerationR3 | -0.477 | 8.946 | 0.19969 | 0.63454 | |
| RegenerationR4 | -0.374 | 8.946 | 0.32456 | 0.76181 | |
| RegenerationR5 | -0.487 | 8.946 | 0.19042 | 0.62121 | |
| RegenerationR6 | -0.476 | 8.946 | 0.20264 | 0.54427 | |
| RegenerationBL | -0.349 | 8.946 | 0.28159 | 0.64252 | |
| RegenerationTP | -0.367 | 8.946 | 0.29279 | 0.73804 |
Genes with expression patterns similar to MligTC455_34323
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34323 | 22218 | 462.87 | Mlig455_011241 | Neo: Int S/G2/M Age: - |
PLEC | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011241 {REF} {Length: 668} {TRANSSPLICED} {Pfam: Plectin/S10 domain [PF03501.17, score=132.4]} {Human: ENSG00000178209, PLEC, plectin, [Score=135, Expect=8e-37]; ENSG00000124614, RPS10, ribosomal protein S10, [Score=134, Expect=4e-40]; ENSG00000270800, RPS10-NUDT3, RPS10-NUDT3 readthrough, [Score=133, Expect=2e-38]} {Mouse: ENSMUSG00000052146, Rps10, ribosomal protein S10, [RH, Score=132, Expect=3e-40]} {Dmel: FBgn0027494, RpS10a, Ribosomal protein S10a, [RH, Score=127, Expect=4e-38]} {Celegans: WBGene00004479, rps-10, Ribosomal Protein, Small subunit, [RH, Score=121, Expect=6e-36]} {Smed: dd_Smed_v6_117_0_1, dd_Smed_v6_117_0_1, [Score=132, Expect=2e-40]} {RNA1509_382} {RNA1310_53110} {RNA815_28448} |
| 2. | MligTC455_25506 | 15471 | 322.3 | Mlig455_061821 | Neo: - |
RPS23 | 1.694 | - | - | 0.741 | - | - | 0.953 | Mlig455_061821 {REF} {Length: 636} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=122.5]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [Score=197, Expect=2e-65]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [Score=197, Expect=1e-65]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [Score=202, Expect=4e-68]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [Score=202, Expect=6e-68]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [Score=205, Expect=3e-69]} {RNA1509_18777} {RNA1310_55450.1} {RNA815_25860.1} |
| 3. | MligTC455_25505 | 15472 | 322.33 | Mlig455_061784 | Neo: - Age: logFC(26M/2M)=0.327 |
RPS23 | 1.691 | - | - | 0.741 | - | - | 0.950 | Mlig455_061784 {REF} {Length: 644} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=9e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=6e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=6e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=1e-90]} {RNA1509_6381} {RNA1310_55450.1, RNA1509_6381} {RNA1509_6381, RNA815_25860.1} |
| 4. | MligTC455_31639 | 929 | 19.35 | Mlig455_010618 | Neo: - Age: Down-Up-Down |
0.967 | - | - | - | 0.967 | - | - | Mlig455_010618 {REF} {Length: 905} {NoTransDecoderORF} {RNA1509_13302, RNA1509_42182} {RNA1310_51095, RNA1509_13302} {RNA1509_13302, RNA815_22817} |
Berezikov Lab - 2020-2021 © ERIBA