M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_34345

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34345 1255 26.14 Mlig455_028400, Mlig455_028413, Mlig455_028435

Neo: -

Age: -

 GRTP1

Mlig455_028400 {REF} {Length: 2381} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_35493} {RNA1310_12040.1} {RNA815_7041}

Mlig455_028413 {REF} {Length: 2486} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_35493} {RNA1310_12040.1} {RNA815_7041}

Mlig455_028435 {REF} {Length: 2379} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_23874, RNA1509_35493, RNA1509_59604} {RNA1310_12040.1, RNA1509_23874, RNA1509_59604} {RNA1509_23874, RNA1509_59604, RNA815_7041}

Cumulative graph for MligTC455_34345

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.484 4.915 0.11839 0.70794
RegionR2 0.826 4.915 0.07410 0.33232
RegionR3 0.529 4.915 0.17842 0.70781
RegionR4 -0.81 4.915 0.08094 0.26699
RegionR5 -0.306 4.915 0.40426 0.76219
RegionR6 0.06 4.915 0.87386 1.00000
RegionR7 0.521 4.915 0.18758 0.78978
RegionR8 0.663 4.915 0.13984 0.68322

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.026 4.915 0.99193 1.00000
RegenerationR2 0.049 4.915 0.90609 1.00000
RegenerationR3 -0.249 4.915 0.59999 0.90785
RegenerationR4 0.082 4.915 0.87040 1.00000
RegenerationR5 0.175 4.915 0.70271 0.95237
RegenerationR6 -0.449 4.915 0.36179 0.70618
RegenerationBL -1.351 4.915 0.01863 0.14671
RegenerationTP 0.209 4.915 0.67001 1.00000


Genes with expression patterns similar to MligTC455_34345

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34345 1255 26.14 Mlig455_028400, Mlig455_028413, Mlig455_028435

Neo: -

Age: -

 GRTP1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_028400 {REF} {Length: 2381} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_35493} {RNA1310_12040.1} {RNA815_7041}

Mlig455_028413 {REF} {Length: 2486} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_35493} {RNA1310_12040.1} {RNA815_7041}

Mlig455_028435 {REF} {Length: 2379} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_23874, RNA1509_35493, RNA1509_59604} {RNA1310_12040.1, RNA1509_23874, RNA1509_59604} {RNA1509_23874, RNA1509_59604, RNA815_7041}
2. MligTC455_13280 164 3.42 Mlig455_042501

Neo: -

Age: Down-Up-Down

 1.872 - - - 0.922 - 0.950 Mlig455_042501 {REF} {Length: 3811} {Pfam: Caspase domain [PF00656.24, score=30.2]} {RNA1509_43988} {RNA1310_8586} {RNA815_7730.1}
3. MligTC455_40125 953 19.86 Mlig455_005600, Mlig455_014458

Neo: -

Age: Up-Down-Down

 KIF13B, KIF1B 1.87 - - - 0.952 - 0.918

Mlig455_005600 {REF} {Length: 4684} {Pfam: Kinesin protein 1B [PF12423.10, score=42.5]} {Human: ENSG00000197892, KIF13B, kinesin family member 13B, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=98.2, Expect=4e-21]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [Score=177, Expect=5e-48]} {Smed: dd_Smed_v6_20223_0_1, dd_Smed_v6_20223_0_1, [Score=118, Expect=3e-28]} {RNA1509_6760} {RNA1310_2628} {RNA815_4402}

Mlig455_014458 {REF} {Length: 3819} {Pfam: Kinesin motor domain [PF00225.25, score=336.4]; Microtubule binding [PF16796.7, score=68.9]; Kinesin protein 1B [PF12423.10, score=40.0]; Kinesin-associated [PF16183.7, score=27.3]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=404, Expect=2e-123]; ENSG00000137177, KIF13A, kinesin family member 13A, [Score=404, Expect=9e-120]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=404, Expect=2e-120]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=399, Expect=2e-125]; ENSG00000129250, KIF1C, kinesin family member 1C, [Score=398, Expect=2e-121]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=568, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=415, Expect=5e-124]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=818, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=617, Expect=0.0]} {RNA1509_6760} {RNA1310_1667.1} {RNA815_1144}
4. MligTC455_31805 747 15.56 Mlig455_070318

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.499

 EFCAB6 1.807 - - - 0.966 - 0.841 Mlig455_070318 {REF} {Length: 3714} {Pfam: EF-hand domain pair [PF13499.8, score=82.4]; EF-hand domain [PF08976.13, score=72.0]; EF-hand domain pair [PF13833.8, score=64.0]; EF-hand domain [PF13405.8, score=56.9]; EF hand [PF00036.34, score=53.2]; EF-hand domain [PF14658.8, score=34.9]; Family of unknown function (DUF5580) [PF17743.3, score=27.9]; EF hand [PF13202.8, score=22.4]} {Human: ENSG00000186976, EFCAB6, EF-hand calcium binding domain 6, [Score=86.3, Expect=2e-16]} {Mouse: ENSMUSG00000022441, Efcab6, EF-hand calcium binding domain 6, [Score=76.6, Expect=1e-13]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.9, Expect=2e-06]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=50.8, Expect=4e-07]} {Smed: dd_Smed_v6_20435_0_1, dd_Smed_v6_20435_0_1, [Score=157, Expect=1e-40]} {RNA1509_7148} {RNA1310_3069.1} {RNA815_3758}
5. MligTC455_44409 348 7.26 Mlig455_029682

Neo: -

Age: -

Region-enriched R2: 2.206/0.04419

 TRPM2 1.799 - - - 0.954 - 0.845 Mlig455_029682 {REF} {Length: 2938} {Pfam: Ion transport protein [PF00520.33, score=67.3]} {Human: ENSG00000142185, TRPM2, transient receptor potential cation channel subfamily M member 2, [Score=221, Expect=2e-59]; ENSG00000070985, TRPM5, transient receptor potential cation channel subfamily M member 5, [Score=216, Expect=3e-58]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=214, Expect=2e-57]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=217, Expect=2e-58]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=216, Expect=6e-58]; ENSMUSG00000009246, Trpm5, transient receptor potential cation channel, subfamily M, member 5, [Score=209, Expect=4e-56]; ENSMUSG00000009292, Trpm2, transient receptor potential cation channel, subfamily M, member 2, [Score=207, Expect=5e-55]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=189, Expect=3e-49]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=142, Expect=3e-34]} {Smed: dd_Smed_v6_11259_0_4, dd_Smed_v6_11259_0_4, [Score=197, Expect=2e-52]} {RNA1509_3961} {RNA1310_2331} {RNA815_666}
6. MligTC455_17738 600 12.49 Mlig455_005267

Neo: -

Age: Up-Down-Up

 PKNOX2 1.764 - - 0.810 0.954 - - Mlig455_005267 {REF} {Length: 4191} {Pfam: Homeobox KN domain [PF05920.13, score=68.1]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=55.5]; Homeodomain [PF00046.31, score=30.5]} {Human: ENSG00000165495, PKNOX2, PBX/knotted 1 homeobox 2, [RH, Score=209, Expect=1e-59]} {Mouse: ENSMUSG00000035934, Pknox2, Pbx/knotted 1 homeobox 2, [RH, Score=209, Expect=2e-59]} {Dmel: FBgn0001235, hth, homothorax, [Score=117, Expect=1e-27]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=107, Expect=3e-24]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=258, Expect=2e-75]} {RNA1509_58890} {RNA1310_1426.1} {RNA815_7214}
7. MligTC455_52328 2155 44.89 Mlig455_042831

Neo: -

Age: -

Region-enriched R4: 1.015/0.02742

 1.756 - - - 0.963 - 0.793 Mlig455_042831 {REF} {Length: 850} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=51.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=43.7]} {Mouse: ENSMUSG00000090812, Samd15, sterile alpha motif domain containing 15, [RH, Score=106, Expect=4e-27]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=48.9, Expect=3e-07]} {Smed: dd_Smed_v6_7783_0_1, dd_Smed_v6_7783_0_1, [RH, Score=150, Expect=2e-47]} {RNA1509_12014, RNA1509_40710} {RNA1310_41932, RNA1509_40710} {RNA1509_40710, RNA815_20511}
8. MligTC455_33507 300 6.26 Mlig455_060204

Neo: -

Age: Up-Down-Up

 CEP135 1.75 - - - 0.950 - 0.800 Mlig455_060204 {REF} {Length: 4056} {Human: ENSG00000174799, CEP135, centrosomal protein 135, [Score=112, Expect=2e-25]} {Mouse: ENSMUSG00000036403, Cep135, centrosomal protein 135, [Score=105, Expect=3e-23]} {Smed: dd_Smed_v6_5218_0_1, dd_Smed_v6_5218_0_1, [Score=122, Expect=2e-29]} {RNA1509_4418} {RNA1310_38678} {RNA815_51127}
9. MligTC455_49005 642 13.37 Mlig455_043634

Neo: -

Age: -

 CCDC180 1.737 - - - 0.960 - 0.777 Mlig455_043634 {REF} {Length: 3450} {Pfam: Domain of unknown function (DUF4456) [PF14644.8, score=137.1]} {Human: ENSG00000197816, CCDC180, coiled-coil domain containing 180, [Score=160, Expect=2e-41]} {Mouse: ENSMUSG00000035539, Ccdc180, coiled-coil domain containing 180, [Score=110, Expect=3e-25]} {Smed: dd_Smed_v6_12302_0_1, dd_Smed_v6_12302_0_1, [Score=166, Expect=4e-44]} {RNA1509_8832} {RNA1310_898.2} {RNA815_8511}
10. MligTC455_26432 1498 31.21 Mlig455_070327

Neo: -

Age: Down-Up-Up

 1.731 - - 0.773 0.958 - - Mlig455_070327 {REF} {Length: 1200} {NoTransDecoderORF} {RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1310_49149.2, RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1509_11441, RNA1509_19097, RNA1509_46968, RNA815_25016}
11. MligTC455_09317 1638 34.12 Mlig455_061529

Neo: -

Age: Down-Down-Up

 1.684 - 0.726 - 0.958 - - Mlig455_061529 {REF} {Length: 2922} {RNA1509_44877} {RNA1310_25423.1, RNA1509_44877} {RNA1509_44877, RNA815_162}
12. MligTC455_46739 450 9.38 Mlig455_002971

Neo: -

Age: -

 NMNAT1 1.668 - 0.706 - 0.962 - - Mlig455_002971 {REF} {Length: 3453} {TRANSSPLICED} {Pfam: Cytidylyltransferase-like [PF01467.28, score=29.1]} {Human: ENSG00000173614, NMNAT1, nicotinamide nucleotide adenylyltransferase 1, [Score=140, Expect=5e-38]} {Mouse: ENSMUSG00000028992, Nmnat1, nicotinamide nucleotide adenylyltransferase 1, [Score=137, Expect=6e-37]} {Dmel: FBgn0039254, Nmnat, Nicotinamide mononucleotide adenylyltransferase, [Score=130, Expect=7e-34]} {Celegans: WBGene00012295, nmat-1, Nicotinamide-nucleotide adenylyltransferase, [Score=52.8, Expect=9e-08]} {Smed: dd_Smed_v6_5656_0_1, dd_Smed_v6_5656_0_1, [Score=120, Expect=2e-31]} {RNA1509_56526} {RNA1310_12468} {RNA815_3099}
13. MligTC455_29167 831 17.3 Mlig455_000398

Neo: -

Age: Up-Down-Down

 DNAH5 1.661 - 0.704 - 0.957 - - Mlig455_000398 {REF} {Length: 14585} {Pfam: Dynein heavy chain, N-terminal region 1 [PF08385.14, score=581.1]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=469.7]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=434.4]; Dynein heavy chain C-terminal domain [PF18199.3, score=319.5]; P-loop containing dynein motor region D4 [PF12780.9, score=304.5]; ATP-binding dynein motor region [PF12781.9, score=284.2]; P-loop containing dynein motor region [PF12775.9, score=230.3]; Dynein heavy chain AAA lid domain [PF18198.3, score=176.9]; Microtubule-binding stalk of dynein motor [PF12777.9, score=135.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=120.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=80.3]; Dynein heavy chain AAA lid domain [PF17852.3, score=66.4]; AAA+ lid domain [PF17857.3, score=62.9]; AAA ATPase domain [PF13191.8, score=24.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=23.0]; AAA domain [PF13401.8, score=20.7]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.9]; P-loop containing region of AAA domain [PF13555.8, score=19.7]} {Human: ENSG00000039139, DNAH5, dynein axonemal heavy chain 5, [RH, Score=6261, Expect=0.0]} {Mouse: ENSMUSG00000022262, Dnah5, dynein, axonemal, heavy chain 5, [RH, Score=6235, Expect=0.0]} {Dmel: FBgn0037726, CG9492, [RH, Score=5129, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1287, Expect=0.0]} {Smed: dd_Smed_v6_4569_0_1, dd_Smed_v6_4569_0_1, [RH, Score=6966, Expect=0.0]} {RNA1509_653} {RNA1310_37.1} {RNA815_534.1}
14. MligTC455_44709 1473 30.68 Mlig455_044126

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.323

Region-enriched R2: 1.087/0.01396

 CFAP20 0.984 - - - 0.984 - - Mlig455_044126 {REF} {Length: 1458} {Pfam: Protein of unknown function (DUF667) [PF05018.15, score=306.8]} {Human: ENSG00000070761, CFAP20, cilia and flagella associated protein 20, [RH, Score=360, Expect=1e-128]} {Mouse: ENSMUSG00000031796, Cfap20, cilia and flagella associated protein 20, [RH, Score=363, Expect=9e-130]} {Dmel: FBgn0032248, Bug22, Basal body up regulated gene 22, [RH, Score=355, Expect=1e-126]} {Celegans: WBGene00008288, C54C6.6, Cilia- and flagella-associated protein 20, [RH, Score=333, Expect=4e-118]} {Smed: dd_Smed_v6_4843_0_1, dd_Smed_v6_4843_0_1, [RH, Score=363, Expect=2e-130]} {RNA1509_27107, RNA1509_35008, RNA1509_5810} {RNA1310_18346.2, RNA1509_27107, RNA1509_35008} {RNA1509_27107, RNA1509_35008, RNA815_7118.1}
15. MligTC455_42148 1810 37.71 Mlig455_061808, Mlig455_061848

Neo: Irradiation

Age: logFC(26M/2M)=-0.453

 UGCG 0.982 - - - 0.982 - -

Mlig455_061808 {REF} {Length: 2757} {Pfam: Glycosyl transferase family 21 [PF13506.8, score=138.2]; Glycosyltransferase like family 2 [PF13641.8, score=56.9]; Glycosyl transferase family group 2 [PF13632.8, score=22.5]} {Human: ENSG00000148154, UGCG, UDP-glucose ceramide glucosyltransferase, [Score=296, Expect=6e-97]} {Mouse: ENSMUSG00000028381, Ugcg, UDP-glucose ceramide glucosyltransferase, [Score=291, Expect=3e-95]} {Dmel: FBgn0067102, GlcT-1, Ceramide glucosyltransferase, [RH, Score=333, Expect=7e-111]} {Celegans: WBGene00019127, cgt-3, Ceramide glucosyltransferase 3, [RH, Score=288, Expect=4e-93]} {Smed: dd_Smed_v6_2757_0_1, dd_Smed_v6_2757_0_1, [RH, Score=298, Expect=2e-97]} {RNA1509_7879} {RNA1310_8913} {RNA815_2874}

Mlig455_061848 {REF} {Length: 2911} {Pfam: Glycosyl transferase family 21 [PF13506.8, score=138.2]; Glycosyltransferase like family 2 [PF13641.8, score=56.9]; Glycosyl transferase family group 2 [PF13632.8, score=22.5]} {Human: ENSG00000148154, UGCG, UDP-glucose ceramide glucosyltransferase, [Score=295, Expect=2e-96]} {Mouse: ENSMUSG00000028381, Ugcg, UDP-glucose ceramide glucosyltransferase, [Score=290, Expect=1e-94]} {Dmel: FBgn0067102, GlcT-1, Ceramide glucosyltransferase, [RH, Score=333, Expect=7e-111]} {Celegans: WBGene00019127, cgt-3, Ceramide glucosyltransferase 3, [RH, Score=287, Expect=9e-93]} {Smed: dd_Smed_v6_2757_0_1, dd_Smed_v6_2757_0_1, [RH, Score=298, Expect=3e-97]} {RNA1509_3776, RNA1509_55381} {RNA1310_8913, RNA1509_3776, RNA1509_55381} {RNA1509_3776, RNA1509_55381, RNA815_2874}
16. MligTC455_51745 267 5.56 Mlig455_007920

Neo: -

Age: -

 FOXJ3 0.981 - - - - - 0.981 Mlig455_007920 {REF} {Length: 2476} {Pfam: Forkhead domain [PF00250.20, score=126.3]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=165, Expect=4e-46]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=164, Expect=5e-44]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=118, Expect=8e-29]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=115, Expect=3e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=2e-26]} {RNA1509_19637, RNA1509_37021, RNA1509_41082} {RNA1310_12207, RNA1509_37021, RNA1509_41082} {RNA1509_37021, RNA1509_41082, RNA815_17037}
17. MligTC455_41630 1454 30.29 Mlig455_025455

Neo: Int S/G2/M

Age: Down-Up-Down

 BET1 0.972 - - - 0.972 - - Mlig455_025455 {REF} {Length: 1580} {TRANSSPLICED} {Human: ENSG00000105829, BET1, Bet1 golgi vesicular membrane trafficking protein, [RH, Score=84.7, Expect=6e-22]} {Mouse: ENSMUSG00000032757, Bet1, Bet1 golgi vesicular membrane trafficking protein, [RH, Score=88.2, Expect=2e-23]} {Celegans: WBGene00043064, nbet-1, BET1; Nematode homolog of yeast BET1 (Blocked Early in Transport), [RH, Score=77.0, Expect=2e-19]} {RNA1509_11495, RNA1509_52446} {RNA1310_40803.1, RNA1509_11495, RNA1509_52446} {RNA1509_11495, RNA1509_52446, RNA815_19500}
18. MligTC455_43001 2139 44.57 Mlig455_004256, Mlig455_004325

Neo: -

Age: -

Region-enriched R2: 2.362/0.00019

 GLUD1 0.972 - - - 0.972 - -

Mlig455_004256 {REF} {Length: 1969} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=185.6]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=175.9]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [Score=639, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [Score=639, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [Score=639, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [Score=613, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [Score=558, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [Score=641, Expect=0.0]} {RNA1509_30743} {RNA1310_2661.2} {RNA815_713.2}

Mlig455_004325 {REF} {Length: 2236} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=185.5]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=174.7]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [Score=642, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [Score=640, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [Score=641, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [Score=613, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [Score=558, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [Score=639, Expect=0.0]} {RNA1509_10773, RNA1509_30743} {RNA1310_2661.2, RNA1509_10773, RNA1509_30743} {RNA1509_10773, RNA1509_30743, RNA815_713.2}
19. MligTC455_04273 1905 39.69 Mlig455_014980, Mlig455_027959, Mlig455_027986, Mlig455_042890, Mlig455_056217

Neo: -

Age: logFC(26M/2M)=0.365

Region-enriched R4: 1.233/0.00679

 0.97 - - - - - 0.970

Mlig455_014980 {REF} {Length: 2410} {TRANSSPLICED} {Pfam: Plasmid protein of unknown function (Plasmid_RAQPRD) [PF09686.12, score=24.0]} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1}

Mlig455_027959 {REF} {Length: 3263} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382}

Mlig455_027986 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382}

Mlig455_042890 {REF} {Length: 2273} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1}

Mlig455_056217 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382}
20. MligTC455_44864 453 9.44 Mlig455_027405

Neo: -

Age: -

 MTUS2 0.97 - - - - - 0.970 Mlig455_027405 {REF} {Length: 8444} {TRANSSPLICED} {Human: ENSG00000132938, MTUS2, microtubule associated scaffold protein 2, [Score=58.9, Expect=4e-08]} {Mouse: ENSMUSG00000029651, Mtus2, microtubule associated tumor suppressor candidate 2, [Score=55.8, Expect=2e-07]} {RNA1509_16237, RNA1509_25613, RNA1509_46083, RNA1509_49376, RNA1509_51116} {RNA1310_3116, RNA1509_16237, RNA1509_25613, RNA1509_46083, RNA1509_49376, RNA1509_51116} {RNA1509_16237, RNA1509_25613, RNA1509_46083, RNA1509_49376, RNA1509_51116, RNA815_3763.1}
21. MligTC455_49004 1711 35.64 Mlig455_040452, Mlig455_042848, Mlig455_043610

Neo: -

Age: logFC(26M/2M)=-0.274

Region-enriched R2: 1.355/0.00285

 CCDC180 0.97 - - - 0.970 - -

Mlig455_040452 {REF} {Length: 5565} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4455) [PF14643.8, score=418.0]; Domain of unknown function (DUF4456) [PF14644.8, score=172.8]} {Human: ENSG00000197816, CCDC180, coiled-coil domain containing 180, [Score=410, Expect=3e-117]} {Mouse: ENSMUSG00000035539, Ccdc180, coiled-coil domain containing 180, [RH, Score=275, Expect=3e-74]} {Smed: dd_Smed_v6_12302_0_1, dd_Smed_v6_12302_0_1, [Score=399, Expect=4e-116]} {RNA1509_8832} {RNA1310_898.2} {RNA815_672.1}

Mlig455_042848 {REF} {Length: 5466} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4455) [PF14643.8, score=419.7]} {Human: ENSG00000197816, CCDC180, coiled-coil domain containing 180, [Score=274, Expect=1e-74]} {Mouse: ENSMUSG00000035539, Ccdc180, coiled-coil domain containing 180, [RH, Score=275, Expect=4e-75]} {Smed: dd_Smed_v6_12302_0_1, dd_Smed_v6_12302_0_1, [Score=254, Expect=7e-69]} {RNA1509_8832} {RNA1310_898.1} {RNA815_672.1}

Mlig455_043610 {REF} {Length: 5567} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4455) [PF14643.8, score=413.1]; Domain of unknown function (DUF4456) [PF14644.8, score=171.2]} {Human: ENSG00000197816, CCDC180, coiled-coil domain containing 180, [RH, Score=405, Expect=1e-115]} {Mouse: ENSMUSG00000035539, Ccdc180, coiled-coil domain containing 180, [RH, Score=270, Expect=7e-73]} {Smed: dd_Smed_v6_12302_0_1, dd_Smed_v6_12302_0_1, [RH, Score=398, Expect=1e-115]} {RNA1509_8832} {RNA1310_898.2} {RNA815_672.1}
22. MligTC455_54213 234 4.87 Mlig455_063513

Neo: -

Age: Up-Up-Down

 0.965 - - - - - 0.965 Mlig455_063513 {REF} {Length: 3523} {TRANSSPLICED} {RNA1509_50863, RNA1509_57676} {RNA1310_29489, RNA1509_50863, RNA1509_57676} {RNA1509_50863, RNA1509_57676, RNA815_22674}
23. MligTC455_29782 179 3.72 Mlig455_061628

Neo: -

Age: Down-Down-Up

 PXDN 0.964 - - - - - 0.964 Mlig455_061628 {REF} {Length: 4688} {Pfam: Leucine rich repeat [PF13855.8, score=86.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.4]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=31.9]} {Human: ENSG00000130508, PXDN, peroxidasin, [Score=64.7, Expect=1e-09]} {Mouse: ENSMUSG00000020674, Pxdn, peroxidasin, [Score=62.0, Expect=6e-09]} {Dmel: FBgn0035575, CG7509, [Score=60.5, Expect=8e-09]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=82.8, Expect=1e-15]} {RNA1509_13450} {RNA1310_1452.3} {RNA815_668}
24. MligTC455_44592 1049 21.86 Mlig455_057747

Neo: -

Age: -

 0.964 - - - 0.964 - - Mlig455_057747 {REF} {Length: 4064} {RNA1509_59863} {RNA1310_10688} {RNA815_511.1}
25. MligTC455_48061 590 12.29 Mlig455_000203

Neo: -

Age: Down-Down-Up

 0.964 - - - - - 0.964 Mlig455_000203 {REF} {Length: 963} {RNA1509_42285, RNA1509_52921} {RNA1310_38575, RNA1509_52921}
26. MligTC455_32724 1777 37.02 Mlig455_033032, Mlig455_044088

Neo: -

Age: logFC(26M/2M)=-0.179

 L3MBTL3 0.962 - - - 0.962 - -

Mlig455_033032 {REF} {Length: 6934} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=224.5]; Zinc finger, C2HC type [PF01530.20, score=38.7]} {Human: ENSG00000198945, L3MBTL3, L3MBTL3, histone methyl-lysine binding protein, [Score=376, Expect=8e-112]} {Mouse: ENSMUSG00000039089, L3mbtl3, L3MBTL3 histone methyl-lysine binding protein, [RH, Score=328, Expect=1e-94]} {Dmel: FBgn0002441, l(3)mbt, lethal (3) malignant brain tumor, [RH, Score=273, Expect=1e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=92.4, Expect=1e-18]} {Smed: dd_Smed_v6_11547_0_1, dd_Smed_v6_11547_0_1, [RH, Score=296, Expect=2e-84]} {RNA1509_44965, RNA1509_53530} {RNA1310_2333.1, RNA1509_44965} {RNA1509_44965, RNA815_3225}

Mlig455_044088 {REF} {Length: 6921} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=224.5]; Zinc finger, C2HC type [PF01530.20, score=38.8]} {Human: ENSG00000198945, L3MBTL3, L3MBTL3, histone methyl-lysine binding protein, [Score=375, Expect=2e-111]} {Mouse: ENSMUSG00000039089, L3mbtl3, L3MBTL3 histone methyl-lysine binding protein, [RH, Score=328, Expect=2e-94]} {Dmel: FBgn0002441, l(3)mbt, lethal (3) malignant brain tumor, [RH, Score=272, Expect=2e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=92.4, Expect=1e-18]} {Smed: dd_Smed_v6_11547_0_1, dd_Smed_v6_11547_0_1, [RH, Score=297, Expect=2e-84]} {RNA1509_53530} {RNA1310_2333.1} {RNA815_3225}
27. MligTC455_42623 524 10.91 Mlig455_058028

Neo: -

Age: -

 GAS2L1 0.962 - - - - - 0.962 Mlig455_058028 {REF} {Length: 2577} {Pfam: Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=105.5]; Calponin homology (CH) domain [PF00307.33, score=29.6]} {Human: ENSG00000185340, GAS2L1, growth arrest specific 2 like 1, [RH, Score=222, Expect=4e-64]} {Mouse: ENSMUSG00000034201, Gas2l1, growth arrest-specific 2 like 1, [RH, Score=257, Expect=1e-77]} {Dmel: FBgn0029881, pigs, pickled eggs, [Score=245, Expect=4e-71]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=75.5, Expect=5e-14]} {Smed: dd_Smed_v6_8154_0_1, dd_Smed_v6_8154_0_1, [RH, Score=271, Expect=6e-85]} {RNA1509_28378} {RNA1310_8988.1, RNA1509_28378} {RNA1509_28378, RNA815_19449}
28. MligTC455_48607 160 3.34 Mlig455_069298

Neo: -

Age: Up-Down-Up

Region-enriched R2: 2.694/0.01204

 ENSA 0.962 - - - - - 0.962 Mlig455_069298 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: cAMP-regulated phosphoprotein/endosulfine conserved region [PF04667.19, score=33.5]} {Human: ENSG00000143420, ENSA, endosulfine alpha, [RH, Score=79.7, Expect=2e-19]; ENSG00000128989, ARPP19, cAMP regulated phosphoprotein 19, [RH, Score=79.3, Expect=3e-19]} {Mouse: ENSMUSG00000038619, Ensa, endosulfine alpha, [RH, Score=80.9, Expect=4e-20]} {Dmel: FBgn0061515, endos, endosulfine, [RH, Score=67.8, Expect=4e-15]} {Smed: dd_Smed_v6_4126_0_2, dd_Smed_v6_4126_0_2, [Score=82.8, Expect=4e-21]} {RNA1509_39694, RNA1509_40436} {RNA1310_16598, RNA1509_40436} {RNA1509_40436, RNA815_33532}
29. MligTC455_19602 1304 27.17 Mlig455_001419

Neo: -

Age: logFC(26M/2M)=-0.387

 0.958 - - - 0.958 - - Mlig455_001419 {REF} {Length: 2919} {RNA1509_31922, RNA1509_3389} {RNA1310_10529.1, RNA1509_31922, RNA1509_3389} {RNA1509_31922, RNA1509_3389, RNA815_4554}
30. MligTC455_53502 2219 46.22 Mlig455_044502

Neo: -

Age: -

Region-enriched R4: 1.100/0.01013

 IFT22 0.958 - - - 0.958 - - Mlig455_044502 {REF} {Length: 926} {Pfam: Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=42.7]; Ras family [PF00071.24, score=36.8]; ADP-ribosylation factor family [PF00025.23, score=35.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=20.4]} {Human: ENSG00000128581, IFT22, intraflagellar transport 22, [RH, Score=148, Expect=5e-45]} {Mouse: ENSMUSG00000007987, Ift22, intraflagellar transport 22, [RH, Score=139, Expect=8e-42]} {Celegans: WBGene00012132, ifta-2, Intraflagellar transport associated protein 2, [RH, Score=95.9, Expect=2e-24]} {Smed: dd_Smed_v6_11176_0_1, dd_Smed_v6_11176_0_1, [RH, Score=213, Expect=5e-71]} {RNA1509_10351, RNA1509_35028, RNA1509_53245} {RNA1310_41419, RNA1509_10351, RNA1509_35028, RNA1509_53245} {RNA1509_10351, RNA1509_35028, RNA1509_53245, RNA815_20100}
31. MligTC455_14007 86 1.79 Mlig455_025913

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_025913 {REF} {Length: 1361} {RNA1509_45083} {RNA1310_6827.1} {RNA815_12324}
32. MligTC455_45656 349 7.26 Mlig455_001556

Neo: -

Age: -

 FBXO25 0.954 - - - - - 0.954 Mlig455_001556 {REF} {Length: 3220} {TRANSSPLICED} {Human: ENSG00000147364, FBXO25, F-box protein 25, [RH, Score=106, Expect=5e-25]; ENSG00000156804, FBXO32, F-box protein 32, [RH, Score=103, Expect=3e-24]} {Mouse: ENSMUSG00000038365, Fbxo25, F-box protein 25, [RH, Score=109, Expect=2e-26]} {Dmel: FBgn0036196, CG11658, [RH, Score=124, Expect=5e-32]} {Celegans: WBGene00008439, mfb-1, MAFBx (F-box) protein homolog, [RH, Score=118, Expect=1e-29]} {Smed: dd_Smed_v6_11888_0_1, dd_Smed_v6_11888_0_1, [RH, Score=200, Expect=7e-61]} {RNA1509_30284} {RNA1310_25700, RNA1509_30284} {RNA1509_30284, RNA815_623.1}
33. MligTC455_50530 2119 44.14 Mlig455_030950, Mlig455_034364

Neo: -

Age: -

 0.954 - - - 0.954 - -

Mlig455_030950 {REF} {Length: 7693} {TRANSSPLICED} {RNA1509_37969} {RNA1310_1070} {RNA815_2258.1}

Mlig455_034364 {REF} {Length: 7847} {TRANSSPLICED} {RNA1509_26045, RNA1509_28270, RNA1509_37812} {RNA1310_952, RNA1509_26045, RNA1509_37812} {RNA1509_26045, RNA1509_37812, RNA815_2258.1}
34. MligTC455_26386 624 13 Mlig455_020042

Neo: -

Age: logFC(26M/2M)=0.231

Region-enriched R5: 1.382/0.00337

 0.953 - - - 0.953 - - Mlig455_020042 {REF} {Length: 4207} {TRANSSPLICED} {Smed: dd_Smed_v6_3465_0_1, dd_Smed_v6_3465_0_1, [RH, Score=112, Expect=6e-26]} {RNA1509_13462, RNA1509_58720} {RNA1310_9257, RNA1509_13462, RNA1509_58720} {RNA1509_13462, RNA1509_58720, RNA815_5213}
35. MligTC455_44591 1042 21.7 Mlig455_013859

Neo: -

Age: -

 AKNA 0.953 - - - 0.953 - - Mlig455_013859 {REF} {Length: 5923} {TRANSSPLICED} {Human: ENSG00000106948, AKNA, AT-hook transcription factor, [RH, Score=52.4, Expect=7e-06]} {Mouse: ENSMUSG00000039158, Akna, AT-hook transcription factor, [Score=53.9, Expect=2e-06]} {Smed: dd_Smed_v6_5190_0_1, dd_Smed_v6_5190_0_1, [Score=49.7, Expect=1e-05]} {RNA1509_4010} {RNA1310_713} {RNA815_511.1}
36. MligTC455_51601 185 3.85 Mlig455_025475

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_025475 {REF} {Length: 3495} {TRANSSPLICED} {RNA1509_42536} {RNA1310_9013} {RNA815_28709}
37. MligTC455_48606 181 3.78 Mlig455_057120

Neo: -

Age: -

Region-enriched R2: 2.436/0.01920

 ENSA 0.951 - - - - - 0.951 Mlig455_057120 {REF} {Length: 3083} {TRANSSPLICED} {Pfam: cAMP-regulated phosphoprotein/endosulfine conserved region [PF04667.19, score=33.5]} {Human: ENSG00000143420, ENSA, endosulfine alpha, [RH, Score=79.7, Expect=2e-19]; ENSG00000128989, ARPP19, cAMP regulated phosphoprotein 19, [RH, Score=79.3, Expect=3e-19]} {Mouse: ENSMUSG00000038619, Ensa, endosulfine alpha, [RH, Score=80.9, Expect=4e-20]} {Dmel: FBgn0061515, endos, endosulfine, [RH, Score=67.8, Expect=4e-15]} {Smed: dd_Smed_v6_4126_0_2, dd_Smed_v6_4126_0_2, [Score=82.8, Expect=4e-21]} {RNA1509_39694} {RNA1310_16598, RNA1509_39694} {RNA1509_39694, RNA815_33532}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA