Data search
Results for MligTC455_41630
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41630 | 1454 | 30.29 | Mlig455_025455 | Neo: Int S/G2/M Age: Down-Up-Down |
BET1 | Mlig455_025455 {REF} {Length: 1580} {TRANSSPLICED} {Human: ENSG00000105829, BET1, Bet1 golgi vesicular membrane trafficking protein, [RH, Score=84.7, Expect=6e-22]} {Mouse: ENSMUSG00000032757, Bet1, Bet1 golgi vesicular membrane trafficking protein, [RH, Score=88.2, Expect=2e-23]} {Celegans: WBGene00043064, nbet-1, BET1; Nematode homolog of yeast BET1 (Blocked Early in Transport), [RH, Score=77.0, Expect=2e-19]} {RNA1509_11495, RNA1509_52446} {RNA1310_40803.1, RNA1509_11495, RNA1509_52446} {RNA1509_11495, RNA1509_52446, RNA815_19500} |
Cumulative graph for MligTC455_41630
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.486 | 5.022 | 0.45218 | 1.00000 | |
| RegionR2 | -0.141 | 5.022 | 0.67066 | 0.99853 | |
| RegionR3 | -0.176 | 5.022 | 0.51594 | 1.00000 | |
| RegionR4 | -0.485 | 5.022 | 0.12019 | 0.34753 | |
| RegionR5 | 0.444 | 5.022 | 0.06520 | 0.22650 | |
| RegionR6 | 0.273 | 5.022 | 0.30650 | 0.89781 | |
| RegionR7 | 0.406 | 5.022 | 0.18716 | 0.78917 | |
| RegionR8 | 0.165 | 5.022 | 0.66977 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.28 | 5.022 | 0.76770 | 1.00000 | |
| RegenerationR2 | 0.055 | 5.022 | 0.85512 | 1.00000 | |
| RegenerationR3 | -0.073 | 5.022 | 0.82448 | 0.98924 | |
| RegenerationR4 | -0.042 | 5.022 | 0.89759 | 1.00000 | |
| RegenerationR5 | -0.35 | 5.022 | 0.24098 | 0.67469 | |
| RegenerationR6 | -0.666 | 5.022 | 0.04489 | 0.26479 | |
| RegenerationBL | -1.103 | 5.022 | 0.00581 | 0.07248 | |
| RegenerationTP | -0.417 | 5.022 | 0.27799 | 0.72577 |
Genes with expression patterns similar to MligTC455_41630
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41630 | 1454 | 30.29 | Mlig455_025455 | Neo: Int S/G2/M Age: Down-Up-Down |
BET1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_025455 {REF} {Length: 1580} {TRANSSPLICED} {Human: ENSG00000105829, BET1, Bet1 golgi vesicular membrane trafficking protein, [RH, Score=84.7, Expect=6e-22]} {Mouse: ENSMUSG00000032757, Bet1, Bet1 golgi vesicular membrane trafficking protein, [RH, Score=88.2, Expect=2e-23]} {Celegans: WBGene00043064, nbet-1, BET1; Nematode homolog of yeast BET1 (Blocked Early in Transport), [RH, Score=77.0, Expect=2e-19]} {RNA1509_11495, RNA1509_52446} {RNA1310_40803.1, RNA1509_11495, RNA1509_52446} {RNA1509_11495, RNA1509_52446, RNA815_19500} |
| 2. | MligTC455_49234 | 529 | 11.02 | Mlig455_022147 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.228/0.00988 |
DOCK7 | 1.826 | - | - | - | 0.976 | - | 0.850 | Mlig455_022147 {REF} {Length: 9628} {TRANSSPLICED} {Pfam: Dock homology region 2 [PF06920.15, score=602.4]; C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=135.7]} {Human: ENSG00000116641, DOCK7, dedicator of cytokinesis 7, [RH, Score=721, Expect=0.0]; ENSG00000130158, DOCK6, dedicator of cytokinesis 6, [RH, Score=696, Expect=0.0]} {Mouse: ENSMUSG00000028556, Dock7, dedicator of cytokinesis 7, [RH, Score=722, Expect=0.0]} {Dmel: FBgn0031216, Zir, Zizimin-related, [RH, Score=687, Expect=0.0]} {Celegans: WBGene00018520, F46H5.4, [RH, Score=418, Expect=3e-119]} {Smed: dd_Smed_v6_11826_0_1, dd_Smed_v6_11826_0_1, [RH, Score=600, Expect=0.0]} {RNA1509_5744} {RNA1310_435, RNA1509_5744} {RNA1509_5744, RNA815_1936} |
| 3. | MligTC455_50152 | 714 | 14.88 | Mlig455_061604 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.803/0.00026 |
MPC2 | 1.766 | - | - | - | 0.955 | - | 0.811 | Mlig455_061604 {REF} {Length: 1611} {TRANSSPLICED} {Pfam: Mitochondrial pyruvate carriers [PF03650.15, score=143.4]} {Human: ENSG00000143158, MPC2, mitochondrial pyruvate carrier 2, [RH, Score=145, Expect=1e-45]} {Mouse: ENSMUSG00000026568, Mpc2, mitochondrial pyruvate carrier 2, [RH, Score=130, Expect=4e-40]} {Dmel: FBgn0037715, CG9399, [RH, Score=151, Expect=6e-48]} {Celegans: WBGene00018765, mpc-2, Probable mitochondrial pyruvate carrier 2, [RH, Score=137, Expect=6e-43]} {Smed: dd_Smed_v6_6084_0_1, dd_Smed_v6_6084_0_1, [RH, Score=179, Expect=7e-60]} {RNA1509_19569, RNA1509_38340, RNA1509_9799} {RNA1310_57693.1, RNA1509_38340, RNA1509_9799} {RNA1509_38340, RNA1509_9799, RNA815_30843} |
| 4. | MligTC455_26386 | 624 | 13 | Mlig455_020042 | Neo: - Age: logFC(26M/2M)=0.231 Region-enriched R5: 1.382/0.00337 |
1.677 | - | - | - | 0.953 | - | 0.724 | Mlig455_020042 {REF} {Length: 4207} {TRANSSPLICED} {Smed: dd_Smed_v6_3465_0_1, dd_Smed_v6_3465_0_1, [RH, Score=112, Expect=6e-26]} {RNA1509_13462, RNA1509_58720} {RNA1310_9257, RNA1509_13462, RNA1509_58720} {RNA1509_13462, RNA1509_58720, RNA815_5213} | |
| 5. | MligTC455_34345 | 1255 | 26.14 | Mlig455_028400, Mlig455_028413, Mlig455_028435 | Neo: - Age: - |
GRTP1 | 0.972 | - | - | - | 0.972 | - | - | Mlig455_028400 {REF} {Length: 2381} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_35493} {RNA1310_12040.1} {RNA815_7041} Mlig455_028413 {REF} {Length: 2486} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_35493} {RNA1310_12040.1} {RNA815_7041} Mlig455_028435 {REF} {Length: 2379} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=188.6]} {Human: ENSG00000139835, GRTP1, growth hormone regulated TBC protein 1, [RH, Score=289, Expect=7e-96]} {Mouse: ENSMUSG00000038515, Grtp1, GH regulated TBC protein 1, [RH, Score=288, Expect=1e-95]} {Dmel: FBgn0038401, CG5916, [RH, Score=259, Expect=2e-84]} {Celegans: WBGene00015410, tbc-6, Growth hormone-regulated TBC protein 6, [RH, Score=175, Expect=8e-52]} {Smed: dd_Smed_v6_8496_0_1, dd_Smed_v6_8496_0_1, [RH, Score=280, Expect=6e-93]} {RNA1509_23874, RNA1509_35493, RNA1509_59604} {RNA1310_12040.1, RNA1509_23874, RNA1509_59604} {RNA1509_23874, RNA1509_59604, RNA815_7041} |
| 6. | MligTC455_50530 | 2119 | 44.14 | Mlig455_030950, Mlig455_034364 | Neo: - Age: - |
0.972 | - | - | - | 0.972 | - | - | Mlig455_030950 {REF} {Length: 7693} {TRANSSPLICED} {RNA1509_37969} {RNA1310_1070} {RNA815_2258.1} Mlig455_034364 {REF} {Length: 7847} {TRANSSPLICED} {RNA1509_26045, RNA1509_28270, RNA1509_37812} {RNA1310_952, RNA1509_26045, RNA1509_37812} {RNA1509_26045, RNA1509_37812, RNA815_2258.1} |
|
| 7. | MligTC455_25209 | 1330 | 27.71 | Mlig455_009343 | Neo: - Age: - |
PUM2 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_009343 {REF} {Length: 4794} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=283.5]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=541, Expect=7e-177]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=531, Expect=6e-172]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=540, Expect=5e-176]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=532, Expect=1e-171]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=532, Expect=1e-171]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=516, Expect=1e-162]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=396, Expect=1e-125]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [RH, Score=522, Expect=4e-171]} {RNA1509_45011, RNA1509_51688, RNA1509_57720} {RNA1310_4745.1, RNA1509_45011, RNA1509_57720} {RNA1509_45011, RNA1509_57720, RNA815_8885} |
| 8. | MligTC455_26432 | 1498 | 31.21 | Mlig455_070327 | Neo: - Age: Down-Up-Up |
0.961 | - | - | - | 0.961 | - | - | Mlig455_070327 {REF} {Length: 1200} {NoTransDecoderORF} {RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1310_49149.2, RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1509_11441, RNA1509_19097, RNA1509_46968, RNA815_25016} | |
| 9. | MligTC455_06132 | 279 | 5.81 | Mlig455_060518 | Neo: - Age: Down-Up-Up |
C7orf25 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_060518 {REF} {Length: 3981} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1308) [PF07000.13, score=150.0]} {Human: ENSG00000136197, C7orf25, chromosome 7 open reading frame 25, [RH, Score=147, Expect=9e-39]} {Mouse: ENSMUSG00000039182, AW209491, expressed sequence AW209491, [RH, Score=153, Expect=3e-41]} {Dmel: FBgn0260755, CG42553, [RH, Score=129, Expect=4e-33]} {Celegans: WBGene00018015, F33G12.3, [RH, Score=82.4, Expect=8e-17]} {RNA1509_47247} {RNA1310_17270.1, RNA1509_47247} {RNA1509_47247, RNA815_20551} |
| 10. | MligTC455_35007 | 995 | 20.72 | Mlig455_067944 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_067944 {REF} {Length: 5148} {TRANSSPLICED} {Pfam: PIH1 CS-like domain [PF18201.3, score=24.2]} {Smed: dd_Smed_v6_9306_0_1, dd_Smed_v6_9306_0_1, [RH, Score=51.6, Expect=3e-07]} {RNA1509_25123} {RNA1310_13149.1, RNA1509_25123} {RNA1509_25123, RNA815_11266} | |
| 11. | MligTC455_44709 | 1473 | 30.68 | Mlig455_044126 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.323 Region-enriched R2: 1.087/0.01396 |
CFAP20 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_044126 {REF} {Length: 1458} {Pfam: Protein of unknown function (DUF667) [PF05018.15, score=306.8]} {Human: ENSG00000070761, CFAP20, cilia and flagella associated protein 20, [RH, Score=360, Expect=1e-128]} {Mouse: ENSMUSG00000031796, Cfap20, cilia and flagella associated protein 20, [RH, Score=363, Expect=9e-130]} {Dmel: FBgn0032248, Bug22, Basal body up regulated gene 22, [RH, Score=355, Expect=1e-126]} {Celegans: WBGene00008288, C54C6.6, Cilia- and flagella-associated protein 20, [RH, Score=333, Expect=4e-118]} {Smed: dd_Smed_v6_4843_0_1, dd_Smed_v6_4843_0_1, [RH, Score=363, Expect=2e-130]} {RNA1509_27107, RNA1509_35008, RNA1509_5810} {RNA1310_18346.2, RNA1509_27107, RNA1509_35008} {RNA1509_27107, RNA1509_35008, RNA815_7118.1} |
| 12. | MligTC455_50529 | 987 | 20.57 | Mlig455_017364 | Neo: - Age: Up-Up-Down |
0.953 | - | - | - | 0.953 | - | - | Mlig455_017364 {REF} {Length: 724} {NoTransDecoderORF} {RNA1509_11669} {RNA1310_22552} {RNA815_27885} | |
| 13. | MligTC455_34284 | 104 | 2.17 | Mlig455_057008 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_057008 {REF} {Length: 393} {NoTransDecoderORF} {RNA1509_53951} {RNA1310_28067} {RNA815_52788} | |
| 14. | MligTC455_25054 | 816 | 17 | Mlig455_041212 | Neo: - Age: - |
RNF31 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_041212 {REF} {Length: 4492} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=92.1]; HOIP UBA domain pair [PF16678.7, score=29.4]; IBR domain, a half RING-finger domain [PF01485.23, score=27.0]; Zn-finger in Ran binding protein and others [PF00641.20, score=22.5]} {Human: ENSG00000285152, RNF31, ring finger protein 31, [RH, Score=293, Expect=3e-82]; ENSG00000092098, RNF31, ring finger protein 31, [RH, Score=293, Expect=3e-82]; ENSG00000284845, AL136295.10, novel transcript, [RH, Score=283, Expect=2e-83]; ENSG00000259529, AL136295.5, novel transcript, [RH, Score=283, Expect=2e-83]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [RH, Score=304, Expect=2e-86]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=239, Expect=1e-63]} {Smed: dd_Smed_v6_4025_0_1, dd_Smed_v6_4025_0_1, [Score=164, Expect=1e-41]} {RNA1509_12103, RNA1509_25952, RNA1509_47287, RNA1509_48904, RNA1509_50036, RNA1509_8581} {RNA1310_2439, RNA1509_25952, RNA1509_47287, RNA1509_48904, RNA1509_50036, RNA1509_8581} {RNA1509_25952, RNA1509_47287, RNA1509_48904, RNA1509_50036, RNA1509_8581, RNA815_897.1} |
Berezikov Lab - 2020-2021 © ERIBA