Data search
Results for MligTC455_34353
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34353 | 1653 | 34.44 | Mlig455_048508 | Neo: Int S/G2/M Age: Down-Up-Down Regeneration-upregulated BL: 1.481 Regeneration-enriched BL: 1.481 |
Mlig455_048508 {REF} {Length: 442} {NoTransDecoderORF} {RNA1509_11449} {RNA1310_21979} {RNA815_9012} |
Cumulative graph for MligTC455_34353
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.353 | 5.316 | 0.62527 | 1.00000 | |
| RegionR2 | -0.063 | 5.316 | 0.84754 | 1.00000 | |
| RegionR3 | -0.175 | 5.316 | 0.50008 | 0.99478 | |
| RegionR4 | 0.724 | 5.316 | 0.01231 | 0.07127 | |
| RegionR5 | 0.509 | 5.316 | 0.02373 | 0.10956 | |
| RegionR6 | -0.023 | 5.316 | 0.92947 | 1.00000 | |
| RegionR7 | 0.23 | 5.316 | 0.47097 | 1.00000 | |
| RegionR8 | -0.847 | 5.316 | 0.06769 | 0.50104 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.275 | 5.316 | 0.78845 | 1.00000 | |
| RegenerationR2 | -0.42 | 5.316 | 0.14296 | 0.57400 | |
| RegenerationR3 | 0.314 | 5.316 | 0.30235 | 0.73357 | |
| RegenerationR4 | -0.138 | 5.316 | 0.62961 | 0.92317 | |
| RegenerationR5 | -0.228 | 5.316 | 0.40400 | 0.80137 | |
| RegenerationR6 | 0.666 | 5.316 | 0.02535 | 0.19870 | |
| RegenerationBL | 1.481 | 5.316 | 0.00000 | 0.00038 | Specific for BL: 1.481 |
| RegenerationTP | -0.172 | 5.316 | 0.68947 | 1.00000 |
Genes with expression patterns similar to MligTC455_34353
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34353 | 1653 | 34.44 | Mlig455_048508 | Neo: Int S/G2/M Age: Down-Up-Down Regeneration-upregulated BL: 1.481 Regeneration-enriched BL: 1.481 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048508 {REF} {Length: 442} {NoTransDecoderORF} {RNA1509_11449} {RNA1310_21979} {RNA815_9012} | |
| 2. | MligTC455_25524 | 7933 | 165.26 | Mlig455_032179 | Neo: - Age: logFC(26M/2M)=-0.281 Region-enriched R4: 1.131/0.00000 Regeneration-upregulated BL: 1.521 Regeneration-enriched BL: 1.521 |
ATP5F1B | 2.641 | - | 0.824 | - | - | 0.850 | 0.967 | Mlig455_032179 {REF} {Length: 2075} {TRANSSPLICED} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=207.4]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.25, score=79.7]} {Human: ENSG00000110955, ATP5F1B, ATP synthase F1 subunit beta, [RH, Score=858, Expect=0.0]} {Mouse: ENSMUSG00000025393, Atp5b, ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0010217, ATPsynbeta, ATP synthase, beta subunit, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00000229, atp-2, ATP synthase subunit beta, mitochondrial, [RH, Score=857, Expect=0.0]} {Smed: dd_Smed_v6_745_0_1, dd_Smed_v6_745_0_1, [RH, Score=882, Expect=0.0]} {RNA1509_13964, RNA1509_1480, RNA1509_19272} {RNA1310_12874.1, RNA1509_13964, RNA1509_19272} {RNA1509_13964, RNA1509_19272, RNA815_4496.1} |
| 3. | MligTC455_44044 | 393 | 8.19 | Mlig455_068889 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 2.803 Regeneration-enriched BL: 2.803 |
SNRPA | 1.813 | - | - | - | 0.952 | - | 0.861 | Mlig455_068889 {REF} {Length: 1007} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=85.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=27.1]; Protein of unknown function (DUF4523) [PF15023.8, score=25.7]; Occluded RNA-recognition motif [PF16842.7, score=20.6]} {Human: ENSG00000077312, SNRPA, small nuclear ribonucleoprotein polypeptide A, [RH, Score=239, Expect=7e-79]} {Mouse: ENSMUSG00000061479, Snrpa, small nuclear ribonucleoprotein polypeptide A, [RH, Score=237, Expect=4e-78]} {Dmel: FBgn0003449, snf, sans fille, [RH, Score=221, Expect=7e-73]} {Celegans: WBGene00004385, rnp-2, RNP (RRM RNA binding domain) containing, [RH, Score=197, Expect=1e-63]} {Smed: dd_Smed_v6_2274_0_1, dd_Smed_v6_2274_0_1, [RH, Score=253, Expect=1e-85]} {RNA1509_35516, RNA1509_38471, RNA1509_5409} {RNA1310_9619, RNA1509_35516, RNA1509_38471, RNA1509_5409} {RNA1509_35516, RNA1509_38471, RNA1509_5409, RNA815_13424} |
| 4. | MligTC455_33868 | 554 | 11.55 | Mlig455_005238 | Neo: - Age: - |
MED13 | 1.801 | - | - | - | 0.961 | - | 0.840 | Mlig455_005238 {REF} {Length: 7105} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=203, Expect=9e-52]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887, RNA1509_5621} {RNA1509_5621, RNA815_2444} |
| 5. | MligTC455_32459 | 510 | 10.62 | Mlig455_012973 | Neo: - Age: - |
1.754 | - | - | - | 0.951 | - | 0.803 | Mlig455_012973 {REF} {Length: 2586} {RNA1310_38015.1} {RNA815_33513} | |
| 6. | MligTC455_42476 | 324 | 6.76 | Mlig455_014602 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.253 Region-enriched R5: 1.915/0.00284 |
OPA3 | 1.748 | - | 0.757 | - | 0.991 | - | - | Mlig455_014602 {REF} {Length: 925} {Pfam: Optic atrophy 3 protein (OPA3) [PF07047.14, score=121.1]} {Human: ENSG00000125741, OPA3, OPA3, outer mitochondrial membrane lipid metabolism regulator, [RH, Score=124, Expect=5e-36]} {Mouse: ENSMUSG00000052214, Opa3, optic atrophy 3, [RH, Score=126, Expect=8e-37]} {Dmel: FBgn0039126, CG13601, [Score=120, Expect=5e-34]} {Smed: dd_Smed_v6_2252_0_1, dd_Smed_v6_2252_0_1, [Score=121, Expect=4e-36]} {RNA1509_21399} {RNA1310_62363} {RNA815_27391.2} |
| 7. | MligTC455_41668 | 1033 | 21.52 | Mlig455_000422, Mlig455_000486, Mlig455_000522, Mlig455_024860 | Neo: Int S/G2/M Age: - Region-specific R4: 2.910 Region-enriched R2: 2.421/0.01491 Regeneration-upregulated BL: 2.234 Regeneration-enriched BL: 2.234 |
DTL | 1.694 | - | - | - | 0.744 | - | 0.950 | Mlig455_000422 {REF} {Length: 2383} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=54.5]} {Human: ENSG00000143476, DTL, denticleless E3 ubiquitin protein ligase homolog, [Score=110, Expect=2e-24]} {Mouse: ENSMUSG00000037474, Dtl, denticleless E3 ubiquitin protein ligase, [Score=90.1, Expect=3e-18]} {Dmel: FBgn0013548, l(2)dtl, lethal-(2)-denticleless, [Score=66.6, Expect=5e-11]} {Smed: dd_Smed_v6_15465_0_1, dd_Smed_v6_15465_0_1, [Score=141, Expect=1e-35]} {RNA1509_28840} {RNA1310_10179, RNA1509_28840} {RNA1509_28840, RNA815_57140} Mlig455_000486 {REF} {Length: 2306} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=44.9]} {Human: ENSG00000143476, DTL, denticleless E3 ubiquitin protein ligase homolog, [Score=172, Expect=5e-45]} {Mouse: ENSMUSG00000037474, Dtl, denticleless E3 ubiquitin protein ligase, [RH, Score=169, Expect=3e-44]} {Dmel: FBgn0013548, l(2)dtl, lethal-(2)-denticleless, [Score=145, Expect=5e-36]} {Celegans: WBGene00011318, cdt-2, CDT (S. pombe CDC10 Dependent Transcript) homolog, [Score=92.0, Expect=3e-19]} {Smed: dd_Smed_v6_15465_0_1, dd_Smed_v6_15465_0_1, [Score=167, Expect=8e-45]} {RNA1509_28840} {RNA1310_10179} {RNA815_57140} Mlig455_000522 {REF} {Length: 2396} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=64.6]} {Human: ENSG00000143476, DTL, denticleless E3 ubiquitin protein ligase homolog, [RH, Score=184, Expect=8e-49]} {Mouse: ENSMUSG00000037474, Dtl, denticleless E3 ubiquitin protein ligase, [RH, Score=160, Expect=4e-41]} {Dmel: FBgn0013548, l(2)dtl, lethal-(2)-denticleless, [RH, Score=160, Expect=5e-41]} {Celegans: WBGene00011318, cdt-2, CDT (S. pombe CDC10 Dependent Transcript) homolog, [RH, Score=106, Expect=8e-24]} {Smed: dd_Smed_v6_15465_0_1, dd_Smed_v6_15465_0_1, [RH, Score=184, Expect=2e-50]} {RNA1509_28840} {RNA1310_10179} {RNA815_57140} Mlig455_024860 {REF} {Length: 2192} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=46.3]} {Human: ENSG00000143476, DTL, denticleless E3 ubiquitin protein ligase homolog, [Score=147, Expect=8e-37]} {Mouse: ENSMUSG00000037474, Dtl, denticleless E3 ubiquitin protein ligase, [Score=144, Expect=7e-36]} {Dmel: FBgn0013548, l(2)dtl, lethal-(2)-denticleless, [Score=127, Expect=2e-30]} {Celegans: WBGene00011318, cdt-2, CDT (S. pombe CDC10 Dependent Transcript) homolog, [Score=92.4, Expect=2e-19]} {Smed: dd_Smed_v6_15465_0_1, dd_Smed_v6_15465_0_1, [Score=154, Expect=3e-40]} {RNA1509_28840} {RNA1310_10179} {RNA815_57140} |
| 8. | MligTC455_26694 | 1228 | 25.58 | Mlig455_028310 | Neo: - Age: - |
RUVBL2 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_028310 {REF} {Length: 2045} {Pfam: TIP49 P-loop domain [PF06068.15, score=542.3]; TIP49 AAA-lid domain [PF17856.3, score=98.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=33.7]; AAA ATPase domain [PF13191.8, score=28.3]; DnaB-like helicase C terminal domain [PF03796.17, score=26.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=25.2]; AAA domain [PF13245.8, score=24.4]; AAA domain [PF13401.8, score=22.9]; Sigma-54 interaction domain [PF00158.28, score=21.9]; Magnesium chelatase, subunit ChlI [PF01078.23, score=21.0]; AAA domain [PF13481.8, score=20.9]} {Human: ENSG00000183207, RUVBL2, RuvB like AAA ATPase 2, [RH, Score=808, Expect=0.0]} {Mouse: ENSMUSG00000003868, Ruvbl2, RuvB-like protein 2, [RH, Score=806, Expect=0.0]} {Dmel: FBgn0040075, rept, reptin, [RH, Score=748, Expect=0.0]} {Celegans: WBGene00020687, ruvb-2, RuvB-like 2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_2547_0_1, dd_Smed_v6_2547_0_1, [RH, Score=740, Expect=0.0]} {RNA1509_12047} {RNA1310_13037} {RNA815_5004.1} |
| 9. | MligTC455_29462 | 23309 | 485.61 | Mlig455_021960 | Neo: - |
RPL5 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_021960 {REF} {Length: 1113} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=291.1]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=362, Expect=9e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=394, Expect=2e-138]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=322, Expect=1e-110]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=342, Expect=2e-118]} {RNA1509_154} {RNA1310_31746.1, RNA1509_154} {RNA1509_154, RNA815_10534.2} |
| 10. | MligTC455_15267 | 527 | 10.97 | Mlig455_038934 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_038934 {REF} {Length: 4442} {TRANSSPLICED} {Pfam: ALMS motif [PF15309.8, score=45.3]} {Smed: dd_Smed_v6_5064_0_1, dd_Smed_v6_5064_0_1, [Score=85.9, Expect=6e-17]} {RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383} {RNA1310_3943.1, RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383} {RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383, RNA815_11083} | |
| 11. | MligTC455_46679 | 287 | 5.97 | Mlig455_044214 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.515 |
C3orf58 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_044214 {REF} {Length: 1583} {TRANSSPLICED} {Pfam: Protein-kinase domain of FAM69 [PF12260.10, score=99.4]} {Human: ENSG00000181744, C3orf58, chromosome 3 open reading frame 58, [RH, Score=164, Expect=1e-45]} {Mouse: ENSMUSG00000045414, 1190002N15Rik, RIKEN cDNA 1190002N15 gene, [RH, Score=161, Expect=1e-44]} {Smed: dd_Smed_v6_8114_0_1, dd_Smed_v6_8114_0_1, [RH, Score=163, Expect=2e-45]} {RNA1509_12580} {RNA1310_17698.3} {RNA815_6835.1} |
| 12. | MligTC455_49655 | 957 | 19.94 | Mlig455_002453, Mlig455_002720 | Neo: - Age: logFC(26M/2M)=0.337 Regeneration-upregulated BL: 1.810 Regeneration-enriched BL: 1.810 |
UAP1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_002453 {REF} {Length: 2391} {TRANSSPLICED} {Pfam: UTP--glucose-1-phosphate uridylyltransferase [PF01704.20, score=131.3]} {Human: ENSG00000117143, UAP1, UDP-N-acetylglucosamine pyrophosphorylase 1, [Score=327, Expect=2e-106]; ENSG00000197355, UAP1L1, UDP-N-acetylglucosamine pyrophosphorylase 1 like 1, [Score=315, Expect=1e-101]} {Mouse: ENSMUSG00000026670, Uap1, UDP-N-acetylglucosamine pyrophosphorylase 1, [Score=339, Expect=3e-111]} {Dmel: FBgn0259749, mmy, mummy, [RH, Score=349, Expect=6e-115]} {Celegans: WBGene00007965, C36A4.4, Probable UDP-N-acetylglucosamine pyrophosphorylase, [RH, Score=239, Expect=4e-73]} {Smed: dd_Smed_v6_2150_1_1, dd_Smed_v6_2150_1_1, [Score=343, Expect=4e-113]} {RNA1509_18328} {RNA1310_8742, RNA1509_18328} {RNA1509_18328, RNA815_10366} Mlig455_002720 {REF} {Length: 2405} {Pfam: UTP--glucose-1-phosphate uridylyltransferase [PF01704.20, score=131.3]} {Human: ENSG00000117143, UAP1, UDP-N-acetylglucosamine pyrophosphorylase 1, [Score=327, Expect=2e-106]; ENSG00000197355, UAP1L1, UDP-N-acetylglucosamine pyrophosphorylase 1 like 1, [Score=313, Expect=7e-101]} {Mouse: ENSMUSG00000026670, Uap1, UDP-N-acetylglucosamine pyrophosphorylase 1, [Score=340, Expect=2e-111]} {Dmel: FBgn0259749, mmy, mummy, [Score=348, Expect=2e-115]} {Celegans: WBGene00007965, C36A4.4, Probable UDP-N-acetylglucosamine pyrophosphorylase, [Score=237, Expect=2e-72]} {Smed: dd_Smed_v6_2150_1_1, dd_Smed_v6_2150_1_1, [Score=348, Expect=2e-115]} {RNA1509_18328} {RNA1310_8742} {RNA815_10366} |