Data search
Results for MligTC455_34491
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34491 | 759 | 15.80 | Mlig455_059653 | Neo: - Age: Down-Up-Down |
SEC22B | Mlig455_059653 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: Regulated-SNARE-like domain [PF13774.8, score=46.2]; Synaptobrevin [PF00957.23, score=32.5]} {Human: ENSG00000265808, SEC22B, SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), [Score=182, Expect=8e-54]} {Mouse: ENSMUSG00000027879, Sec22b, SEC22 homolog B, vesicle trafficking protein, [Score=182, Expect=6e-54]} {Dmel: FBgn0260855, Sec22, Secretory 22, [Score=144, Expect=3e-40]} {Celegans: WBGene00018853, sec-22, Yeast SEC homolog, [Score=123, Expect=2e-32]} {Smed: dd_Smed_v6_8369_0_1, dd_Smed_v6_8369_0_1, [Score=201, Expect=8e-62]} {RNA1509_3231} {RNA1310_11259} {RNA815_14769} |
Cumulative graph for MligTC455_34491
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.322 | 4.26 | 0.02089 | 0.39614 | |
| RegionR2 | 0.894 | 4.26 | 0.28120 | 0.66791 | |
| RegionR3 | 1.127 | 4.26 | 0.08961 | 0.52853 | |
| RegionR4 | 1.399 | 4.26 | 0.04865 | 0.18924 | |
| RegionR5 | 1.316 | 4.26 | 0.02548 | 0.11525 | |
| RegionR6 | 1.036 | 4.26 | 0.14031 | 0.67324 | |
| RegionR7 | 0.955 | 4.26 | 0.23300 | 0.85720 | |
| RegionR8 | 0.595 | 4.26 | 0.52620 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 8.073 | 4.26 | 0.01587 | 0.53130 | |
| RegenerationR2 | -0.235 | 4.26 | 0.54167 | 0.88900 | |
| RegenerationR3 | 0.096 | 4.26 | 0.82111 | 0.98803 | |
| RegenerationR4 | -0.162 | 4.26 | 0.71319 | 0.95846 | |
| RegenerationR5 | -0.091 | 4.26 | 0.81391 | 0.99272 | |
| RegenerationR6 | -0.241 | 4.26 | 0.58831 | 0.86271 | |
| RegenerationBL | 0.625 | 4.26 | 0.19611 | 0.53229 | |
| RegenerationTP | 0.18 | 4.26 | 0.74038 | 1.00000 |
Genes with expression patterns similar to MligTC455_34491
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34491 | 759 | 15.8 | Mlig455_059653 | Neo: - Age: Down-Up-Down |
SEC22B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059653 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: Regulated-SNARE-like domain [PF13774.8, score=46.2]; Synaptobrevin [PF00957.23, score=32.5]} {Human: ENSG00000265808, SEC22B, SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), [Score=182, Expect=8e-54]} {Mouse: ENSMUSG00000027879, Sec22b, SEC22 homolog B, vesicle trafficking protein, [Score=182, Expect=6e-54]} {Dmel: FBgn0260855, Sec22, Secretory 22, [Score=144, Expect=3e-40]} {Celegans: WBGene00018853, sec-22, Yeast SEC homolog, [Score=123, Expect=2e-32]} {Smed: dd_Smed_v6_8369_0_1, dd_Smed_v6_8369_0_1, [Score=201, Expect=8e-62]} {RNA1509_3231} {RNA1310_11259} {RNA815_14769} |
| 2. | MligTC455_23581 | 225 | 4.69 | Mlig455_015808 | Neo: - Age: - |
NAA60 | 2.441 | 0.719 | - | - | - | 0.957 | 0.765 | Mlig455_015808 {REF} {Length: 6520} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=46.0]; Acetyltransferase (GNAT) domain [PF13508.9, score=26.8]; FR47-like protein [PF08445.12, score=24.8]; Acetyltransferase (GNAT) domain [PF13673.9, score=23.2]} {Human: ENSG00000122390, NAA60, N(alpha)-acetyltransferase 60, NatF catalytic subunit, [RH, Score=172, Expect=3e-52]} {Mouse: ENSMUSG00000005982, Naa60, N(alpha)-acetyltransferase 60, NatF catalytic subunit, [RH, Score=171, Expect=9e-52]} {Dmel: FBgn0036039, Naa60, N(alpha)-acetyltransferase 60, [RH, Score=165, Expect=1e-49]} {Celegans: WBGene00009277, F30F8.10, [RH, Score=120, Expect=1e-32]} {Smed: dd_Smed_v6_4766_0_1, dd_Smed_v6_4766_0_1, [RH, Score=150, Expect=7e-44]} {RNA1509_25064, RNA1509_33189} {RNA1310_13963, RNA1509_25064, RNA1509_33189} {RNA1509_25064, RNA1509_33189, RNA815_11012} |
| 3. | MligTC455_47784 | 987 | 20.56 | Mlig455_042427, Mlig455_042482 | Neo: Irradiation Age: Down-Up-Down |
LPIN3 | 0.975 | - | - | - | - | 0.975 | - | Mlig455_042427 {REF} {Length: 3949} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.0]; lipin, N-terminal conserved region [PF04571.16, score=124.4]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.2]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=447, Expect=2e-144]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=441, Expect=3e-142]; ENSMUSG00000020593, Lpin1, lipin 1, [RH, Score=427, Expect=2e-136]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=2e-108]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=2e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=1e-130]} {RNA1509_2460} {RNA1310_4371} {RNA815_2379.1} Mlig455_042482 {REF} {Length: 3845} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.1]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.3]; lipin, N-terminal conserved region [PF04571.16, score=87.5]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=414, Expect=5e-132]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=401, Expect=2e-127]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=6e-109]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=1e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=2e-131]} {RNA1509_2460, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1310_4371, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1509_26861, RNA1509_31871, RNA1509_42018, RNA815_2379.1} |
| 4. | MligTC455_36449 | 215 | 4.47 | Mlig455_015126 | Neo: - Age: - |
CLVS1 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_015126 {REF} {Length: 2923} {Pfam: CRAL/TRIO domain [PF00650.22, score=80.2]; Divergent CRAL/TRIO domain [PF13716.8, score=29.5]; CRAL/TRIO, N-terminal domain [PF03765.17, score=28.0]} {Human: ENSG00000177182, CLVS1, clavesin 1, [RH, Score=176, Expect=3e-51]} {Mouse: ENSMUSG00000041216, Clvs1, clavesin 1, [RH, Score=173, Expect=2e-50]; ENSMUSG00000019785, Clvs2, clavesin 2, [RH, Score=165, Expect=1e-47]} {Dmel: FBgn0032785, CG10026, [Score=91.7, Expect=1e-20]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_14357_0_1, dd_Smed_v6_14357_0_1, [Score=57.4, Expect=3e-09]} {RNA1509_19821, RNA1509_58987} {RNA1310_35993, RNA1509_58987} {RNA1509_58987, RNA815_16196.1} |
| 5. | MligTC455_37936 | 46 | 0.95 | Mlig455_035706 | Neo: - Age: Down-Down-Up |
CHL1 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_035706 {REF} {Length: 3149} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=60.6]; Immunoglobulin domain [PF13927.8, score=22.3]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=55.5, Expect=2e-07]; ENSG00000091129, NRCAM, neuronal cell adhesion molecule, [Score=53.5, Expect=2e-06]} {Mouse: ENSMUSG00000020598, Nrcam, neuronal cell adhesion molecule, [RH, Score=51.6, Expect=9e-07]} {Smed: dd_Smed_v6_9155_0_2, dd_Smed_v6_9155_0_2, [RH, Score=53.9, Expect=3e-07]} {RNA1509_1785} {RNA1310_5625, RNA1509_1785} {RNA1509_1785, RNA815_1660} |
| 6. | MligTC455_32878 | 230 | 4.8 | Mlig455_008146 | Neo: Int S/G2/M Age: - |
C17orf49 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_008146 {REF} {Length: 1485} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=24.5]} {Human: ENSG00000258315, C17orf49, chromosome 17 open reading frame 49, [Score=66.2, Expect=1e-12]} {Mouse: ENSMUSG00000020831, 0610010K14Rik, RIKEN cDNA 0610010K14 gene, [Score=63.2, Expect=5e-12]} {RNA1509_33009} {RNA1310_21976} {RNA815_11277} |
| 7. | MligTC455_12797 | 59 | 1.23 | Mlig455_049659 | Neo: - Age: - |
PCDHA5 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_049659 {REF} {Length: 4667} {Pfam: Cadherin domain [PF00028.19, score=196.7]; Cadherin-like [PF16184.7, score=28.8]; Cadherin-like [PF08266.14, score=24.3]} {Human: ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=174, Expect=5e-44]; ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=169, Expect=3e-42]; ENSG00000165194, PCDH19, protocadherin 19, [Score=166, Expect=4e-41]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=176, Expect=2e-44]; ENSMUSG00000102697, Pcdhac2, protocadherin alpha subfamily C, 2, [Score=169, Expect=3e-42]} {Dmel: FBgn0284247, ds, dachsous, [Score=182, Expect=5e-46]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=154, Expect=2e-37]} {Smed: dd_Smed_v6_12697_0_1, dd_Smed_v6_12697_0_1, [Score=219, Expect=7e-59]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760} |
| 8. | MligTC455_32300 | 256 | 5.34 | Mlig455_036534 | Neo: - Age: - Region-enriched R2: 2.018/0.04615 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_036534 {REF} {Length: 3738} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [Score=88.2, Expect=4e-20]} {RNA1509_24553, RNA1509_27954} {RNA1310_25241.1, RNA1509_24553, RNA1509_27954} {RNA1509_24553, RNA1509_27954, RNA815_10356} | |
| 9. | MligTC455_15646 | 129 | 2.68 | Mlig455_029052 | Neo: - Age: - Region-enriched R4: 3.809/0.00771 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_029052 {REF} {Length: 1067} {RNA1310_32832} {RNA815_22228} | |
| 10. | MligTC455_51404 | 1678 | 34.95 | Mlig455_004713 | Neo: - Age: - |
PRPF6 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_004713 {REF} {Length: 2968} {TRANSSPLICED} {Pfam: PRP1 splicing factor, N-terminal [PF06424.14, score=183.9]; Tetratricopeptide repeat [PF13428.8, score=111.3]; Tetratricopeptide repeat [PF14559.8, score=59.4]; Tetratricopeptide repeat [PF07719.19, score=57.1]; Tetratricopeptide repeat [PF13181.8, score=45.6]; Tetratricopeptide repeat [PF13432.8, score=44.8]; Tetratricopeptide repeat [PF13431.8, score=37.1]; FAT domain [PF02259.25, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.0]; TPR repeat [PF13414.8, score=22.4]; Suppressor of forked protein (Suf) [PF05843.16, score=18.9]} {Human: ENSG00000101161, PRPF6, pre-mRNA processing factor 6, [RH, Score=1219, Expect=0.0]} {Mouse: ENSMUSG00000002455, Prpf6, pre-mRNA splicing factor 6, [RH, Score=1225, Expect=0.0]} {Dmel: FBgn0036828, CG6841, [RH, Score=1189, Expect=0.0]} {Celegans: WBGene00013343, prp-6, Yeast PRP (Splicing factor) related, [RH, Score=1031, Expect=0.0]} {Smed: dd_Smed_v6_1153_0_1, dd_Smed_v6_1153_0_1, [RH, Score=979, Expect=0.0]} {RNA1509_2962} {RNA1310_1406.1} {RNA815_394.1} |
| 11. | MligTC455_34374 | 2377 | 49.53 | Mlig455_032521 | Neo: - Age: logFC(26M/2M)=-0.486 Region-enriched R4: 1.400/0.00000 |
PAM16 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_032521 {REF} {Length: 865} {TRANSSPLICED} {Pfam: Pam16 [PF03656.15, score=120.3]} {Human: ENSG00000282228, PAM16, presequence translocase associated motor 16, [RH, Score=98.6, Expect=2e-26]; ENSG00000217930, PAM16, presequence translocase associated motor 16, [RH, Score=98.6, Expect=2e-26]} {Mouse: ENSMUSG00000045886, Gm9803, predicted gene 9803, [RH, Score=100, Expect=9e-28]; ENSMUSG00000014301, Pam16, presequence translocase-asssociated motor 16 homolog (S. cerevisiae), [RH, Score=100, Expect=9e-28]} {Dmel: FBgn0038387, blp, black pearl, [RH, Score=114, Expect=5e-33]} {Celegans: WBGene00009734, F45G2.8, Mitochondrial import inner membrane translocase subunit tim-16, [RH, Score=105, Expect=1e-29]} {Smed: dd_Smed_v6_1720_0_1, dd_Smed_v6_1720_0_1, [RH, Score=110, Expect=6e-32]} {RNA1509_17135, RNA1509_19581, RNA1509_22679, RNA1509_44044} {RNA1310_40855.1, RNA1509_17135, RNA1509_19581, RNA1509_22679, RNA1509_44044} {RNA1509_17135, RNA1509_19581, RNA1509_22679, RNA1509_44044, RNA815_19465} |
| 12. | MligTC455_53028 | 203 | 4.22 | Mlig455_047191 | Neo: - Age: - |
GCM2 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_047191 {REF} {Length: 2622} {Pfam: GCM motif protein [PF03615.17, score=222.5]} {Human: ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=190, Expect=1e-52]; ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=189, Expect=8e-53]} {Mouse: ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=189, Expect=4e-56]; ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=185, Expect=1e-51]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=222, Expect=1e-64]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=180, Expect=8e-51]} {RNA1509_58813} {RNA1310_10166.1} {RNA815_24649} |
| 13. | MligTC455_26620 | 34 | 0.7 | Mlig455_008129, Mlig455_008132 | Neo: - Age: Up-Down-Down |
0.953 | - | - | - | - | 0.953 | - | Mlig455_008129 {REF} {Length: 1793} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1} Mlig455_008132 {REF} {Length: 2431} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1} |
|
| 14. | MligTC455_43812 | 735 | 15.32 | Mlig455_002415, Mlig455_025902, Mlig455_033877, Mlig455_041426, Mlig455_048129, Mlig455_048829, Mlig455_052088 | Neo: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_002415 {REF} {Length: 1845} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=29.2]} {RNA1509_17916} {RNA1310_11712} {RNA815_9244} Mlig455_025902 {REF} {Length: 1845} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=29.1]} {RNA1509_17916} {RNA1310_11712} {RNA815_9244} Mlig455_033877 {REF} {Length: 2089} {TRANSSPLICED} {RNA1509_17916} {RNA1310_11712} {RNA815_9244} Mlig455_041426 {REF} {Length: 1757} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=29.3]} {RNA1509_17916} {RNA1310_11712} {RNA815_9244} Mlig455_048129 {REF} {Length: 1844} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=29.1]} {RNA1509_17916} {RNA1310_11712} {RNA815_9244} Mlig455_048829 {REF} {Length: 1845} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=26.8]} {RNA1509_17916} {RNA1310_11712} {RNA815_9244} Mlig455_052088 {REF} {Length: 1845} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=29.1]} {RNA1509_17916} {RNA1310_11712, RNA1509_17916} {RNA1509_17916, RNA815_9244} |
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