Data search
Results for MligTC455_34510
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34510 | 864 | 18.00 | Mlig455_062178 | Neo: - Age: Down-Up-Down |
SMARCE1 | Mlig455_062178 {REF} {Length: 3608} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=57.9]; HMG-box domain [PF09011.12, score=26.7]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=190, Expect=8e-54]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=189, Expect=3e-53]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [RH, Score=169, Expect=7e-44]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=124, Expect=4e-31]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [RH, Score=188, Expect=2e-50]} {RNA1509_22933, RNA1509_28457, RNA1509_50301} {RNA1310_9143, RNA1509_22933, RNA1509_28457, RNA1509_50301} {RNA1509_22933, RNA1509_28457, RNA1509_50301, RNA815_18799} |
Cumulative graph for MligTC455_34510
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.039 | 4.348 | 0.96790 | 1.00000 | |
| RegionR2 | 0.18 | 4.348 | 0.60948 | 0.95753 | |
| RegionR3 | -0.237 | 4.348 | 0.44660 | 0.95997 | |
| RegionR4 | 0.472 | 4.348 | 0.18211 | 0.45323 | |
| RegionR5 | 0.329 | 4.348 | 0.22463 | 0.52836 | |
| RegionR6 | 0.147 | 4.348 | 0.63257 | 1.00000 | |
| RegionR7 | 0.122 | 4.348 | 0.77292 | 1.00000 | |
| RegionR8 | -0.974 | 4.348 | 0.13096 | 0.66294 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.454 | 4.348 | 0.37042 | 1.00000 | |
| RegenerationR2 | -0.189 | 4.348 | 0.46636 | 0.85595 | |
| RegenerationR3 | 0.087 | 4.348 | 0.78318 | 0.97655 | |
| RegenerationR4 | -0.436 | 4.348 | 0.16961 | 0.60627 | |
| RegenerationR5 | 0.007 | 4.348 | 0.98079 | 1.00000 | |
| RegenerationR6 | 0.506 | 4.348 | 0.09526 | 0.38405 | |
| RegenerationBL | 0.206 | 4.348 | 0.63671 | 0.97594 | |
| RegenerationTP | 0.592 | 4.348 | 0.22111 | 0.66475 |
Genes with expression patterns similar to MligTC455_34510
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34510 | 864 | 18 | Mlig455_062178 | Neo: - Age: Down-Up-Down |
SMARCE1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062178 {REF} {Length: 3608} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=57.9]; HMG-box domain [PF09011.12, score=26.7]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=190, Expect=8e-54]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=189, Expect=3e-53]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [RH, Score=169, Expect=7e-44]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=124, Expect=4e-31]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [RH, Score=188, Expect=2e-50]} {RNA1509_22933, RNA1509_28457, RNA1509_50301} {RNA1310_9143, RNA1509_22933, RNA1509_28457, RNA1509_50301} {RNA1509_22933, RNA1509_28457, RNA1509_50301, RNA815_18799} |
| 2. | MligTC455_34511 | 752 | 15.67 | Mlig455_062211 | Neo: - Age: - |
SMARCE1 | 4.841 | 0.964 | 0.988 | 0.938 | - | 0.963 | 0.988 | Mlig455_062211 {REF} {Length: 4858} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=57.9]; HMG-box domain [PF09011.12, score=26.7]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=190, Expect=8e-54]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=189, Expect=2e-53]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [RH, Score=169, Expect=4e-44]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=124, Expect=8e-31]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [RH, Score=188, Expect=2e-50]} {RNA1509_28457, RNA1509_53297} {RNA1310_9143, RNA1509_53297} {RNA1509_53297, RNA815_18799} |
| 3. | MligTC455_52712 | 993 | 20.69 | Mlig455_015809 | Neo: - Age: - |
GRIK3 | 2.456 | 0.758 | - | - | 0.955 | 0.743 | - | Mlig455_015809 {REF} {Length: 2658} {TRANSSPLICED} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=109.0]; Ligand-gated ion channel [PF00060.28, score=70.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=68.6]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=227, Expect=6e-65]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=218, Expect=6e-62]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=226, Expect=2e-64]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=218, Expect=9e-62]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=215, Expect=1e-60]} {Dmel: FBgn0038840, Grik, [Score=217, Expect=1e-61]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=215, Expect=1e-60]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [Score=214, Expect=2e-60]} {RNA1509_12805, RNA1509_13207} {RNA1310_18144.1, RNA1509_12805, RNA1509_13207} {RNA1509_12805, RNA1509_13207, RNA815_9040} |
| 4. | MligTC455_47459 | 866 | 18.03 | Mlig455_020310 | Neo: - Age: - |
RALGPS1 | 1.842 | 0.892 | - | - | 0.950 | - | - | Mlig455_020310 {REF} {Length: 4259} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=166.7]} {Human: ENSG00000136828, RALGPS1, Ral GEF with PH domain and SH3 binding motif 1, [RH, Score=278, Expect=2e-83]; ENSG00000116191, RALGPS2, Ral GEF with PH domain and SH3 binding motif 2, [RH, Score=271, Expect=2e-80]} {Mouse: ENSMUSG00000038831, Ralgps1, Ral GEF with PH domain and SH3 binding motif 1, [RH, Score=276, Expect=2e-82]; ENSMUSG00000026594, Ralgps2, Ral GEF with PH domain and SH3 binding motif 2, [RH, Score=271, Expect=7e-82]} {Dmel: FBgn0034158, CG5522, [RH, Score=281, Expect=5e-83]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=74.3, Expect=2e-13]} {Smed: dd_Smed_v6_9244_0_1, dd_Smed_v6_9244_0_1, [RH, Score=218, Expect=5e-59]} {RNA1509_3628} {RNA1310_3714.1} {RNA815_2665} |
| 5. | MligTC455_46575 | 1334 | 27.8 | Mlig455_028040 | Neo: - Age: - Region-enriched R6: 1.097/0.02048 |
ANGPT4 | 1.727 | - | - | - | 0.959 | - | 0.768 | Mlig455_028040 {REF} {Length: 4171} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=102.3]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=94.7, Expect=9e-20]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=90.9, Expect=2e-20]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=88.2, Expect=8e-18]; ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=84.7, Expect=1e-16]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=84.7, Expect=8e-17]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=84.0, Expect=2e-16]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=84.0, Expect=4e-16]} {Dmel: FBgn0003326, sca, scabrous, [Score=92.8, Expect=3e-19]} {Celegans: WBGene00020516, T15B7.1, [RH, Score=70.9, Expect=7e-13]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=96.3, Expect=2e-20]} {RNA1509_37814} {RNA1310_10211.1} {RNA815_5198} |
| 6. | MligTC455_43328 | 180 | 3.75 | Mlig455_007116 | Neo: - Age: Up-Down-Down Region-enriched R5: 2.390/0.01781 |
SMURF1 | 1.722 | - | 0.769 | - | - | - | 0.953 | Mlig455_007116 {REF} {Length: 5151} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=302.6]; WW domain [PF00397.28, score=64.1]; C2 domain [PF00168.32, score=48.5]} {Human: ENSG00000198742, SMURF1, SMAD specific E3 ubiquitin protein ligase 1, [RH, Score=734, Expect=0.0]; ENSG00000284126, SMURF1, SMAD specific E3 ubiquitin protein ligase 1, [RH, Score=734, Expect=0.0]; ENSG00000108854, SMURF2, SMAD specific E3 ubiquitin protein ligase 2, [RH, Score=728, Expect=0.0]} {Mouse: ENSMUSG00000018363, Smurf2, SMAD specific E3 ubiquitin protein ligase 2, [RH, Score=729, Expect=0.0]} {Dmel: FBgn0259174, Nedd4, [Score=408, Expect=1e-131]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=400, Expect=1e-132]} {Smed: dd_Smed_v6_4374_0_1, dd_Smed_v6_4374_0_1, [Score=395, Expect=7e-128]} {RNA1509_42014} {RNA1310_6371, RNA1509_42014} {RNA1509_42014, RNA815_15558} |
| 7. | MligTC455_39050 | 1658 | 34.53 | Mlig455_051491, Mlig455_051528 | Neo: - Age: - |
SH2D5 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_051491 {REF} {Length: 4946} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=40.9]; SH2 domain [PF00017.26, score=36.5]; Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=23.2]} {Human: ENSG00000189410, SH2D5, SH2 domain containing 5, [RH, Score=133, Expect=2e-33]} {Mouse: ENSMUSG00000045349, Sh2d5, SH2 domain containing 5, [RH, Score=125, Expect=8e-31]} {Dmel: FBgn0053993, CG33993, [RH, Score=122, Expect=4e-30]} {Celegans: WBGene00020867, shc-2, SHC (Src Homology domain C-terminal) adaptor homolog, [RH, Score=74.7, Expect=6e-14]} {Smed: dd_Smed_v6_7177_0_1, dd_Smed_v6_7177_0_1, [RH, Score=171, Expect=1e-46]} {RNA1509_15925, RNA1509_31526} {RNA1310_15674, RNA1509_15925, RNA1509_31526} {RNA1509_15925, RNA1509_31526, RNA815_21975} Mlig455_051528 {REF} {Length: 4046} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=33.0]; SH2 domain [PF00017.26, score=32.8]; Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=21.0]} {Human: ENSG00000189410, SH2D5, SH2 domain containing 5, [Score=105, Expect=9e-24]} {Mouse: ENSMUSG00000045349, Sh2d5, SH2 domain containing 5, [Score=100, Expect=2e-22]} {Dmel: FBgn0053993, CG33993, [Score=88.2, Expect=2e-19]} {Celegans: WBGene00020867, shc-2, SHC (Src Homology domain C-terminal) adaptor homolog, [Score=67.8, Expect=8e-12]} {Smed: dd_Smed_v6_7177_0_1, dd_Smed_v6_7177_0_1, [Score=148, Expect=2e-38]} {RNA1509_15925} {RNA1310_15674} {RNA815_21975} |
| 8. | MligTC455_27995 | 229 | 4.77 | Mlig455_000174, Mlig455_015369 | Neo: - Age: - |
0.974 | - | - | - | 0.974 | - | - | Mlig455_000174 {REF} {Length: 4732} {Celegans: WBGene00016348, C33E10.6, [Score=152, Expect=2e-41]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=137, Expect=7e-37]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1} Mlig455_015369 {REF} {Length: 3981} {Celegans: WBGene00016348, C33E10.6, [Score=149, Expect=2e-40]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=135, Expect=4e-36]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1} |
|
| 9. | MligTC455_38157 | 1731 | 36.05 | Mlig455_062544, Mlig455_068592 | Neo: - Age: - Region-enriched R7: 1.416/0.00051 Regeneration-upregulated R5: 1.336 Regeneration-enriched R5: 1.336 |
0.968 | - | - | - | 0.968 | - | - | Mlig455_062544 {REF} {Length: 5571} {RNA1509_20647} {RNA1310_9228} {RNA815_9490} Mlig455_068592 {REF} {Length: 1899} {RNA1509_20647, RNA1509_51373} {RNA1310_3519, RNA1509_51373} {RNA1509_51373, RNA815_9490} |
|
| 10. | MligTC455_29431 | 797 | 16.59 | Mlig455_025887 | Neo: - Age: - Region-enriched R5: 1.079/0.00034 |
RPS6KB1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_025887 {REF} {Length: 4756} {Pfam: Protein kinase domain [PF00069.27, score=231.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.8]; Integrase zinc binding domain [PF17921.3, score=47.6]; Protein kinase C terminal domain [PF00433.26, score=40.8]; Kinase-like [PF14531.8, score=27.5]; ABC1 atypical kinase-like domain [PF03109.18, score=18.1]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=489, Expect=6e-168]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=489, Expect=3e-167]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=467, Expect=4e-159]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [RH, Score=457, Expect=1e-154]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [RH, Score=466, Expect=3e-159]} {RNA1509_12463} {RNA1310_6456} {RNA815_17601} |
| 11. | MligTC455_44090 | 979 | 20.4 | Mlig455_015710 | Neo: - Age: - Region-enriched R2: 1.571/0.01808 Regeneration-upregulated R3: 1.474 Regeneration-enriched R3: 1.474 |
0.96 | - | - | - | 0.960 | - | - | Mlig455_015710 {REF} {Length: 3031} {TRANSSPLICED} {Mouse: ENSMUSG00000018412, Kansl1, KAT8 regulatory NSL complex subunit 1, [Score=50.1, Expect=1e-05]} {RNA1509_6174} {RNA1310_5481, RNA1509_6174} {RNA1509_6174, RNA815_11204} | |
| 12. | MligTC455_20797 | 1741 | 36.27 | Mlig455_054800, Mlig455_054894 | Neo: - Age: - Region-enriched R5: 1.367/0.00000 Regeneration-upregulated R6: 1.065 Regeneration-enriched R6: 1.065 |
MEMO1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_054800 {REF} {Length: 3119} {TRANSSPLICED} {Pfam: Memo-like protein [PF01875.19, score=282.9]} {Human: ENSG00000162959, MEMO1, mediator of cell motility 1, [RH, Score=312, Expect=3e-106]} {Mouse: ENSMUSG00000058704, Memo1, mediator of cell motility 1, [RH, Score=311, Expect=3e-106]} {Dmel: FBgn0038110, CG8031, [RH, Score=338, Expect=4e-117]} {Celegans: WBGene00016500, memo-1, Protein memo-1 homolog, [RH, Score=290, Expect=5e-98]} {Smed: dd_Smed_v6_4673_0_1, dd_Smed_v6_4673_0_1, [RH, Score=325, Expect=8e-112]} {RNA1509_18877, RNA1509_22115, RNA1509_44869} {RNA1310_19423, RNA1509_18877, RNA1509_22115, RNA1509_44869} {RNA1509_18877, RNA1509_22115, RNA1509_44869, RNA815_8073.1} Mlig455_054894 {REF} {Length: 3082} {TRANSSPLICED} {Pfam: Memo-like protein [PF01875.19, score=283.0]} {Human: ENSG00000162959, MEMO1, mediator of cell motility 1, [RH, Score=312, Expect=2e-106]} {Mouse: ENSMUSG00000058704, Memo1, mediator of cell motility 1, [RH, Score=311, Expect=3e-106]} {Dmel: FBgn0038110, CG8031, [RH, Score=339, Expect=3e-117]} {Celegans: WBGene00016500, memo-1, Protein memo-1 homolog, [RH, Score=291, Expect=2e-98]} {Smed: dd_Smed_v6_4673_0_1, dd_Smed_v6_4673_0_1, [RH, Score=325, Expect=4e-112]} {RNA1509_22115, RNA1509_47236, RNA1509_9747} {RNA1310_19550, RNA1509_47236, RNA1509_9747} {RNA1509_47236, RNA1509_9747, RNA815_8073.1} |
| 13. | MligTC455_23455 | 258 | 5.38 | Mlig455_070572 | Neo: Int S/G2/M Age: - |
LRR1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_070572 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=40.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=29.1]} {Human: ENSG00000165501, LRR1, leucine rich repeat protein 1, [RH, Score=86.3, Expect=9e-18]} {Mouse: ENSMUSG00000029028, Lrrc47, leucine rich repeat containing 47, [Score=67.4, Expect=1e-11]} {Dmel: FBgn0010398, Lrr47, Leucine-rich repeat 47, [RH, Score=80.1, Expect=6e-16]} {Celegans: WBGene00015779, lrch-1, Leucine-rich Repeats (LRR) and Calponin Homology (CH) domain homolog, [Score=59.3, Expect=2e-09]} {Smed: dd_Smed_v6_29200_0_2, dd_Smed_v6_29200_0_2, [RH, Score=102, Expect=9e-25]} {RNA1509_56534} {RNA1310_17237.1, RNA1509_56534} {RNA1509_56534, RNA815_44907} |
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