Data search
Results for MligTC455_38157
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38157 | 1731 | 36.05 | Mlig455_062544, Mlig455_068592 | Neo: - Age: - Region-enriched R7: 1.416/0.00051 Regeneration-upregulated R5: 1.336 Regeneration-enriched R5: 1.336 |
Mlig455_062544 {REF} {Length: 5571} {RNA1509_20647} {RNA1310_9228} {RNA815_9490} Mlig455_068592 {REF} {Length: 1899} {RNA1509_20647, RNA1509_51373} {RNA1310_3519, RNA1509_51373} {RNA1509_51373, RNA815_9490} |
Cumulative graph for MligTC455_38157
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.318 | 5.262 | 0.71679 | 1.00000 | |
| RegionR2 | 0.44 | 5.262 | 0.18950 | 0.54463 | |
| RegionR3 | -0.5 | 5.262 | 0.09527 | 0.54242 | |
| RegionR4 | -0.67 | 5.262 | 0.05630 | 0.20898 | |
| RegionR5 | -1.128 | 5.262 | 0.00017 | 0.00249 | |
| RegionR6 | 0.201 | 5.262 | 0.47682 | 1.00000 | |
| RegionR7 | 1.416 | 5.262 | 0.00001 | 0.00051 | |
| RegionR8 | 0.559 | 5.262 | 0.23390 | 0.84866 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.427 | 5.262 | 0.73111 | 1.00000 | |
| RegenerationR2 | -0.14 | 5.262 | 0.62669 | 0.92583 | |
| RegenerationR3 | 0.719 | 5.262 | 0.02824 | 0.30224 | |
| RegenerationR4 | 0.536 | 5.262 | 0.10744 | 0.50503 | |
| RegenerationR5 | 1.336 | 5.262 | 0.00002 | 0.00506 | Specific for R5: 1.336 |
| RegenerationR6 | 0.996 | 5.262 | 0.00108 | 0.03614 | |
| RegenerationBL | 0.281 | 5.262 | 0.39595 | 0.76481 | |
| RegenerationTP | -0.238 | 5.262 | 0.52423 | 0.91656 |
Genes with expression patterns similar to MligTC455_38157
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38157 | 1731 | 36.05 | Mlig455_062544, Mlig455_068592 | Neo: - Age: - Region-enriched R7: 1.416/0.00051 Regeneration-upregulated R5: 1.336 Regeneration-enriched R5: 1.336 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062544 {REF} {Length: 5571} {RNA1509_20647} {RNA1310_9228} {RNA815_9490} Mlig455_068592 {REF} {Length: 1899} {RNA1509_20647, RNA1509_51373} {RNA1310_3519, RNA1509_51373} {RNA1509_51373, RNA815_9490} |
|
| 2. | MligTC455_08170 | 389 | 8.1 | Mlig455_014125, Mlig455_014135 | Neo: - Age: - |
NOTCH1, POMGNT1 | 2.579 | 0.702 | - | - | 0.955 | 0.922 | - | Mlig455_014125 {REF} {Length: 4033} {Pfam: Calcium-binding EGF domain [PF07645.17, score=46.0]; EGF-like domain [PF00008.29, score=29.6]; Coagulation Factor Xa inhibitory site [PF14670.8, score=22.8]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=103, Expect=9e-22]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=112, Expect=1e-24]} {Dmel: FBgn0004647, N, Notch, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=62.0, Expect=3e-09]} {Smed: dd_Smed_v6_10716_0_1, dd_Smed_v6_10716_0_1, [Score=152, Expect=3e-37]} {RNA1509_33760} {RNA1310_5100.1} {RNA815_30516} Mlig455_014135 {REF} {Length: 2813} {Pfam: Calcium-binding EGF domain [PF07645.17, score=122.7]; EGF-like domain [PF00008.29, score=113.6]; Coagulation Factor Xa inhibitory site [PF14670.8, score=81.1]; Human growth factor-like EGF [PF12661.9, score=79.2]; Complement Clr-like EGF-like [PF12662.9, score=58.9]; EGF-like domain [PF07974.15, score=50.3]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=196, Expect=1e-50]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=201, Expect=2e-52]} {Dmel: FBgn0004647, N, Notch, [Score=158, Expect=4e-39]} {Celegans: WBGene00003001, lin-12, [Score=124, Expect=1e-28]} {Smed: dd_Smed_v6_10716_0_1, dd_Smed_v6_10716_0_1, [RH, Score=344, Expect=3e-104]} {RNA1509_33760} {RNA1310_5100.1, RNA1509_33760} {RNA1509_33760, RNA815_30516} |
| 3. | MligTC455_23455 | 258 | 5.38 | Mlig455_070572 | Neo: Int S/G2/M Age: - |
LRR1 | 0.973 | - | - | - | 0.973 | - | - | Mlig455_070572 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=40.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=29.1]} {Human: ENSG00000165501, LRR1, leucine rich repeat protein 1, [RH, Score=86.3, Expect=9e-18]} {Mouse: ENSMUSG00000029028, Lrrc47, leucine rich repeat containing 47, [Score=67.4, Expect=1e-11]} {Dmel: FBgn0010398, Lrr47, Leucine-rich repeat 47, [RH, Score=80.1, Expect=6e-16]} {Celegans: WBGene00015779, lrch-1, Leucine-rich Repeats (LRR) and Calponin Homology (CH) domain homolog, [Score=59.3, Expect=2e-09]} {Smed: dd_Smed_v6_29200_0_2, dd_Smed_v6_29200_0_2, [RH, Score=102, Expect=9e-25]} {RNA1509_56534} {RNA1310_17237.1, RNA1509_56534} {RNA1509_56534, RNA815_44907} |
| 4. | MligTC455_34510 | 864 | 18 | Mlig455_062178 | Neo: - Age: Down-Up-Down |
SMARCE1 | 0.968 | - | - | - | 0.968 | - | - | Mlig455_062178 {REF} {Length: 3608} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=57.9]; HMG-box domain [PF09011.12, score=26.7]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=190, Expect=8e-54]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [RH, Score=189, Expect=3e-53]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [RH, Score=169, Expect=7e-44]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=124, Expect=4e-31]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [RH, Score=188, Expect=2e-50]} {RNA1509_22933, RNA1509_28457, RNA1509_50301} {RNA1310_9143, RNA1509_22933, RNA1509_28457, RNA1509_50301} {RNA1509_22933, RNA1509_28457, RNA1509_50301, RNA815_18799} |
| 5. | MligTC455_22790 | 8950 | 186.46 | Mlig455_009210 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.204 |
HNRNPK | 0.961 | - | - | - | 0.961 | - | - | Mlig455_009210 {REF} {Length: 1967} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=98.4]; KH domain [PF07650.19, score=46.7]; KH domain [PF13083.8, score=20.8]} {Human: ENSG00000165119, HNRNPK, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=6e-46]} {Mouse: ENSMUSG00000021546, Hnrnpk, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=5e-47]} {Dmel: FBgn0267791, HnRNP-K, Heterogeneous nuclear ribonucleoprotein K, [RH, Score=153, Expect=2e-42]} {Celegans: WBGene00017816, hrpk-1, Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog, [Score=154, Expect=8e-44]} {Smed: dd_Smed_v6_1998_0_1, dd_Smed_v6_1998_0_1, [RH, Score=163, Expect=3e-46]} {RNA1509_10759, RNA1509_1170} {RNA1310_6557.1, RNA1509_10759, RNA1509_1170} {RNA1509_10759, RNA1509_1170, RNA815_5052.1} |
| 6. | MligTC455_22791 | 8103 | 168.82 | Mlig455_037099 | Neo: Int S/G2/M Age: Down-Up-Down |
HNRNPK | 0.959 | - | - | - | 0.959 | - | - | Mlig455_037099 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=155.3]; KH domain [PF07650.19, score=61.7]; KH domain [PF13083.8, score=20.5]} {Human: ENSG00000165119, HNRNPK, heterogeneous nuclear ribonucleoprotein K, [RH, Score=161, Expect=2e-45]} {Mouse: ENSMUSG00000021546, Hnrnpk, heterogeneous nuclear ribonucleoprotein K, [RH, Score=162, Expect=1e-46]} {Dmel: FBgn0267791, HnRNP-K, Heterogeneous nuclear ribonucleoprotein K, [RH, Score=151, Expect=3e-41]} {Celegans: WBGene00017816, hrpk-1, Heterogeneous nuclear RibonucleoProtein (HnRNP) K homolog, [RH, Score=213, Expect=1e-65]} {Smed: dd_Smed_v6_1569_0_1, dd_Smed_v6_1569_0_1, [RH, Score=206, Expect=3e-63]} {RNA1509_10759} {RNA1310_6557.1} {RNA815_5052.1} |
| 7. | MligTC455_39050 | 1658 | 34.53 | Mlig455_051491, Mlig455_051528 | Neo: - Age: - |
SH2D5 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_051491 {REF} {Length: 4946} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=40.9]; SH2 domain [PF00017.26, score=36.5]; Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=23.2]} {Human: ENSG00000189410, SH2D5, SH2 domain containing 5, [RH, Score=133, Expect=2e-33]} {Mouse: ENSMUSG00000045349, Sh2d5, SH2 domain containing 5, [RH, Score=125, Expect=8e-31]} {Dmel: FBgn0053993, CG33993, [RH, Score=122, Expect=4e-30]} {Celegans: WBGene00020867, shc-2, SHC (Src Homology domain C-terminal) adaptor homolog, [RH, Score=74.7, Expect=6e-14]} {Smed: dd_Smed_v6_7177_0_1, dd_Smed_v6_7177_0_1, [RH, Score=171, Expect=1e-46]} {RNA1509_15925, RNA1509_31526} {RNA1310_15674, RNA1509_15925, RNA1509_31526} {RNA1509_15925, RNA1509_31526, RNA815_21975} Mlig455_051528 {REF} {Length: 4046} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=33.0]; SH2 domain [PF00017.26, score=32.8]; Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=21.0]} {Human: ENSG00000189410, SH2D5, SH2 domain containing 5, [Score=105, Expect=9e-24]} {Mouse: ENSMUSG00000045349, Sh2d5, SH2 domain containing 5, [Score=100, Expect=2e-22]} {Dmel: FBgn0053993, CG33993, [Score=88.2, Expect=2e-19]} {Celegans: WBGene00020867, shc-2, SHC (Src Homology domain C-terminal) adaptor homolog, [Score=67.8, Expect=8e-12]} {Smed: dd_Smed_v6_7177_0_1, dd_Smed_v6_7177_0_1, [Score=148, Expect=2e-38]} {RNA1509_15925} {RNA1310_15674} {RNA815_21975} |
| 8. | MligTC455_32364 | 7013 | 146.11 | Mlig455_029729 | Neo: Germline Age: Up-Down-Up Region-enriched R6: 6.713/0.00000 |
ZAN | 0.955 | - | - | - | 0.955 | - | - | Mlig455_029729 {REF} {Length: 12468} {Pfam: ShK domain-like [PF01549.26, score=25.4]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=96.7, Expect=1e-18]; ENSG00000197558, SSPO, SCO-spondin, [Score=93.2, Expect=1e-17]} {Mouse: ENSMUSG00000047730, Fcgbp, Fc fragment of IgG binding protein, [Score=90.9, Expect=4e-17]; ENSMUSG00000079173, Zan, zonadhesin, [Score=90.9, Expect=4e-17]} {Smed: dd_Smed_v6_91_0_1, dd_Smed_v6_91_0_1, [Score=283, Expect=9e-76]} {RNA1509_38} {RNA1310_23} {RNA815_13} |
| 9. | MligTC455_53163 | 1977 | 41.19 | Mlig455_019251, Mlig455_035528 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.248 Region-enriched R5: 1.075/0.00039 |
SRSF12 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_019251 {REF} {Length: 923} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.3]} {Human: ENSG00000154548, SRSF12, serine and arginine rich splicing factor 12, [RH, Score=91.3, Expect=4e-22]; ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=90.5, Expect=8e-22]} {Mouse: ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=91.3, Expect=3e-22]; ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=90.5, Expect=5e-22]} {Dmel: FBgn0003742, tra2, transformer 2, [Score=58.2, Expect=1e-10]} {Celegans: WBGene00001368, exc-7, [Score=54.3, Expect=8e-09]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=110, Expect=6e-32]} {RNA1509_11158, RNA1509_18186} {RNA1310_27314, RNA1509_18186} {RNA1509_18186, RNA815_2294.1} Mlig455_035528 {REF} {Length: 1719} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.2]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=50.4, Expect=9e-07]} {RNA1509_11158} {RNA1310_14150.1} {RNA815_2294.1} |