TomoSeq data search

Data search

Results for MligTC455_34546

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34546

34

0.72

Mlig455_033259

Neo: -

Age: logFC(26M/2M)=-0.642

TNKS

Mlig455_033259 {REF} {Length: 4261} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=75.2]; Spectrin repeat [PF00435.23, score=33.4]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=62.4, Expect=2e-09]; ENSG00000285372, AC270292.3, tankyrase, [Score=62.4, Expect=2e-09]; ENSG00000107854, TNKS2, tankyrase 2, [Score=62.0, Expect=3e-09]; ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=62.4, Expect=2e-09]; ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=62.0, Expect=2e-09]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=65.9, Expect=1e-10]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=59.7, Expect=5e-09]} {RNA1509_42623} {RNA1310_17668.1} {RNA815_15244}

Cumulative graph for MligTC455_34546

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.28	1.27	0.99967	1.00000
RegionR2	1.137	1.27	0.41089	0.80425
RegionR3	1.8	1.27	0.15575	0.66729
RegionR4	2.377	1.27	0.09845	0.30439
RegionR5	-0.479	1.27	0.79551	1.00000
RegionR6	1.575	1.27	0.22799	0.81047
RegionR7	-2.592	1.27	1.00000	1.00000
RegionR8	-2.537	1.27	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.593	1.27	0.99995	1.00000
RegenerationR2	-0.133	1.27	0.89426	1.00000
RegenerationR3	-0.613	1.27	0.52591	0.86967
RegenerationR4	-0.478	1.27	0.61362	0.91834
RegenerationR5	1.07	1.27	0.30103	0.72821
RegenerationR6	0.024	1.27	0.99693	1.00000
RegenerationBL	-1.309	1.27	1.00000	1.00000
RegenerationTP	3.73	1.27	0.16408	0.59358

Genes with expression patterns similar to MligTC455_34546

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34546	34	0.72	Mlig455_033259	Neo: - Age: logFC(26M/2M)=-0.642	TNKS	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_033259 {REF} {Length: 4261} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=75.2]; Spectrin repeat [PF00435.23, score=33.4]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=62.4, Expect=2e-09]; ENSG00000285372, AC270292.3, tankyrase, [Score=62.4, Expect=2e-09]; ENSG00000107854, TNKS2, tankyrase 2, [Score=62.0, Expect=3e-09]; ENSG00000102699, PARP4, poly(ADP-ribose) polymerase family member 4, [Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=62.4, Expect=2e-09]; ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=62.0, Expect=2e-09]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=65.9, Expect=1e-10]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=59.7, Expect=5e-09]} {RNA1509_42623} {RNA1310_17668.1} {RNA815_15244}
2.	MligTC455_01681	7	0.15	Mlig455_006560	Neo: - Age: -		0.964	-	-	-	0.964	-	-	Mlig455_006560 {REF} {Length: 301} {NoTransDecoderORF}
3.	MligTC455_03679	12	0.24	Mlig455_065726	Neo: - Age: -		0.959	-	-	-	0.959	-	-	Mlig455_065726 {REF} {Length: 520} {NoTransDecoderORF} {RNA1509_35191} {RNA1310_132084} {RNA815_54684}
4.	MligTC455_30699	96	2.01	Mlig455_061110	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.897		0.954	-	-	-	0.954	-	-	Mlig455_061110 {REF} {Length: 3253} {Pfam: Fibronectin type III domain [PF00041.23, score=79.9]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=19.3]} {RNA1509_43854} {RNA1310_20229.1} {RNA815_718.1}
5.	MligTC455_32234	17	0.36	Mlig455_005702	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_005702 {REF} {Length: 810} {NoTransDecoderORF} {RNA1509_34199} {RNA1310_27268} {RNA815_5538}
6.	MligTC455_13557	20	0.43	Mlig455_020342, Mlig455_041283	Neo: - Age: -	ASIC1	0.953	-	-	-	0.953	-	-	Mlig455_020342 {REF} {Length: 4002} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=135.3]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=59.3, Expect=4e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=65.1, Expect=3e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=72.4, Expect=1e-13]} {RNA1509_33503} {RNA1310_41267.1} {RNA815_38083} Mlig455_041283 {REF} {Length: 3377} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=207.2]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=67.4, Expect=4e-11]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=60.1, Expect=7e-09]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=66.2, Expect=5e-11]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=112, Expect=8e-26]} {RNA1509_33503} {RNA1310_18874} {RNA815_38083}
7.	MligTC455_23926	9	0.19	Mlig455_020174	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_020174 {REF} {Length: 920} {Pfam: THAP domain [PF05485.14, score=27.7]} {RNA1509_42786} {RNA1310_55169} {RNA815_27173}
8.	MligTC455_39903	11	0.24	Mlig455_000444, Mlig455_000505	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_000444 {REF} {Length: 578} {NoTransDecoderORF} Mlig455_000505 {REF} {Length: 587} {NoTransDecoderORF}

Berezikov Lab - 2020-2021 © ERIBA