Data search
Results for MligTC455_34595
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34595 | 637 | 13.27 | Mlig455_057294, Mlig455_066467 | Neo: - Age: - |
Mlig455_057294 {REF} {Length: 4364} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1} Mlig455_066467 {REF} {Length: 378} {NoTransDecoderORF} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.3} |
Cumulative graph for MligTC455_34595
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.398 | 4.044 | 0.66373 | 1.00000 | |
| RegionR2 | -0.174 | 4.044 | 0.69099 | 1.00000 | |
| RegionR3 | -0.096 | 4.044 | 0.78284 | 1.00000 | |
| RegionR4 | 0.105 | 4.044 | 0.79380 | 1.00000 | |
| RegionR5 | -0.017 | 4.044 | 0.95926 | 1.00000 | |
| RegionR6 | 0.291 | 4.044 | 0.40575 | 0.97539 | |
| RegionR7 | 0.843 | 4.044 | 0.03927 | 0.37985 | |
| RegionR8 | -1.351 | 4.044 | 0.05270 | 0.44731 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.134 | 4.044 | 0.91969 | 1.00000 | |
| RegenerationR2 | -0.428 | 4.044 | 0.29765 | 0.73980 | |
| RegenerationR3 | -0.558 | 4.044 | 0.19250 | 0.62779 | |
| RegenerationR4 | 0.057 | 4.044 | 0.88933 | 1.00000 | |
| RegenerationR5 | 0.473 | 4.044 | 0.21061 | 0.64427 | |
| RegenerationR6 | -0.388 | 4.044 | 0.36416 | 0.70787 | |
| RegenerationBL | -0.045 | 4.044 | 0.93914 | 1.00000 | |
| RegenerationTP | 0.397 | 4.044 | 0.49611 | 0.89812 |
Genes with expression patterns similar to MligTC455_34595
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34595 | 637 | 13.27 | Mlig455_057294, Mlig455_066467 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057294 {REF} {Length: 4364} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1} Mlig455_066467 {REF} {Length: 378} {NoTransDecoderORF} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.3} |
|
| 2. | MligTC455_44984 | 885 | 18.43 | Mlig455_011032 | Neo: - Age: Up-Down-Up Region-enriched R5: 1.312/0.00044 |
USO1 | 1.818 | - | - | - | 0.867 | - | 0.951 | Mlig455_011032 {REF} {Length: 3902} {Pfam: Uso1 / p115 like vesicle tethering protein, head region [PF04869.16, score=138.8]; Armadillo tether-repeat of vescicular transport factor [PF18770.3, score=90.5]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=36.1]; Initiation control protein YabA [PF06156.15, score=23.8]; Homeobox associated leucine zipper [PF02183.20, score=20.5]} {Human: ENSG00000138768, USO1, USO1 vesicle transport factor, [RH, Score=624, Expect=0.0]} {Mouse: ENSMUSG00000029407, Uso1, USO1 vesicle docking factor, [RH, Score=642, Expect=0.0]} {Dmel: FBgn0040087, p115, [RH, Score=513, Expect=1e-168]} {Celegans: WBGene00010713, uso-1, USO1 (Yeast transport protein) homolog, [RH, Score=415, Expect=1e-130]} {Smed: dd_Smed_v6_7694_0_1, dd_Smed_v6_7694_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_4920} {RNA1310_5117.1} {RNA815_6241} |
| 3. | MligTC455_35872 | 276 | 5.76 | Mlig455_039093 | Neo: - Age: Up-Up-Down |
0.973 | - | - | - | 0.973 | - | - | Mlig455_039093 {REF} {Length: 2636} {Pfam: Homeodomain-like domain [PF13384.8, score=26.2]; Helix-turn-helix domain [PF13518.8, score=25.9]} {RNA1509_48694} {RNA1310_48256} {RNA815_5960} | |
| 4. | MligTC455_41275 | 384 | 8 | Mlig455_060364 | Neo: - Age: - |
RFK | 0.966 | - | - | - | - | - | 0.966 | Mlig455_060364 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: Riboflavin kinase [PF01687.19, score=92.9]} {Human: ENSG00000135002, RFK, riboflavin kinase, [RH, Score=58.9, Expect=9e-11]} {Mouse: ENSMUSG00000024712, Rfk, riboflavin kinase, [RH, Score=59.3, Expect=5e-11]} {RNA1509_26370} {RNA1310_18887, RNA1509_26370} {RNA1509_26370, RNA815_16418} |
| 5. | MligTC455_25468 | 835 | 17.4 | Mlig455_059894 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 1.400/0.01794 |
PNKP | 0.96 | - | - | - | - | - | 0.960 | Mlig455_059894 {REF} {Length: 3283} {Pfam: AAA domain [PF13671.8, score=41.5]; Chromatin associated protein KTI12 [PF08433.12, score=30.2]; Polynucleotide kinase 3 phosphatase [PF08645.13, score=24.0]; AAA ATPase domain [PF13191.8, score=23.8]} {Human: ENSG00000039650, PNKP, polynucleotide kinase 3'-phosphatase, [Score=144, Expect=2e-39]} {Mouse: ENSMUSG00000002963, Pnkp, polynucleotide kinase 3'- phosphatase, [Score=140, Expect=5e-38]} {Dmel: FBgn0037578, CG9601, [Score=132, Expect=7e-35]} {Celegans: WBGene00009010, F21D5.5, [Score=164, Expect=9e-48]} {Smed: dd_Smed_v6_1211_0_2, dd_Smed_v6_1211_0_2, [Score=146, Expect=9e-41]} {RNA1509_29141, RNA1509_38859} {RNA1310_5154.1, RNA1509_29141} {RNA1509_29141, RNA815_12031} |
| 6. | MligTC455_17302 | 189 | 3.93 | Mlig455_023962 | Neo: - Age: - |
TDG | 0.959 | - | - | - | 0.959 | - | - | Mlig455_023962 {REF} {Length: 4820} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=66.6]} {Human: ENSG00000139372, TDG, thymine DNA glycosylase, [RH, Score=208, Expect=6e-60]} {Mouse: ENSMUSG00000034674, Tdg, thymine DNA glycosylase, [RH, Score=208, Expect=4e-60]} {Dmel: FBgn0026869, Thd1, [Score=251, Expect=8e-71]} {Smed: dd_Smed_v6_9424_0_1, dd_Smed_v6_9424_0_1, [Score=318, Expect=3e-100]} {RNA1509_16155} {RNA1310_19396.1} {RNA815_15874} |
| 7. | MligTC455_39377 | 2992 | 62.33 | Mlig455_046114, Mlig455_046209 | Neo: - Age: logFC(26M/2M)=0.255 |
FUCA2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_046114 {REF} {Length: 2446} {TRANSSPLICED} {Pfam: Alpha-L-fucosidase [PF01120.19, score=415.7]; Alpha-L-fucosidase C-terminal domain [PF16757.7, score=71.4]} {Human: ENSG00000001036, FUCA2, alpha-L-fucosidase 2, [RH, Score=542, Expect=0.0]; ENSG00000179163, FUCA1, alpha-L-fucosidase 1, [RH, Score=520, Expect=0.0]} {Mouse: ENSMUSG00000019810, Fuca2, fucosidase, alpha-L- 2, plasma, [RH, Score=535, Expect=0.0]; ENSMUSG00000028673, Fuca1, fucosidase, alpha-L- 1, tissue, [RH, Score=517, Expect=0.0]} {Dmel: FBgn0285958, Fuca, alpha-L-fucosidase, [RH, Score=465, Expect=3e-161]} {Celegans: WBGene00012225, W03G11.3, Putative alpha-L-fucosidase, [RH, Score=424, Expect=4e-145]} {Smed: dd_Smed_v6_8422_0_1, dd_Smed_v6_8422_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_6158} {RNA1310_6463} {RNA815_1561} Mlig455_046209 {REF} {Length: 3321} {TRANSSPLICED} {Pfam: Alpha-L-fucosidase [PF01120.19, score=417.3]; Alpha-L-fucosidase C-terminal domain [PF16757.7, score=71.3]} {Human: ENSG00000001036, FUCA2, alpha-L-fucosidase 2, [RH, Score=537, Expect=0.0]; ENSG00000179163, FUCA1, alpha-L-fucosidase 1, [RH, Score=518, Expect=0.0]} {Mouse: ENSMUSG00000019810, Fuca2, fucosidase, alpha-L- 2, plasma, [RH, Score=530, Expect=0.0]; ENSMUSG00000028673, Fuca1, fucosidase, alpha-L- 1, tissue, [RH, Score=516, Expect=0.0]} {Dmel: FBgn0285958, Fuca, alpha-L-fucosidase, [RH, Score=466, Expect=1e-161]} {Celegans: WBGene00012225, W03G11.3, Putative alpha-L-fucosidase, [RH, Score=421, Expect=7e-144]} {Smed: dd_Smed_v6_8422_0_1, dd_Smed_v6_8422_0_1, [RH, Score=538, Expect=0.0]} {RNA1509_12330, RNA1509_16238, RNA1509_6158} {RNA1310_9914.1, RNA1509_12330, RNA1509_16238, RNA1509_6158} {RNA1509_12330, RNA1509_16238, RNA1509_6158, RNA815_1561} |
| 8. | MligTC455_25467 | 838 | 17.46 | Mlig455_019965, Mlig455_059888 | Neo: Irradiation Age: - Region-enriched R4: 1.383/0.01960 |
KREMEN1, PNKP | 0.958 | - | - | - | - | - | 0.958 | Mlig455_019965 {REF} {Length: 1025} {Pfam: WSC domain [PF01822.21, score=52.5]; PAN domain [PF00024.28, score=27.6]; MANEC domain [PF07502.16, score=20.3]; PAN domain [PF14295.8, score=18.7]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=53.9, Expect=5e-08]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=56.2, Expect=5e-09]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=46.2, Expect=9e-06]} {RNA1509_46267} {RNA1310_43993} {RNA815_32275.1} Mlig455_059888 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: Polynucleotide kinase 3 phosphatase [PF08645.13, score=157.7]; AAA domain [PF13671.8, score=39.5]; Chromatin associated protein KTI12 [PF08433.12, score=24.9]; AAA ATPase domain [PF13191.8, score=22.5]} {Human: ENSG00000039650, PNKP, polynucleotide kinase 3'-phosphatase, [RH, Score=296, Expect=9e-94]} {Mouse: ENSMUSG00000002963, Pnkp, polynucleotide kinase 3'- phosphatase, [RH, Score=281, Expect=3e-88]} {Dmel: FBgn0037578, CG9601, [RH, Score=290, Expect=2e-91]} {Celegans: WBGene00009010, F21D5.5, [RH, Score=300, Expect=5e-97]} {Smed: dd_Smed_v6_1211_0_1, dd_Smed_v6_1211_0_1, [RH, Score=274, Expect=2e-86]} {RNA1509_26104, RNA1509_4014} {RNA1310_9464, RNA1509_26104, RNA1509_4014} {RNA1509_26104, RNA1509_4014, RNA815_3236} |
| 9. | MligTC455_14474 | 4337 | 90.35 | Mlig455_040064 | Neo: - Age: - |
0.957 | - | - | - | 0.957 | - | - | Mlig455_040064 {REF} {Length: 567} {NoTransDecoderORF} {RNA1509_12533} {RNA1310_13559.1} {RNA815_5097.1} | |
| 10. | MligTC455_34976 | 1568 | 32.66 | Mlig455_037934 | Neo: - Age: - Region-enriched R5: 1.150/0.00097 |
EPN2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_037934 {REF} {Length: 4839} {TRANSSPLICED} {Pfam: ENTH domain [PF01417.22, score=158.4]; ANTH domain [PF07651.18, score=28.2]; VHS domain [PF00790.21, score=23.9]} {Human: ENSG00000072134, EPN2, epsin 2, [Score=309, Expect=5e-97]; ENSG00000063245, EPN1, epsin 1, [Score=304, Expect=5e-95]} {Mouse: ENSMUSG00000035203, Epn1, epsin 1, [Score=311, Expect=7e-98]} {Dmel: FBgn0028582, lqf, liquid facets, [RH, Score=283, Expect=5e-85]} {Celegans: WBGene00001329, epn-1, EPsiN (Endocytic protein) homolog, [Score=265, Expect=4e-82]} {Smed: dd_Smed_v6_4779_0_1, dd_Smed_v6_4779_0_1, [RH, Score=280, Expect=3e-86]} {RNA1509_10151} {RNA1310_15538, RNA1509_10151} {RNA1509_10151, RNA815_19613} |