Data search
Results for MligTC455_35872
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35872 | 276 | 5.76 | Mlig455_039093 | Neo: - Age: Up-Up-Down |
Mlig455_039093 {REF} {Length: 2636} {Pfam: Homeodomain-like domain [PF13384.8, score=26.2]; Helix-turn-helix domain [PF13518.8, score=25.9]} {RNA1509_48694} {RNA1310_48256} {RNA815_5960} |
Cumulative graph for MligTC455_35872
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.514 | 3.067 | 0.76651 | 1.00000 | |
| RegionR2 | 0.577 | 3.067 | 0.43655 | 0.82634 | |
| RegionR3 | 0.876 | 3.067 | 0.09921 | 0.55183 | |
| RegionR4 | -0.017 | 3.067 | 0.98924 | 1.00000 | |
| RegionR5 | 0.453 | 3.067 | 0.36501 | 0.71741 | |
| RegionR6 | 0.332 | 3.067 | 0.56330 | 1.00000 | |
| RegionR7 | 0.569 | 3.067 | 0.40428 | 1.00000 | |
| RegionR8 | -2.276 | 3.067 | 0.06126 | 0.48205 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.127 | 3.067 | 0.49438 | 1.00000 | |
| RegenerationR2 | 0.772 | 3.067 | 0.16478 | 0.60290 | |
| RegenerationR3 | 0.188 | 3.067 | 0.75428 | 0.96593 | |
| RegenerationR4 | 0.492 | 3.067 | 0.47203 | 0.85444 | |
| RegenerationR5 | 0.928 | 3.067 | 0.09920 | 0.48084 | |
| RegenerationR6 | -0.263 | 3.067 | 0.71474 | 0.93264 | |
| RegenerationBL | 0.151 | 3.067 | 0.89598 | 1.00000 | |
| RegenerationTP | 1.31 | 3.067 | 0.18497 | 0.62177 |
Genes with expression patterns similar to MligTC455_35872
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35872 | 276 | 5.76 | Mlig455_039093 | Neo: - Age: Up-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039093 {REF} {Length: 2636} {Pfam: Homeodomain-like domain [PF13384.8, score=26.2]; Helix-turn-helix domain [PF13518.8, score=25.9]} {RNA1509_48694} {RNA1310_48256} {RNA815_5960} | |
| 2. | MligTC455_17417 | 600 | 12.5 | Mlig455_032918 | Neo: - Age: - |
1.719 | - | 0.766 | - | - | 0.953 | - | Mlig455_032918 {REF} {Length: 2312} {TRANSSPLICED} {RNA1509_37148, RNA1509_51474} {RNA1310_10197.1, RNA1509_37148, RNA1509_51474} {RNA1509_37148, RNA1509_51474, RNA815_10351} | |
| 3. | MligTC455_34595 | 637 | 13.27 | Mlig455_057294, Mlig455_066467 | Neo: - Age: - |
0.973 | - | - | - | 0.973 | - | - | Mlig455_057294 {REF} {Length: 4364} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.1} Mlig455_066467 {REF} {Length: 378} {NoTransDecoderORF} {RNA1509_38400} {RNA1310_5895.2} {RNA815_1641.3} |
|
| 4. | MligTC455_48433 | 676 | 14.09 | Mlig455_031129 | Neo: - Age: - |
SSBP3 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_031129 {REF} {Length: 2160} {Human: ENSG00000157216, SSBP3, single stranded DNA binding protein 3, [RH, Score=179, Expect=9e-54]; ENSG00000145687, SSBP2, single stranded DNA binding protein 2, [RH, Score=179, Expect=9e-54]; ENSG00000130511, SSBP4, single stranded DNA binding protein 4, [RH, Score=173, Expect=1e-51]} {Mouse: ENSMUSG00000061887, Ssbp3, single-stranded DNA binding protein 3, [RH, Score=179, Expect=6e-54]; ENSMUSG00000003992, Ssbp2, single-stranded DNA binding protein 2, [RH, Score=178, Expect=6e-54]} {Dmel: FBgn0011481, Ssdp, Sequence-specific single-stranded DNA-binding protein, [Score=176, Expect=4e-52]} {Celegans: WBGene00012990, sam-10, Single-stranded DNA-binding protein homolog sam-10, [Score=81.6, Expect=2e-17]} {Smed: dd_Smed_v6_9129_0_1, dd_Smed_v6_9129_0_1, [Score=160, Expect=3e-46]} {RNA1509_12899, RNA1509_16601} {RNA1310_33434.1, RNA1509_12899, RNA1509_16601} {RNA1509_12899, RNA1509_16601, RNA815_35599} |
| 5. | MligTC455_44084 | 235 | 4.9 | Mlig455_011457 | Neo: - Age: - |
FLCN | 0.964 | - | - | - | - | - | 0.964 | Mlig455_011457 {REF} {Length: 5279} {TRANSSPLICED} {Pfam: Vesicle coat protein involved in Golgi to plasma membrane transport [PF11704.10, score=126.0]; Forkhead domain [PF00250.20, score=110.5]; Folliculin C-terminal domain [PF16692.7, score=107.0]} {Human: ENSG00000154803, FLCN, folliculin, [Score=209, Expect=1e-56]} {Mouse: ENSMUSG00000032633, Flcn, folliculin, [Score=208, Expect=1e-56]} {Dmel: FBgn0029504, CHES-1-like, Checkpoint suppressor 1-like, [RH, Score=139, Expect=1e-32]} {Celegans: WBGene00017699, flcn-1, F22D3.2 protein; FoLliCuliN, [RH, Score=97.1, Expect=3e-20]} {Smed: dd_Smed_v6_4329_0_2, dd_Smed_v6_4329_0_2, [Score=148, Expect=3e-37]} {RNA1509_11130, RNA1509_33195} {RNA1310_5404, RNA1509_33195} {RNA1509_33195, RNA815_1916} |
| 6. | MligTC455_28191 | 561 | 11.69 | Mlig455_071059 | Neo: - Age: Up-Down-Down |
ACRV1 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_071059 {REF} {Length: 7291} {Human: ENSG00000134940, ACRV1, acrosomal vesicle protein 1, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=91.7, Expect=6e-18]} {RNA1509_51272} {RNA1310_143.1} {RNA815_104.1} |
| 7. | MligTC455_32833 | 193 | 4.02 | Mlig455_011012 | Neo: - Age: logFC(26M/2M)=0.827 |
IFT52 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_011012 {REF} {Length: 4326} {TRANSSPLICED} {Pfam: RNA polymerase III transcription factor (TF)IIIC subunit HTH domain [PF09734.11, score=59.9]; Tau95 Triple barrel domain [PF17682.3, score=49.4]} {Human: ENSG00000101052, IFT52, intraflagellar transport 52, [Score=319, Expect=9e-102]} {Mouse: ENSMUSG00000017858, Ift52, intraflagellar transport 52, [Score=330, Expect=3e-106]} {Dmel: FBgn0031829, IFT52, Intraflagellar transport 52, [Score=171, Expect=6e-47]} {Celegans: WBGene00003886, osm-6, Osm-6 protein, [Score=218, Expect=1e-63]} {Smed: dd_Smed_v6_5043_0_1, dd_Smed_v6_5043_0_1, [Score=350, Expect=2e-114]} {RNA1509_8537} {RNA1310_16849} {RNA815_7203} |
| 8. | MligTC455_36298 | 186 | 3.88 | Mlig455_062519 | Neo: - Age: - |
0.957 | - | - | - | 0.957 | - | - | Mlig455_062519 {REF} {Length: 2799} {RNA1509_31201} {RNA1310_21195.1} {RNA815_15661.1} | |
| 9. | MligTC455_17302 | 189 | 3.93 | Mlig455_023962 | Neo: - Age: - |
TDG | 0.956 | - | - | - | 0.956 | - | - | Mlig455_023962 {REF} {Length: 4820} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=66.6]} {Human: ENSG00000139372, TDG, thymine DNA glycosylase, [RH, Score=208, Expect=6e-60]} {Mouse: ENSMUSG00000034674, Tdg, thymine DNA glycosylase, [RH, Score=208, Expect=4e-60]} {Dmel: FBgn0026869, Thd1, [Score=251, Expect=8e-71]} {Smed: dd_Smed_v6_9424_0_1, dd_Smed_v6_9424_0_1, [Score=318, Expect=3e-100]} {RNA1509_16155} {RNA1310_19396.1} {RNA815_15874} |
| 10. | MligTC455_09647 | 49 | 1.02 | Mlig455_001466 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_001466 {REF} {Length: 340} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_2201} {RNA815_38675} | |
| 11. | MligTC455_51803 | 1043 | 21.73 | Mlig455_039187 | Neo: - Age: logFC(26M/2M)=-0.692 |
CHMP5 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_039187 {REF} {Length: 1356} {Pfam: Snf7 [PF03357.23, score=180.2]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=20.0]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [RH, Score=292, Expect=1e-100]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [RH, Score=292, Expect=7e-101]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [RH, Score=278, Expect=2e-95]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=271, Expect=4e-93]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [RH, Score=342, Expect=3e-121]} {RNA1509_25388} {RNA1310_25926.1} {RNA815_8046} |
| 12. | MligTC455_52201 | 712 | 14.84 | Mlig455_000379 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.455 Region-enriched R4: 2.637/0.00000 Regeneration-downregulated R4: -1.839 Regeneration-depleted R4: -1.839 |
CHEK2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_000379 {REF} {Length: 2826} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=205.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=111.0]; FHA domain [PF00498.28, score=45.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.5]; Kinase-like [PF14531.8, score=19.4]; ABC1 atypical kinase-like domain [PF03109.18, score=19.2]} {Human: ENSG00000183765, CHEK2, checkpoint kinase 2, [Score=231, Expect=1e-67]} {Mouse: ENSMUSG00000029521, Chek2, checkpoint kinase 2, [Score=226, Expect=7e-66]} {Dmel: FBgn0019686, lok, loki, [Score=219, Expect=3e-64]} {Celegans: WBGene00000499, chk-2, Serine/threonine-protein kinase chk-2, [Score=174, Expect=1e-47]} {Smed: dd_Smed_v6_6620_0_1, dd_Smed_v6_6620_0_1, [Score=234, Expect=2e-70]} {RNA1509_3579} {RNA1310_6215, RNA1509_3579} {RNA1509_3579, RNA815_2071.1} |
| 13. | MligTC455_42356 | 167 | 3.48 | Mlig455_039463 | Neo: - Age: Up-Down-Down |
MEPCE | 0.95 | - | - | - | - | - | 0.950 | Mlig455_039463 {REF} {Length: 2698} {TRANSSPLICED} {Pfam: Bicoid-interacting protein 3 (Bin3) [PF06859.14, score=111.1]; Methyltransferase domain [PF13649.8, score=35.5]; Methyltransferase domain [PF08242.14, score=32.8]; Methyltransferase domain [PF13489.8, score=31.7]; Methyltransferase domain [PF13847.8, score=31.1]; Methyltransferase domain [PF08241.14, score=30.0]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=20.7]; Methyltransferase small domain [PF05175.16, score=20.1]} {Human: ENSG00000146834, MEPCE, methylphosphate capping enzyme, [Score=171, Expect=3e-45]} {Mouse: ENSMUSG00000029726, Mepce, methylphosphate capping enzyme, [Score=171, Expect=2e-45]} {Dmel: FBgn0037368, CG1239, [Score=145, Expect=3e-39]} {Celegans: WBGene00012469, Y17G7B.18, Probable RNA methyltransferase Y17G7B.18, [Score=162, Expect=2e-44]} {Smed: dd_Smed_v6_8153_0_1, dd_Smed_v6_8153_0_1, [RH, Score=125, Expect=4e-31]} {RNA1509_14163} {RNA1310_14404.2, RNA1509_14163} {RNA1509_14163, RNA815_5431} |
| 14. | MligTC455_50633 | 125 | 2.61 | Mlig455_005638 | Neo: - Age: - |
ENKD1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_005638 {REF} {Length: 2679} {TRANSSPLICED} {Pfam: Calmodulin-binding [PF13864.8, score=72.6]} {Human: ENSG00000124074, ENKD1, enkurin domain containing 1, [RH, Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000013155, Enkd1, enkurin domain containing 1, [RH, Score=117, Expect=6e-30]} {Dmel: FBgn0033174, CG11125, [RH, Score=70.5, Expect=3e-13]} {Smed: dd_Smed_v6_12339_0_1, dd_Smed_v6_12339_0_1, [RH, Score=177, Expect=1e-52]} {RNA1509_21917} {RNA1310_12437.2} {RNA815_12111} |
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