Data search
Results for MligTC455_34600
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34600 | 514 | 10.72 | Mlig455_038345 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.308/0.02774 |
DDX4 | Mlig455_038345 {REF} {Length: 3926} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=156.7]; Helicase conserved C-terminal domain [PF00271.33, score=90.6]; Zinc knuckle [PF00098.25, score=41.8]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=390, Expect=1e-122]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=383, Expect=3e-120]} {Dmel: FBgn0283442, vas, vasa, [Score=377, Expect=6e-119]} {Celegans: WBGene00001600, glh-3, ATP-dependent RNA helicase glh-3, [RH, Score=323, Expect=6e-98]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [RH, Score=421, Expect=1e-132]} {RNA1509_6594} {RNA1310_12916} {RNA815_5319.1} |
Cumulative graph for MligTC455_34600
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.081 | 3.956 | 0.95506 | 1.00000 | |
| RegionR2 | -0.667 | 3.956 | 0.35898 | 0.75370 | |
| RegionR3 | -0.069 | 3.956 | 0.90459 | 1.00000 | |
| RegionR4 | 1.037 | 3.956 | 0.08657 | 0.27925 | |
| RegionR5 | 1.308 | 3.956 | 0.00371 | 0.02774 | |
| RegionR6 | -0.316 | 3.956 | 0.57570 | 1.00000 | |
| RegionR7 | -0.326 | 3.956 | 0.66430 | 1.00000 | |
| RegionR8 | -0.886 | 3.956 | 0.39715 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.435 | 3.956 | 0.80507 | 1.00000 | |
| RegenerationR2 | 0.545 | 3.956 | 0.38059 | 0.80190 | |
| RegenerationR3 | 0.682 | 3.956 | 0.29058 | 0.72222 | |
| RegenerationR4 | -0.015 | 3.956 | 0.98007 | 1.00000 | |
| RegenerationR5 | -0.387 | 3.956 | 0.49752 | 0.85720 | |
| RegenerationR6 | 0.571 | 3.956 | 0.38539 | 0.72589 | |
| RegenerationBL | -0.257 | 3.956 | 0.77540 | 1.00000 | |
| RegenerationTP | 0.059 | 3.956 | 0.95165 | 1.00000 |
Genes with expression patterns similar to MligTC455_34600
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34600 | 514 | 10.72 | Mlig455_038345 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.308/0.02774 |
DDX4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_038345 {REF} {Length: 3926} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=156.7]; Helicase conserved C-terminal domain [PF00271.33, score=90.6]; Zinc knuckle [PF00098.25, score=41.8]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=390, Expect=1e-122]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=383, Expect=3e-120]} {Dmel: FBgn0283442, vas, vasa, [Score=377, Expect=6e-119]} {Celegans: WBGene00001600, glh-3, ATP-dependent RNA helicase glh-3, [RH, Score=323, Expect=6e-98]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [RH, Score=421, Expect=1e-132]} {RNA1509_6594} {RNA1310_12916} {RNA815_5319.1} |
| 2. | MligTC455_34601 | 457 | 9.53 | Mlig455_068282 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.449 Region-enriched R5: 1.270/0.04320 |
DDX4 | 5.929 | 0.997 | 0.986 | 0.988 | 0.968 | 0.996 | 0.994 | Mlig455_068282 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=89.3]; DEAD/DEAH box helicase [PF00270.31, score=61.6]; Zinc knuckle [PF00098.25, score=43.0]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=255, Expect=2e-74]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=256, Expect=7e-75]} {Dmel: FBgn0283442, vas, vasa, [Score=249, Expect=4e-73]} {Celegans: WBGene00006888, vbh-1, Vasa-and Belle-like Helicase, [Score=218, Expect=1e-61]} {Smed: dd_Smed_v6_1985_0_2, dd_Smed_v6_1985_0_2, [Score=265, Expect=2e-77]} {RNA1509_6594} {RNA1310_5999.3} {RNA815_5319.1} |
| 3. | MligTC455_25842 | 589 | 12.27 | Mlig455_023391, Mlig455_046308, Mlig455_054156, Mlig455_060696 | Neo: - Age: - Region-enriched R4: 3.466/0.00027 |
1.676 | - | - | 0.703 | 0.973 | - | - | Mlig455_023391 {REF} {Length: 290} {NoTransDecoderORF} {RNA1509_49085} Mlig455_046308 {REF} {Length: 197} {NoTransDecoderORF} {RNA1509_49085} Mlig455_054156 {REF} {Length: 3324} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=145.7]} {Dmel: FBgn0029893, CG14442, [RH, Score=50.4, Expect=6e-06]} {Celegans: WBGene00018020, F33H12.6, [Score=265, Expect=9e-75]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=73.6, Expect=2e-15]} {RNA1509_49085} {RNA1310_14584.1} {RNA815_44929} Mlig455_060696 {REF} {Length: 1072} {TRANSSPLICED} {RNA1509_49085} {RNA1310_14584.1} {RNA815_44929} |
|
| 4. | MligTC455_36081 | 1387 | 28.89 | Mlig455_040332 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.740 Region-enriched R3: 3.050/0.00000 |
0.971 | - | - | - | - | 0.971 | - | Mlig455_040332 {REF} {Length: 2953} {Pfam: Transforming growth factor beta like domain [PF00019.22, score=44.8]} {RNA1509_5434} {RNA1310_5336} {RNA815_1739.1} | |
| 5. | MligTC455_12291 | 205 | 4.28 | Mlig455_016878 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 5.701 Region-enriched R4: 2.586/0.03421 |
CSNK1D | 0.962 | - | - | - | 0.962 | - | - | Mlig455_016878 {REF} {Length: 3388} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=51.7]; Fungal protein kinase [PF17667.3, score=24.0]} {Human: ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=95.9, Expect=2e-20]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=95.1, Expect=3e-20]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=95.1, Expect=3e-20]; ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [Score=95.1, Expect=1e-20]; ENSG00000180138, CSNK1A1L, casein kinase 1 alpha 1 like, [Score=93.6, Expect=4e-20]} {Mouse: ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=95.5, Expect=2e-20]; ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=95.5, Expect=2e-20]; ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [Score=95.1, Expect=8e-21]} {Dmel: FBgn0032650, CG7094, [Score=92.0, Expect=1e-19]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=92.0, Expect=2e-20]} {Smed: dd_Smed_v6_4561_0_1, dd_Smed_v6_4561_0_1, [Score=102, Expect=7e-23]} {RNA1509_57548, RNA1509_7887} {RNA1310_10396, RNA1509_57548, RNA1509_7887} {RNA1509_57548, RNA1509_7887, RNA815_3389} |
| 6. | MligTC455_30405 | 15479 | 322.49 | Mlig455_010004, Mlig455_010049 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.566 Region-enriched R3: 3.633/0.00000 |
CPA2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_010004 {REF} {Length: 1499} {Pfam: Zinc carboxypeptidase [PF00246.26, score=261.4]} {Human: ENSG00000158516, CPA2, carboxypeptidase A2, [Score=221, Expect=5e-67]} {Mouse: ENSMUSG00000071553, Cpa2, carboxypeptidase A2, pancreatic, [Score=228, Expect=6e-70]} {Dmel: FBgn0032144, CG17633, [RH, Score=240, Expect=1e-74]} {Celegans: WBGene00020281, T06A4.1, [Score=214, Expect=3e-63]} {Smed: dd_Smed_v6_2541_0_1, dd_Smed_v6_2541_0_1, [RH, Score=257, Expect=2e-81]} {RNA1509_334, RNA1509_3364} {RNA1310_22015, RNA1509_334, RNA1509_3364} {RNA1509_334, RNA1509_3364, RNA815_8491} Mlig455_010049 {REF} {Length: 1546} {Pfam: Zinc carboxypeptidase [PF00246.26, score=261.1]} {Human: ENSG00000158516, CPA2, carboxypeptidase A2, [Score=220, Expect=2e-66]} {Mouse: ENSMUSG00000071553, Cpa2, carboxypeptidase A2, pancreatic, [Score=227, Expect=3e-69]} {Dmel: FBgn0032144, CG17633, [RH, Score=242, Expect=3e-75]} {Celegans: WBGene00020281, T06A4.1, [Score=215, Expect=2e-63]} {Smed: dd_Smed_v6_2541_0_1, dd_Smed_v6_2541_0_1, [RH, Score=257, Expect=3e-81]} {RNA1509_334} {RNA1310_22015} {RNA815_8491} |
| 7. | MligTC455_34505 | 332 | 6.92 | Mlig455_056584, Mlig455_056605 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.021/0.00055 |
SLBP | 0.958 | - | - | - | - | - | 0.958 | Mlig455_056584 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} Mlig455_056605 {REF} {Length: 2903} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} |
| 8. | MligTC455_11079 | 40 | 0.83 | Mlig455_053265 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_053265 {REF} {Length: 2494} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=19.2]} {RNA1509_59151} {RNA1310_53403} {RNA815_40035} | |
| 9. | MligTC455_07609 | 814 | 16.96 | Mlig455_065903, Mlig455_070028 | Neo: Germline Age: Up-Down-Down Region-specific R4: 3.357 Region-enriched R4: 2.291/0.00800 |
A1CF | 0.95 | - | - | - | 0.950 | - | - | Mlig455_065903 {REF} {Length: 4282} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=8e-146]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=3e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=5e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=445, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1} Mlig455_070028 {REF} {Length: 4546} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=1e-145]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=2e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=4e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=444, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1} |