Data search
Results for MligTC455_34601
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34601 | 457 | 9.53 | Mlig455_068282 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.449 Region-enriched R5: 1.270/0.04320 |
DDX4 | Mlig455_068282 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=89.3]; DEAD/DEAH box helicase [PF00270.31, score=61.6]; Zinc knuckle [PF00098.25, score=43.0]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=255, Expect=2e-74]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=256, Expect=7e-75]} {Dmel: FBgn0283442, vas, vasa, [Score=249, Expect=4e-73]} {Celegans: WBGene00006888, vbh-1, Vasa-and Belle-like Helicase, [Score=218, Expect=1e-61]} {Smed: dd_Smed_v6_1985_0_2, dd_Smed_v6_1985_0_2, [Score=265, Expect=2e-77]} {RNA1509_6594} {RNA1310_5999.3} {RNA815_5319.1} |
Cumulative graph for MligTC455_34601
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.211 | 3.82 | 0.89173 | 1.00000 | |
| RegionR2 | -0.697 | 3.82 | 0.36471 | 0.75914 | |
| RegionR3 | -0.123 | 3.82 | 0.83337 | 1.00000 | |
| RegionR4 | 1.11 | 3.82 | 0.08221 | 0.26969 | |
| RegionR5 | 1.27 | 3.82 | 0.00671 | 0.04320 | |
| RegionR6 | -0.502 | 3.82 | 0.39634 | 0.96933 | |
| RegionR7 | -0.28 | 3.82 | 0.72575 | 1.00000 | |
| RegionR8 | -0.566 | 3.82 | 0.60339 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.731 | 3.82 | 0.69969 | 1.00000 | |
| RegenerationR2 | 0.497 | 3.82 | 0.44181 | 0.84107 | |
| RegenerationR3 | 0.562 | 3.82 | 0.40749 | 0.80708 | |
| RegenerationR4 | -0.148 | 3.82 | 0.82041 | 0.99418 | |
| RegenerationR5 | -0.389 | 3.82 | 0.50734 | 0.86224 | |
| RegenerationR6 | 0.625 | 3.82 | 0.36753 | 0.71058 | |
| RegenerationBL | -0.496 | 3.82 | 0.61937 | 0.96235 | |
| RegenerationTP | -0.201 | 3.82 | 0.83573 | 1.00000 |
Genes with expression patterns similar to MligTC455_34601
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34601 | 457 | 9.53 | Mlig455_068282 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.449 Region-enriched R5: 1.270/0.04320 |
DDX4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_068282 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=89.3]; DEAD/DEAH box helicase [PF00270.31, score=61.6]; Zinc knuckle [PF00098.25, score=43.0]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=255, Expect=2e-74]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=256, Expect=7e-75]} {Dmel: FBgn0283442, vas, vasa, [Score=249, Expect=4e-73]} {Celegans: WBGene00006888, vbh-1, Vasa-and Belle-like Helicase, [Score=218, Expect=1e-61]} {Smed: dd_Smed_v6_1985_0_2, dd_Smed_v6_1985_0_2, [Score=265, Expect=2e-77]} {RNA1509_6594} {RNA1310_5999.3} {RNA815_5319.1} |
| 2. | MligTC455_34600 | 514 | 10.72 | Mlig455_038345 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.308/0.02774 |
DDX4 | 5.929 | 0.997 | 0.986 | 0.988 | 0.968 | 0.996 | 0.994 | Mlig455_038345 {REF} {Length: 3926} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=156.7]; Helicase conserved C-terminal domain [PF00271.33, score=90.6]; Zinc knuckle [PF00098.25, score=41.8]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=390, Expect=1e-122]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=383, Expect=3e-120]} {Dmel: FBgn0283442, vas, vasa, [Score=377, Expect=6e-119]} {Celegans: WBGene00001600, glh-3, ATP-dependent RNA helicase glh-3, [RH, Score=323, Expect=6e-98]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [RH, Score=421, Expect=1e-132]} {RNA1509_6594} {RNA1310_12916} {RNA815_5319.1} |
| 3. | MligTC455_30743 | 4753 | 99.02 | Mlig455_060907, Mlig455_069368 | Neo: S/G2/M, no gonads Age: Up-Up-Up, logFC(26M/2M)=1.235 Region-specific R5: 2.573 Region-enriched R5: 2.138/0.00000 Regeneration-upregulated BL: 1.987 Regeneration-enriched BL: 1.987 |
PIWIL1 | 2.613 | 0.848 | - | 0.806 | - | - | 0.959 | Mlig455_060907 {REF} {Length: 3829} {TRANSSPLICED} {Pfam: Piwi domain [PF02171.19, score=257.8]; PAZ domain [PF02170.24, score=99.2]; Argonaute linker 1 domain [PF08699.12, score=33.9]} {Human: ENSG00000125207, PIWIL1, piwi like RNA-mediated gene silencing 1, [RH, Score=573, Expect=0.0]; ENSG00000275051, PIWIL1, piwi like RNA-mediated gene silencing 1, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000029423, Piwil1, piwi-like RNA-mediated gene silencing 1, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0250816, AGO3, Argonaute 3, [RH, Score=518, Expect=1e-170]} {Celegans: WBGene00004178, prg-1, Piwi-like protein, [RH, Score=417, Expect=1e-132]} {Smed: dd_Smed_v6_1258_0_1, dd_Smed_v6_1258_0_1, [Score=496, Expect=3e-161]} {RNA1509_24273, RNA1509_26947, RNA1509_3900, RNA1509_39890, RNA1509_42423} {RNA1310_4826, RNA1509_24273, RNA1509_26947, RNA1509_39890, RNA1509_42423} {RNA1509_24273, RNA1509_26947, RNA1509_39890, RNA1509_42423, RNA815_813.1} Mlig455_069368 {REF} {Length: 3825} {TRANSSPLICED} {Pfam: Piwi domain [PF02171.19, score=257.8]; PAZ domain [PF02170.24, score=99.2]; Argonaute linker 1 domain [PF08699.12, score=33.9]} {Human: ENSG00000125207, PIWIL1, piwi like RNA-mediated gene silencing 1, [RH, Score=573, Expect=0.0]; ENSG00000275051, PIWIL1, piwi like RNA-mediated gene silencing 1, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000029423, Piwil1, piwi-like RNA-mediated gene silencing 1, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0250816, AGO3, Argonaute 3, [RH, Score=518, Expect=1e-170]} {Celegans: WBGene00004178, prg-1, Piwi-like protein, [RH, Score=417, Expect=1e-132]} {Smed: dd_Smed_v6_1258_0_1, dd_Smed_v6_1258_0_1, [Score=496, Expect=3e-161]} {RNA1509_3900} {RNA1310_4826} {RNA815_813.1} |
| 4. | MligTC455_36081 | 1387 | 28.89 | Mlig455_040332 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.740 Region-enriched R3: 3.050/0.00000 |
0.975 | - | - | - | - | 0.975 | - | Mlig455_040332 {REF} {Length: 2953} {Pfam: Transforming growth factor beta like domain [PF00019.22, score=44.8]} {RNA1509_5434} {RNA1310_5336} {RNA815_1739.1} | |
| 5. | MligTC455_34505 | 332 | 6.92 | Mlig455_056584, Mlig455_056605 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.021/0.00055 |
SLBP | 0.964 | - | - | - | - | - | 0.964 | Mlig455_056584 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} Mlig455_056605 {REF} {Length: 2903} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} |
| 6. | MligTC455_07609 | 814 | 16.96 | Mlig455_065903, Mlig455_070028 | Neo: Germline Age: Up-Down-Down Region-specific R4: 3.357 Region-enriched R4: 2.291/0.00800 |
A1CF | 0.952 | - | - | - | 0.952 | - | - | Mlig455_065903 {REF} {Length: 4282} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=8e-146]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=3e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=5e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=445, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1} Mlig455_070028 {REF} {Length: 4546} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=127.1]; RNA recognition motif [PF16367.7, score=20.9]} {Human: ENSG00000148584, A1CF, APOBEC1 complementation factor, [RH, Score=444, Expect=1e-145]} {Mouse: ENSMUSG00000052595, A1cf, APOBEC1 complementation factor, [RH, Score=432, Expect=2e-141]; ENSMUSG00000070780, Rbm47, RNA binding motif protein 47, [RH, Score=421, Expect=6e-138]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=332, Expect=4e-104]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=276, Expect=4e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [RH, Score=444, Expect=2e-145]} {RNA1509_3951} {RNA1310_4587} {RNA815_9492.1} |