M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_34648

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34648 7 0.14 Mlig455_056654

Neo: -

Age: -

 CASP7 Mlig455_056654 {REF} {Length: 2891} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.8]; Caspase domain [PF00656.24, score=56.7]; Ras family [PF00071.24, score=55.3]; Ankyrin repeat [PF00023.32, score=37.1]; Ankyrin repeats (many copies) [PF13857.8, score=36.4]; Ankyrin repeat [PF13606.8, score=28.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=25.6]; Ankyrin repeats (many copies) [PF13637.8, score=23.9]; 50S ribosome-binding GTPase [PF01926.25, score=19.0]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=91.7, Expect=3e-19]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=92.0, Expect=5e-20]} {Dmel: FBgn0020381, Dredd, Death related ced-3/Nedd2-like caspase, [Score=64.3, Expect=1e-10]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=53.1, Expect=6e-07]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [Score=80.1, Expect=1e-16]} {RNA1310_17851} {RNA815_30305}

Cumulative graph for MligTC455_34648

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_34648

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34648 7 0.14 Mlig455_056654

Neo: -

Age: -

 CASP7 2 - - 1.000 - - 1.000 Mlig455_056654 {REF} {Length: 2891} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.8]; Caspase domain [PF00656.24, score=56.7]; Ras family [PF00071.24, score=55.3]; Ankyrin repeat [PF00023.32, score=37.1]; Ankyrin repeats (many copies) [PF13857.8, score=36.4]; Ankyrin repeat [PF13606.8, score=28.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=25.6]; Ankyrin repeats (many copies) [PF13637.8, score=23.9]; 50S ribosome-binding GTPase [PF01926.25, score=19.0]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=91.7, Expect=3e-19]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=92.0, Expect=5e-20]} {Dmel: FBgn0020381, Dredd, Death related ced-3/Nedd2-like caspase, [Score=64.3, Expect=1e-10]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=53.1, Expect=6e-07]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [Score=80.1, Expect=1e-16]} {RNA1310_17851} {RNA815_30305}
2. MligTC455_42690 55 1.14 Mlig455_062132

Neo: -

Age: -

 1.785 - - 0.968 - - 0.817 Mlig455_062132 {REF} {Length: 4673} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.1]} {Smed: dd_Smed_v6_62893_0_1, dd_Smed_v6_62893_0_1, [RH, Score=47.8, Expect=3e-07]} {RNA1509_31503} {RNA1310_63439}
3. MligTC455_12489 22 0.45 Mlig455_004470

Neo: -

Age: -

 0.998 - - 0.998 - - - Mlig455_004470 {REF} {Length: 1368} {Pfam: Lectin C-type domain [PF00059.23, score=24.8]} {RNA1310_22051} {RNA815_28288}
4. MligTC455_53276 52 1.07 Mlig455_032898

Neo: -

Age: -

 0.994 - - 0.994 - - - Mlig455_032898 {REF} {Length: 473} {NoTransDecoderORF} {RNA1310_127585} {RNA815_54104}
5. MligTC455_33437 70 1.45 Mlig455_033674, Mlig455_048657, Mlig455_049709, Mlig455_061777, Mlig455_068130

Neo: -

Age: Down-Up-Down

 VEZF1 0.989 - - 0.989 - - -

Mlig455_033674 {REF} {Length: 5798} {Human: ENSG00000136451, VEZF1, vascular endothelial zinc finger 1, [Score=49.3, Expect=6e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=66.2, Expect=3e-11]} {RNA1509_12203} {RNA1310_718} {RNA815_9387}

Mlig455_048657 {REF} {Length: 665} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [RH, Score=65.5, Expect=6e-12]} {RNA1509_12203} {RNA1310_1239} {RNA815_1913}

Mlig455_049709 {REF} {Length: 1238} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [Score=56.2, Expect=6e-09]} {RNA1509_12203} {RNA1310_1239} {RNA815_1913}

Mlig455_061777 {REF} {Length: 3572} {Smed: dd_Smed_v6_18267_0_1, dd_Smed_v6_18267_0_1, [Score=56.2, Expect=6e-09]} {RNA1509_12203} {RNA1310_718} {RNA815_9387}

Mlig455_068130 {REF} {Length: 6373} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=58.5, Expect=9e-09]} {RNA1509_12203} {RNA1310_718} {RNA815_1913}
6. MligTC455_21236 54 1.12 Mlig455_022300

Neo: -

Age: -

 EFNB2 0.983 - - 0.983 - - - Mlig455_022300 {REF} {Length: 2080} {Pfam: Ephrin [PF00812.19, score=54.8]} {Human: ENSG00000125266, EFNB2, ephrin B2, [RH, Score=75.1, Expect=9e-15]} {Mouse: ENSMUSG00000001300, Efnb2, ephrin B2, [RH, Score=75.1, Expect=6e-15]} {Celegans: WBGene00001165, efn-4, Ephrin-4, [Score=49.7, Expect=1e-06]} {RNA1310_17193.1} {RNA815_6680}
7. MligTC455_20654 41 0.86 Mlig455_000707

Neo: -

Age: -

 0.98 - - 0.980 - - - Mlig455_000707 {REF} {Length: 842} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.1} {RNA815_36985}
8. MligTC455_40766 99 2.05 Mlig455_012729

Neo: -

Age: Down-Down-Up

 TP53I11 0.979 - - 0.979 - - - Mlig455_012729 {REF} {Length: 2823} {Pfam: Tumour protein p53-inducible protein 11 [PF14936.8, score=89.2]} {Human: ENSG00000175274, TP53I11, tumor protein p53 inducible protein 11, [Score=65.5, Expect=4e-13]} {Mouse: ENSMUSG00000068735, Trp53i11, transformation related protein 53 inducible protein 11, [Score=66.6, Expect=2e-13]} {Celegans: WBGene00021185, Y9C12A.1, [Score=67.0, Expect=2e-13]} {RNA1310_38478} {RNA815_33223}
9. MligTC455_22915 94 1.95 Mlig455_058987

Neo: -

Age: Up-Down-Up

 POMGNT1 0.977 - - 0.977 - - - Mlig455_058987 {REF} {Length: 2797} {Pfam: GNT-I family [PF03071.17, score=40.7]} {Human: ENSG00000085998, POMGNT1, protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-), [Score=107, Expect=2e-24]} {Mouse: ENSMUSG00000028700, Pomgnt1, protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase, [Score=109, Expect=2e-25]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=58.2, Expect=7e-09]} {Smed: dd_Smed_v6_17617_0_1, dd_Smed_v6_17617_0_1, [Score=80.1, Expect=5e-16]} {RNA1310_17377} {RNA815_13131}
10. MligTC455_26471 119 2.47 Mlig455_050266

Neo: Neoblast, stringent

Age: Up-Down-Down

 PUM3 0.977 - - 0.977 - - - Mlig455_050266 {REF} {Length: 4249} {TRANSSPLICED} {Pfam: CPL (NUC119) domain [PF08144.13, score=55.2]; Pumilio-family RNA binding repeat [PF00806.21, score=24.5]} {Human: ENSG00000080608, PUM3, pumilio RNA binding family member 3, [RH, Score=210, Expect=4e-58]} {Mouse: ENSMUSG00000041360, Pum3, pumilio RNA-binding family member 3, [RH, Score=217, Expect=9e-61]} {Dmel: FBgn0015527, peng, penguin, [RH, Score=127, Expect=4e-30]} {Celegans: WBGene00014165, puf-12, Pumilio domain-containing protein 12, [RH, Score=204, Expect=2e-55]} {Smed: dd_Smed_v6_7389_0_1, dd_Smed_v6_7389_0_1, [RH, Score=221, Expect=7e-63]} {RNA1509_8112} {RNA1310_6869.1} {RNA815_1829.1}
11. MligTC455_42559 17 0.36 Mlig455_064128

Neo: -

Age: -

 0.977 - - 0.977 - - - Mlig455_064128 {REF} {Length: 1837} {Pfam: Glycine rich protein [PF12810.9, score=23.2]} {RNA1310_112308} {RNA815_32418}
12. MligTC455_53586 32 0.66 Mlig455_061060

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_061060 {REF} {Length: 1466} {RNA1310_93934} {RNA815_37442}
13. MligTC455_33434 48 1 Mlig455_015085, Mlig455_047128

Neo: -

Age: -

 VEZF1 0.974 - - 0.974 - - -

Mlig455_015085 {REF} {Length: 2879} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=54.3, Expect=3e-07]} {RNA1509_12203} {RNA1310_1239} {RNA815_9387}

Mlig455_047128 {REF} {Length: 3786} {Human: ENSG00000136451, VEZF1, vascular endothelial zinc finger 1, [Score=51.6, Expect=3e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=82.4, Expect=2e-15]} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=60.8, Expect=2e-09]} {RNA1509_12203} {RNA1310_718} {RNA815_9387}
14. MligTC455_35635 125 2.6 Mlig455_007067, Mlig455_019355, Mlig455_024593, Mlig455_030605, Mlig455_057051, Mlig455_057883, Mlig455_062992

Neo: -

Age: -

Region-enriched R5: 2.259/0.03003

 0.973 - - 0.973 - - -

Mlig455_007067 {REF} {Length: 162} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_101589} {RNA815_41251}

Mlig455_019355 {REF} {Length: 853} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_28413.1} {RNA815_41251}

Mlig455_024593 {REF} {Length: 140} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_101589} {RNA815_41251}

Mlig455_030605 {REF} {Length: 526} {NoTransDecoderORF} {RNA1509_55040} {RNA1310_80769} {RNA815_41251}

Mlig455_057051 {REF} {Length: 1881} {Pfam: 7tm Chemosensory receptor [PF08395.14, score=23.1]} {RNA1509_45210} {RNA1310_80769} {RNA815_41251}

Mlig455_057883 {REF} {Length: 373} {RNA1509_55040} {RNA1310_80769} {RNA815_41251}

Mlig455_062992 {REF} {Length: 160} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_101589} {RNA815_41251}
15. MligTC455_07318 34 0.72 Mlig455_056720, Mlig455_060298

Neo: -

Age: -

Region-enriched R2: 11.278/0.00008

Regeneration-downregulated R2: -4.848

Regeneration-depleted R2: -4.848

 0.97 - - 0.970 - - -

Mlig455_056720 {REF} {Length: 2957} {RNA1310_123874} {RNA815_45268}

Mlig455_060298 {REF} {Length: 3078} {RNA1310_82897} {RNA815_45268}
16. MligTC455_29168 95 1.99 Mlig455_001005

Neo: -

Age: Up-Down-Down

Region-enriched R2: 3.838/0.04040

 DNAH5 0.97 - - 0.970 - - - Mlig455_001005 {REF} {Length: 14882} {Pfam: Dynein heavy chain, N-terminal region 1 [PF08385.14, score=578.4]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=466.5]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=431.3]; Dynein heavy chain C-terminal domain [PF18199.3, score=314.7]; P-loop containing dynein motor region D4 [PF12780.9, score=302.4]; ATP-binding dynein motor region [PF12781.9, score=290.8]; P-loop containing dynein motor region [PF12775.9, score=229.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=179.1]; Microtubule-binding stalk of dynein motor [PF12777.9, score=143.2]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=121.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=75.6]; Dynein heavy chain AAA lid domain [PF17852.3, score=70.7]; AAA+ lid domain [PF17857.3, score=60.9]; AAA ATPase domain [PF13191.8, score=22.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=21.4]; P-loop containing region of AAA domain [PF13555.8, score=20.3]} {Human: ENSG00000039139, DNAH5, dynein axonemal heavy chain 5, [RH, Score=6260, Expect=0.0]} {Mouse: ENSMUSG00000022262, Dnah5, dynein, axonemal, heavy chain 5, [RH, Score=6234, Expect=0.0]} {Dmel: FBgn0037726, CG9492, [RH, Score=5093, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1290, Expect=0.0]} {Smed: dd_Smed_v6_4569_0_1, dd_Smed_v6_4569_0_1, [RH, Score=6941, Expect=0.0]} {RNA1509_51275} {RNA1310_408, RNA1509_51275} {RNA1509_51275, RNA815_44.1}
17. MligTC455_17596 37 0.77 Mlig455_007172

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_007172 {REF} {Length: 1102} {RNA1509_49095} {RNA1310_50088} {RNA815_56889.1}
18. MligTC455_46404 36 0.74 Mlig455_031747

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_031747 {REF} {Length: 613} {TRANSSPLICED} {RNA1310_50941.2} {RNA815_26807}
19. MligTC455_51609 26 0.55 Mlig455_059418

Neo: -

Age: -

 FAAH 0.968 - - 0.968 - - - Mlig455_059418 {REF} {Length: 2674} {Pfam: Amidase [PF01425.23, score=256.5]} {Human: ENSG00000117480, FAAH, fatty acid amide hydrolase, [Score=243, Expect=7e-72]} {Mouse: ENSMUSG00000034171, Faah, fatty acid amide hydrolase, [Score=252, Expect=2e-75]} {Dmel: FBgn0037547, CG7910, [Score=103, Expect=4e-23]} {Celegans: WBGene00019068, faah-3, Fatty Acid Amide Hydrolase homolog, [Score=266, Expect=3e-81]} {Smed: dd_Smed_v6_3298_0_1, dd_Smed_v6_3298_0_1, [Score=358, Expect=3e-116]} {RNA1310_26916} {RNA815_54676}
20. MligTC455_36450 63 1.32 Mlig455_019216

Neo: -

Age: Down-Up-Down

 0.966 - - 0.966 - - - Mlig455_019216 {REF} {Length: 972} {RNA1509_36471} {RNA1310_4381} {RNA815_59293}
21. MligTC455_27673 123 2.56 Mlig455_041241, Mlig455_053095

Neo: -

Age: Up-Down-Up

 GLRA1, GLRA3 0.964 - - 0.964 - - -

Mlig455_041241 {REF} {Length: 4857} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=165.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=84.7]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=253, Expect=3e-78]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=249, Expect=9e-77]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=246, Expect=1e-75]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=246, Expect=7e-76]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=244, Expect=2e-74]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=243, Expect=1e-74]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=240, Expect=2e-73]} {Dmel: FBgn0024963, GluClalpha, [Score=256, Expect=1e-79]} {Celegans: WBGene00000233, avr-15, GluClalpha2B protein, [RH, Score=247, Expect=6e-76]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [RH, Score=440, Expect=1e-151]} {RNA1509_35986} {RNA1310_28655} {RNA815_20247}

Mlig455_053095 {REF} {Length: 4892} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=83.4]} {Human: ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=254, Expect=9e-79]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=251, Expect=1e-77]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=243, Expect=9e-75]} {Mouse: ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=248, Expect=9e-77]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=244, Expect=5e-75]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=242, Expect=4e-74]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=236, Expect=2e-72]} {Dmel: FBgn0024963, GluClalpha, [Score=257, Expect=4e-80]} {Celegans: WBGene00000233, avr-15, GluClalpha2B protein, [Score=252, Expect=3e-78]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=449, Expect=1e-155]} {RNA1509_54479} {RNA1310_56579} {RNA815_20247}
22. MligTC455_08109 18 0.38 Mlig455_022357

Neo: -

Age: -

 0.962 - - 0.962 - - - Mlig455_022357 {REF} {Length: 931} {Pfam: WSC domain [PF01822.21, score=61.2]; PAN domain [PF00024.28, score=19.9]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=2e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=47.8, Expect=2e-06]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.4, Expect=6e-08]} {RNA1509_43359} {RNA1310_78136} {RNA815_40547}
23. MligTC455_29631 82 1.71 Mlig455_032230

Neo: -

Age: -

Region-enriched R2: 3.629/0.04679

 TANC2 0.959 - - 0.959 - - - Mlig455_032230 {REF} {Length: 5809} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=51.2]; Ankyrin repeats (3 copies) [PF12796.9, score=49.3]; Mab-21 protein [PF03281.16, score=42.7]; Ankyrin repeats (many copies) [PF13857.8, score=40.0]; Ankyrin repeat [PF13606.8, score=36.0]; Ankyrin repeat [PF00023.32, score=30.3]} {Human: ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=68.6, Expect=4e-11]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=68.6, Expect=4e-11]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=63.9, Expect=6e-10]} {Celegans: WBGene00006490, kdin-1, KiDINs220 (Vertebrate scaffold protein) homolog, [Score=57.4, Expect=4e-08]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=59.7, Expect=7e-09]} {RNA1509_26281} {RNA1310_1764.1} {RNA815_5358.1}
24. MligTC455_36959 14 0.28 Mlig455_019348, Mlig455_019567, Mlig455_045238

Neo: -

Age: -

 AC243734.1 0.957 - - 0.957 - - -

Mlig455_019348 {REF} {Length: 1134}

Mlig455_019567 {REF} {Length: 1135}

Mlig455_045238 {REF} {Length: 1757} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=170.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.4]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=1e-73]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=244, Expect=1e-73]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=243, Expect=5e-73]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=233, Expect=3e-69]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=244, Expect=1e-73]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=235, Expect=2e-70]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=252, Expect=5e-76]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=234, Expect=1e-69]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=242, Expect=2e-72]} {RNA1310_104931} {RNA815_34654}
25. MligTC455_33976 14 0.29 Mlig455_046330, Mlig455_047555, Mlig455_069685

Neo: -

Age: -

 0.955 - - 0.955 - - -

Mlig455_046330 {REF} {Length: 210} {Mouse: ENSMUSG00000090546, Cdr1, cerebellar degeneration related antigen 1, [Score=69.3, Expect=2e-15]} {RNA1509_43825} {RNA1310_55270} {RNA815_45398}

Mlig455_047555 {REF} {Length: 1917} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=54.7]} {Mouse: ENSMUSG00000090546, Cdr1, cerebellar degeneration related antigen 1, [RH, Score=227, Expect=7e-69]} {RNA1509_43825} {RNA1310_55270, RNA1509_43825} {RNA1509_43825, RNA815_45398}

Mlig455_069685 {REF} {Length: 1553} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=50.9]} {Mouse: ENSMUSG00000090546, Cdr1, cerebellar degeneration related antigen 1, [RH, Score=223, Expect=3e-67]} {RNA1509_43825} {RNA1310_55270} {RNA815_45398}
26. MligTC455_51738 57 1.18 Mlig455_039607

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.824

 0.953 - - 0.953 - - - Mlig455_039607 {REF} {Length: 1855} {RNA1509_22511} {RNA1310_17812, RNA1509_22511} {RNA1509_22511, RNA815_28227}
27. MligTC455_14184 23 0.48 Mlig455_026684

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_026684 {REF} {Length: 674} {NoTransDecoderORF} {RNA1310_72508} {RNA815_40858}
28. MligTC455_22715 64 1.34 Mlig455_046933

Neo: -

Age: logFC(26M/2M)=-0.390

 0.952 - - 0.952 - - - Mlig455_046933 {REF} {Length: 3059} {RNA1509_25878, RNA1509_31234} {RNA1310_6954, RNA1509_25878, RNA1509_31234} {RNA1509_25878, RNA1509_31234, RNA815_8376.1}
29. MligTC455_23867 60 1.24 Mlig455_019756

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_019756 {REF} {Length: 345}
30. MligTC455_31200 118 2.45 Mlig455_042833

Neo: -

Age: -

 LRRC9 0.952 - - 0.952 - - - Mlig455_042833 {REF} {Length: 5520} {Pfam: Leucine-rich repeat [PF14580.8, score=159.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=147.5]; Leucine rich repeat [PF13855.8, score=112.3]} {Human: ENSG00000131951, LRRC9, leucine rich repeat containing 9, [Score=433, Expect=3e-128]} {Mouse: ENSMUSG00000021090, Lrrc9, leucine rich repeat containing 9, [RH, Score=638, Expect=0.0]} {Dmel: FBgn0028992, sds22, [Score=70.9, Expect=2e-12]} {Celegans: WBGene00020266, T05H4.3, [RH, Score=80.1, Expect=8e-15]} {Smed: dd_Smed_v6_14851_0_1, dd_Smed_v6_14851_0_1, [RH, Score=369, Expect=4e-108]} {RNA1509_22179} {RNA1310_1731} {RNA815_589.1}
31. MligTC455_47927 43 0.9 Mlig455_029720

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_029720 {REF} {Length: 2459} {RNA1509_35671} {RNA1310_75812} {RNA815_33002}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA