TomoSeq data search

Data search

Results for MligTC455_34651

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34651

1301

27.11

Mlig455_035703, Mlig455_035710, Mlig455_035796

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.206

CHL1

Mlig455_035703 {REF} {Length: 737} {TRANSSPLICED} {RNA1509_2725} {RNA1310_5628} {RNA815_931}

Mlig455_035710 {REF} {Length: 5088} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=65.8]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=52.8, Expect=3e-06]} {Mouse: ENSMUSG00000030077, Chl1, cell adhesion molecule L1-like, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_7836_0_1, dd_Smed_v6_7836_0_1, [RH, Score=66.2, Expect=5e-11]} {RNA1509_2725} {RNA1310_3355.2} {RNA815_931}

Mlig455_035796 {REF} {Length: 5092} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=65.8]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=52.8, Expect=3e-06]} {Mouse: ENSMUSG00000030077, Chl1, cell adhesion molecule L1-like, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_7836_0_1, dd_Smed_v6_7836_0_1, [RH, Score=66.2, Expect=5e-11]} {RNA1509_2725, RNA1509_49694} {RNA1310_3355.2, RNA1509_2725, RNA1509_49694} {RNA1509_2725, RNA1509_49694, RNA815_931}

Cumulative graph for MligTC455_34651

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.9	5	0.30854	0.95791
RegionR2	0.578	5	0.16050	0.50116
RegionR3	-0.136	5	0.68626	1.00000
RegionR4	0.203	5	0.60183	0.91458
RegionR5	0.752	5	0.00956	0.05578
RegionR6	0.717	5	0.02536	0.29021
RegionR7	-0.268	5	0.52024	1.00000
RegionR8	-0.946	5	0.08635	0.55656

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.284	5	0.26957	0.97333
RegenerationR2	-0.018	5	0.95977	1.00000
RegenerationR3	0.243	5	0.54990	0.88348
RegenerationR4	-0.102	5	0.80294	0.98730
RegenerationR5	-0.122	5	0.73607	0.96664
RegenerationR6	-0.27	5	0.48916	0.79855
RegenerationBL	0.317	5	0.49287	0.85780
RegenerationTP	1.316	5	0.00549	0.12460

Genes with expression patterns similar to MligTC455_34651

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34651	1301	27.11	Mlig455_035703, Mlig455_035710, Mlig455_035796	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.206	CHL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035703 {REF} {Length: 737} {TRANSSPLICED} {RNA1509_2725} {RNA1310_5628} {RNA815_931} Mlig455_035710 {REF} {Length: 5088} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=65.8]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=52.8, Expect=3e-06]} {Mouse: ENSMUSG00000030077, Chl1, cell adhesion molecule L1-like, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_7836_0_1, dd_Smed_v6_7836_0_1, [RH, Score=66.2, Expect=5e-11]} {RNA1509_2725} {RNA1310_3355.2} {RNA815_931} Mlig455_035796 {REF} {Length: 5092} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=65.8]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=52.8, Expect=3e-06]} {Mouse: ENSMUSG00000030077, Chl1, cell adhesion molecule L1-like, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_7836_0_1, dd_Smed_v6_7836_0_1, [RH, Score=66.2, Expect=5e-11]} {RNA1509_2725, RNA1509_49694} {RNA1310_3355.2, RNA1509_2725, RNA1509_49694} {RNA1509_2725, RNA1509_49694, RNA815_931}
2.	MligTC455_34650	798	16.63	Mlig455_035705	Neo: - Age: logFC(26M/2M)=0.830		5.846	0.961	0.978	0.967	0.979	0.980	0.981	Mlig455_035705 {REF} {Length: 1600} {NoTransDecoderORF} {RNA1509_35950} {RNA1310_33147} {RNA815_25277.1}
3.	MligTC455_51553	420	8.74	Mlig455_015044	Neo: - Age: -	DDAH1	2.486	-	-	0.777	0.759	-	0.950	Mlig455_015044 {REF} {Length: 3170} {Pfam: N,N dimethylarginine dimethylhydrolase, eukaryotic [PF19420.1, score=30.0]; Arginine deiminase [PF02274.19, score=20.6]} {Human: ENSG00000153904, DDAH1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=145, Expect=2e-41]} {Mouse: ENSMUSG00000028194, Ddah1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=137, Expect=2e-38]} {Dmel: FBgn0030467, CG1764, [Score=169, Expect=3e-51]} {Smed: dd_Smed_v6_1460_0_1, dd_Smed_v6_1460_0_1, [RH, Score=299, Expect=3e-102]} {RNA1509_20449} {RNA1310_30475} {RNA815_13738}
4.	MligTC455_32617	508	10.59	Mlig455_066291	Neo: - Age: -	ZCCHC7	0.954	-	-	-	-	0.954	-	Mlig455_066291 {REF} {Length: 2773} {TRANSSPLICED} {Human: ENSG00000147905, ZCCHC7, zinc finger CCHC-type containing 7, [RH, Score=73.6, Expect=5e-13]} {Mouse: ENSMUSG00000035649, Zcchc7, zinc finger, CCHC domain containing 7, [RH, Score=73.9, Expect=3e-13]} {Dmel: FBgn0036668, Zcchc7, Zinc finger CCHC-type containing 7, [RH, Score=77.4, Expect=4e-14]} {Smed: dd_Smed_v6_13094_0_1, dd_Smed_v6_13094_0_1, [RH, Score=119, Expect=6e-28]} {RNA1509_13002} {RNA1310_7329} {RNA815_2068}
5.	MligTC455_50922	765	15.94	Mlig455_025280	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.985	NELFE	0.953	-	-	-	-	0.953	-	Mlig455_025280 {REF} {Length: 1330} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.4]} {Human: ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692} {RNA1310_22114} {RNA815_11055}
6.	MligTC455_50923	766	15.95	Mlig455_025309	Neo: - Age: -	NELFE	0.953	-	-	-	-	0.953	-	Mlig455_025309 {REF} {Length: 1328} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.4]} {Human: ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692, RNA1509_30004} {RNA1310_22114, RNA1509_13692, RNA1509_30004} {RNA1509_13692, RNA1509_30004, RNA815_11055}
7.	MligTC455_35384	1354	28.21	Mlig455_017265	Neo: Irradiation Age: -	MPPED1	0.952	-	-	-	0.952	-	-	Mlig455_017265 {REF} {Length: 2106} {Human: ENSG00000186732, MPPED1, metallophosphoesterase domain containing 1, [Score=72.8, Expect=7e-14]; ENSG00000066382, MPPED2, metallophosphoesterase domain containing 2, [Score=72.4, Expect=5e-14]} {Mouse: ENSMUSG00000016386, Mpped2, metallophosphoesterase domain containing 2, [Score=72.8, Expect=3e-14]; ENSMUSG00000041708, Mpped1, metallophosphoesterase domain containing 1, [Score=72.8, Expect=4e-14]} {Celegans: WBGene00019479, K07C11.7, UPF0046 protein K07C11.7, [Score=70.9, Expect=7e-14]} {Smed: dd_Smed_v6_9610_0_1, dd_Smed_v6_9610_0_1, [RH, Score=129, Expect=3e-35]} {RNA1509_31891, RNA1509_35651, RNA1509_55357, RNA1509_8395} {RNA1310_9507, RNA1509_31891, RNA1509_35651, RNA1509_55357, RNA1509_8395} {RNA1509_31891, RNA1509_35651, RNA1509_55357, RNA1509_8395, RNA815_4279.2}

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