TomoSeq data search

Data search

Results for MligTC455_50922

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50922

765

15.94

Mlig455_025280

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.985

NELFE

Mlig455_025280 {REF} {Length: 1330} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.4]} {Human: ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692} {RNA1310_22114} {RNA815_11055}

Cumulative graph for MligTC455_50922

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.414	4.255	0.68815	1.00000
RegionR2	-0.122	4.255	0.80928	1.00000
RegionR3	-0.098	4.255	0.81240	1.00000
RegionR4	0.823	4.255	0.06629	0.23331
RegionR5	0.085	4.255	0.81853	1.00000
RegionR6	-0.21	4.255	0.61722	1.00000
RegionR7	-0.222	4.255	0.68012	1.00000
RegionR8	0.159	4.255	0.80011	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.011	4.255	0.39697	1.00000
RegenerationR2	0.12	4.255	0.77886	0.98290
RegenerationR3	0.28	4.255	0.55511	0.88617
RegenerationR4	-0.605	4.255	0.20110	0.64712
RegenerationR5	0.171	4.255	0.69694	0.95054
RegenerationR6	0.67	4.255	0.15546	0.48205
RegenerationBL	0.01	4.255	0.98577	1.00000
RegenerationTP	-0.704	4.255	0.26458	0.71243

Genes with expression patterns similar to MligTC455_50922

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50922	765	15.94	Mlig455_025280	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.985	NELFE	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025280 {REF} {Length: 1330} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.4]} {Human: ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692} {RNA1310_22114} {RNA815_11055}
2.	MligTC455_50923	766	15.95	Mlig455_025309	Neo: - Age: -	NELFE	5.998	1.000	1.000	1.000	0.999	1.000	0.999	Mlig455_025309 {REF} {Length: 1328} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.4]} {Human: ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692, RNA1509_30004} {RNA1310_22114, RNA1509_13692, RNA1509_30004} {RNA1509_13692, RNA1509_30004, RNA815_11055}
3.	MligTC455_36349	620	12.92	Mlig455_047722	Neo: Int S/G2/M Age: Down-Up-Down		1.695	-	-	-	0.734	0.961	-	Mlig455_047722 {REF} {Length: 1825} {TRANSSPLICED} {Pfam: Ribosomal subunit 39S [PF10501.11, score=23.7]} {Dmel: FBgn0028648, mRpL50, mitochondrial ribosomal protein L50, [RH, Score=69.3, Expect=4e-14]} {RNA1509_18923} {RNA1310_19223} {RNA815_10005.2}
4.	MligTC455_23244	640	13.33	Mlig455_015918	Neo: - Age: -		1.682	-	-	-	0.732	0.950	-	Mlig455_015918 {REF} {Length: 3667} {TRANSSPLICED} {RNA1509_31275, RNA1509_58259} {RNA1310_25623, RNA1509_58259} {RNA1509_58259, RNA815_11247}
5.	MligTC455_23996	352	7.33	Mlig455_048703, Mlig455_069752	Neo: - Age: logFC(26M/2M)=-0.321 Regeneration-upregulated R6: 2.385 Regeneration-enriched R6: 2.385	FBXW5	0.963	-	-	-	-	0.963	-	Mlig455_048703 {REF} {Length: 4783} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=77.0]} {RNA1509_26789} {RNA1310_15916} {RNA815_6066} Mlig455_069752 {REF} {Length: 6134} {Pfam: Las1-like [PF04031.15, score=76.4]; WD domain, G-beta repeat [PF00400.34, score=28.6]} {Human: ENSG00000159069, FBXW5, F-box and WD repeat domain containing 5, [Score=99.0, Expect=4e-21]} {Mouse: ENSMUSG00000015095, Fbxw5, F-box and WD-40 domain protein 5, [Score=97.8, Expect=7e-21]} {Dmel: FBgn0031773, Fbw5, F-box and WD repeat domain containing 5, [Score=120, Expect=3e-28]} {RNA1509_48790} {RNA1310_10269.1} {RNA815_6066}
6.	MligTC455_19255	867	18.07	Mlig455_010980	Neo: - Age: - Region-enriched R4: 1.104/0.02462	ALG5	0.958	-	-	-	-	0.958	-	Mlig455_010980 {REF} {Length: 3842} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=76.5]; Glycosyltransferase like family 2 [PF13641.8, score=44.8]} {Human: ENSG00000120697, ALG5, ALG5, dolichyl-phosphate beta-glucosyltransferase, [RH, Score=348, Expect=1e-119]} {Mouse: ENSMUSG00000036632, Alg5, asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase), [RH, Score=341, Expect=7e-117]} {Dmel: FBgn0261020, wol, wollknaeuel, [RH, Score=345, Expect=1e-118]} {Celegans: WBGene00019276, H43I07.3, [RH, Score=257, Expect=5e-84]} {Smed: dd_Smed_v6_6846_0_1, dd_Smed_v6_6846_0_1, [RH, Score=377, Expect=3e-131]} {RNA1509_14049, RNA1509_20200, RNA1509_25286, RNA1509_31726, RNA1509_39100, RNA1509_47377, RNA1509_55689} {RNA1310_25497, RNA1509_14049, RNA1509_20200, RNA1509_25286, RNA1509_31726, RNA1509_39100, RNA1509_47377, RNA1509_55689} {RNA1509_14049, RNA1509_20200, RNA1509_25286, RNA1509_31726, RNA1509_39100, RNA1509_47377, RNA1509_55689, RNA815_832.1}
7.	MligTC455_47682	372	7.75	Mlig455_000868	Neo: - Age: -	PGGT1B	0.954	-	-	-	-	0.954	-	Mlig455_000868 {REF} {Length: 3564} {TRANSSPLICED} {Pfam: Prenyltransferase and squalene oxidase repeat [PF00432.23, score=89.5]} {Human: ENSG00000164219, PGGT1B, protein geranylgeranyltransferase type I subunit beta, [RH, Score=265, Expect=3e-82]} {Mouse: ENSMUSG00000024477, Pggt1b, protein geranylgeranyltransferase type I, beta subunit, [RH, Score=264, Expect=3e-82]} {Dmel: FBgn0015000, betaggt-I, beta subunit of type I geranylgeranyl transferase, [RH, Score=223, Expect=1e-66]} {Celegans: WBGene00013002, Y48E1B.3, [RH, Score=213, Expect=2e-63]} {Smed: dd_Smed_v6_4004_0_1, dd_Smed_v6_4004_0_1, [RH, Score=298, Expect=9e-96]} {RNA1509_27906, RNA1509_39302} {RNA1310_12509.1, RNA1509_27906, RNA1509_39302} {RNA1509_27906, RNA1509_39302, RNA815_10411}
8.	MligTC455_34651	1301	27.11	Mlig455_035703, Mlig455_035710, Mlig455_035796	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.206	CHL1	0.953	-	-	-	-	0.953	-	Mlig455_035703 {REF} {Length: 737} {TRANSSPLICED} {RNA1509_2725} {RNA1310_5628} {RNA815_931} Mlig455_035710 {REF} {Length: 5088} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=65.8]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=52.8, Expect=3e-06]} {Mouse: ENSMUSG00000030077, Chl1, cell adhesion molecule L1-like, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_7836_0_1, dd_Smed_v6_7836_0_1, [RH, Score=66.2, Expect=5e-11]} {RNA1509_2725} {RNA1310_3355.2} {RNA815_931} Mlig455_035796 {REF} {Length: 5092} {TRANSSPLICED} {Pfam: Bravo-like intracellular region [PF13882.8, score=65.8]} {Human: ENSG00000134121, CHL1, cell adhesion molecule L1 like, [Score=52.8, Expect=3e-06]} {Mouse: ENSMUSG00000030077, Chl1, cell adhesion molecule L1-like, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_7836_0_1, dd_Smed_v6_7836_0_1, [RH, Score=66.2, Expect=5e-11]} {RNA1509_2725, RNA1509_49694} {RNA1310_3355.2, RNA1509_2725, RNA1509_49694} {RNA1509_2725, RNA1509_49694, RNA815_931}
9.	MligTC455_37707	171	3.57	Mlig455_044283	Neo: - Age: Down-Down-Up		0.953	-	-	-	-	0.953	-	Mlig455_044283 {REF} {Length: 1689} {NoTransDecoderORF} {RNA1310_12774.2} {RNA815_37521}
10.	MligTC455_39910	1511	31.47	Mlig455_069679	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.340 Region-enriched R5: 1.150/0.00002	CLNS1A	0.952	-	-	-	-	0.952	-	Mlig455_069679 {REF} {Length: 763} {TRANSSPLICED} {Pfam: Regulator of volume decrease after cellular swelling [PF03517.15, score=27.0]} {Human: ENSG00000074201, CLNS1A, chloride nucleotide-sensitive channel 1A, [Score=50.4, Expect=2e-07]} {Mouse: ENSMUSG00000025439, Clns1a, chloride channel, nucleotide-sensitive, 1A, [Score=52.0, Expect=5e-08]} {RNA1509_34637} {RNA1310_161.3} {RNA815_15486}
11.	MligTC455_50548	651	13.56	Mlig455_039553, Mlig455_051358	Neo: - Age: logFC(26M/2M)=0.261	MRI1	0.952	-	-	-	-	0.952	-	Mlig455_039553 {REF} {Length: 2475} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=256.7]} {Human: ENSG00000037757, MRI1, methylthioribose-1-phosphate isomerase 1, [RH, Score=364, Expect=2e-124]} {Mouse: ENSMUSG00000004996, Mri1, methylthioribose-1-phosphate isomerase 1, [RH, Score=355, Expect=5e-121]} {Dmel: FBgn0039849, CG11334, [RH, Score=379, Expect=1e-130]} {Celegans: WBGene00007236, C01G10.9, Methylthioribose-1-phosphate isomerase, [RH, Score=268, Expect=3e-87]} {RNA1509_13437, RNA1509_22125} {RNA1310_17445.2, RNA1509_22125} {RNA1509_22125, RNA815_10627.1} Mlig455_051358 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=257.4]} {Human: ENSG00000037757, MRI1, methylthioribose-1-phosphate isomerase 1, [RH, Score=367, Expect=1e-125]} {Mouse: ENSMUSG00000004996, Mri1, methylthioribose-1-phosphate isomerase 1, [RH, Score=358, Expect=4e-122]} {Dmel: FBgn0039849, CG11334, [RH, Score=380, Expect=3e-131]} {Celegans: WBGene00007236, C01G10.9, Methylthioribose-1-phosphate isomerase, [RH, Score=270, Expect=6e-88]} {RNA1509_13437} {RNA1310_17445.2, RNA1509_13437} {RNA1509_13437, RNA815_10627.1}
12.	MligTC455_32617	508	10.59	Mlig455_066291	Neo: - Age: -	ZCCHC7	0.951	-	-	-	-	0.951	-	Mlig455_066291 {REF} {Length: 2773} {TRANSSPLICED} {Human: ENSG00000147905, ZCCHC7, zinc finger CCHC-type containing 7, [RH, Score=73.6, Expect=5e-13]} {Mouse: ENSMUSG00000035649, Zcchc7, zinc finger, CCHC domain containing 7, [RH, Score=73.9, Expect=3e-13]} {Dmel: FBgn0036668, Zcchc7, Zinc finger CCHC-type containing 7, [RH, Score=77.4, Expect=4e-14]} {Smed: dd_Smed_v6_13094_0_1, dd_Smed_v6_13094_0_1, [RH, Score=119, Expect=6e-28]} {RNA1509_13002} {RNA1310_7329} {RNA815_2068}
13.	MligTC455_35806	1417	29.52	Mlig455_035965, Mlig455_051774	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_035965 {REF} {Length: 7256} {RNA1509_15166, RNA1509_33590} {RNA1310_147.2, RNA1509_33590} {RNA1509_33590, RNA815_1840.1} Mlig455_051774 {REF} {Length: 9316} {TRANSSPLICED} {RNA1509_15166, RNA1509_2589, RNA1509_7770} {RNA1310_147.2, RNA1509_15166, RNA1509_2589, RNA1509_7770} {RNA1509_15166, RNA1509_2589, RNA1509_7770, RNA815_1840.1}

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