Data search
Results for MligTC455_34699
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34699 | 581 | 12.11 | Mlig455_009215 | Neo: - Age: - |
HGD | Mlig455_009215 {REF} {Length: 2257} {TRANSSPLICED} {Pfam: homogentisate 1,2-dioxygenase [PF04209.15, score=713.2]} {Human: ENSG00000113924, HGD, homogentisate 1,2-dioxygenase, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000022821, Hgd, homogentisate 1, 2-dioxygenase, [RH, Score=621, Expect=0.0]} {Dmel: FBgn0040211, hgo, homogentisate 1,2-dioxygenase, [RH, Score=637, Expect=0.0]} {Celegans: WBGene00001843, hgo-1, Homogentisate 1,2-dioxygenase, [RH, Score=613, Expect=0.0]} {Smed: dd_Smed_v6_2908_0_1, dd_Smed_v6_2908_0_1, [RH, Score=586, Expect=0.0]} {RNA1509_15283, RNA1509_46787} {RNA1310_18945, RNA1509_46787} {RNA1509_46787, RNA815_2326} |
Cumulative graph for MligTC455_34699
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.107 | 3.991 | 0.28853 | 0.94106 | |
| RegionR2 | -0.825 | 3.991 | 0.06836 | 0.31784 | |
| RegionR3 | 0.38 | 3.991 | 0.25236 | 0.79652 | |
| RegionR4 | 1.123 | 3.991 | 0.01119 | 0.06653 | |
| RegionR5 | 0.271 | 3.991 | 0.38743 | 0.74298 | |
| RegionR6 | 0.238 | 3.991 | 0.50075 | 1.00000 | |
| RegionR7 | -1.568 | 3.991 | 0.00704 | 0.13836 | |
| RegionR8 | -0.726 | 3.991 | 0.24601 | 0.86321 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.397 | 3.991 | 0.37986 | 1.00000 | |
| RegenerationR2 | -0.307 | 3.991 | 0.41705 | 0.82545 | |
| RegenerationR3 | -0.334 | 3.991 | 0.38564 | 0.79342 | |
| RegenerationR4 | -0.294 | 3.991 | 0.47551 | 0.85627 | |
| RegenerationR5 | 0.31 | 3.991 | 0.39119 | 0.79326 | |
| RegenerationR6 | 0.308 | 3.991 | 0.42558 | 0.75513 | |
| RegenerationBL | 0.307 | 3.991 | 0.59470 | 0.94342 | |
| RegenerationTP | 0.213 | 3.991 | 0.74175 | 1.00000 |
Genes with expression patterns similar to MligTC455_34699
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34699 | 581 | 12.11 | Mlig455_009215 | Neo: - Age: - |
HGD | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009215 {REF} {Length: 2257} {TRANSSPLICED} {Pfam: homogentisate 1,2-dioxygenase [PF04209.15, score=713.2]} {Human: ENSG00000113924, HGD, homogentisate 1,2-dioxygenase, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000022821, Hgd, homogentisate 1, 2-dioxygenase, [RH, Score=621, Expect=0.0]} {Dmel: FBgn0040211, hgo, homogentisate 1,2-dioxygenase, [RH, Score=637, Expect=0.0]} {Celegans: WBGene00001843, hgo-1, Homogentisate 1,2-dioxygenase, [RH, Score=613, Expect=0.0]} {Smed: dd_Smed_v6_2908_0_1, dd_Smed_v6_2908_0_1, [RH, Score=586, Expect=0.0]} {RNA1509_15283, RNA1509_46787} {RNA1310_18945, RNA1509_46787} {RNA1509_46787, RNA815_2326} |
| 2. | MligTC455_44225 | 1069 | 22.28 | Mlig455_015063 | Neo: - Age: Up-Up-Down |
CORO1B | 2.449 | 0.753 | - | - | 0.741 | - | 0.955 | Mlig455_015063 {REF} {Length: 3367} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.7]; WD domain, G-beta repeat [PF00400.34, score=24.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=20.7]; Initiation control protein YabA [PF06156.15, score=19.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=493, Expect=5e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=486, Expect=2e-167]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=474, Expect=5e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=2e-170]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=2e-170]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=480, Expect=2e-165]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=473, Expect=2e-162]} {Dmel: FBgn0265935, coro, [RH, Score=481, Expect=2e-165]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=397, Expect=2e-132]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_39223} {RNA1310_30364} {RNA815_20610.1} |
| 3. | MligTC455_44226 | 2103 | 43.81 | Mlig455_015182, Mlig455_027144 | Neo: - Age: Up-Up-Down |
CORO1B | 1.701 | - | - | - | 0.750 | - | 0.951 | Mlig455_015182 {REF} {Length: 3501} {Pfam: Initiation control protein YabA [PF06156.15, score=21.1]; Cell division protein ZapB [PF06005.14, score=20.2]} {RNA1509_15548} {RNA1310_30364} {RNA815_20610.1} Mlig455_027144 {REF} {Length: 3431} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=110.7]; Type of WD40 repeat [PF16300.7, score=70.7]; WD domain, G-beta repeat [PF00400.34, score=24.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.4]} {Human: ENSG00000172725, CORO1B, coronin 1B, [RH, Score=492, Expect=7e-170]; ENSG00000167549, CORO6, coronin 6, [RH, Score=485, Expect=2e-167]; ENSG00000110880, CORO1C, coronin 1C, [RH, Score=474, Expect=6e-163]} {Mouse: ENSMUSG00000024835, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=3e-170]; ENSMUSG00000097771, Coro1b, coronin, actin binding protein 1B, [RH, Score=493, Expect=3e-170]; ENSMUSG00000020836, Coro6, coronin 6, [RH, Score=480, Expect=2e-165]; ENSMUSG00000004530, Coro1c, coronin, actin binding protein 1C, [RH, Score=472, Expect=2e-162]} {Dmel: FBgn0265935, coro, [RH, Score=481, Expect=3e-165]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [RH, Score=396, Expect=6e-132]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [RH, Score=523, Expect=0.0]} {RNA1509_15548} {RNA1310_30364} {RNA815_26523} |
| 4. | MligTC455_36992 | 201 | 4.19 | Mlig455_050341 | Neo: - Age: - |
CACNA1C | 1.691 | - | - | 0.952 | - | - | 0.739 | Mlig455_050341 {REF} {Length: 5549} {Pfam: Ion transport protein [PF00520.33, score=234.7]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=43.2]; Polycystin cation channel [PF08016.14, score=42.8]} {Human: ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=450, Expect=3e-143]; ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=450, Expect=3e-143]; ENSG00000102001, CACNA1F, calcium voltage-gated channel subunit alpha1 F, [Score=430, Expect=1e-136]} {Mouse: ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [Score=449, Expect=2e-143]; ENSMUSG00000026407, Cacna1s, calcium channel, voltage-dependent, L type, alpha 1S subunit, [Score=429, Expect=1e-136]; ENSMUSG00000031142, Cacna1f, calcium channel, voltage-dependent, alpha 1F subunit, [Score=429, Expect=2e-136]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=488, Expect=2e-158]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=455, Expect=2e-146]} {Smed: dd_Smed_v6_8899_0_14, dd_Smed_v6_8899_0_14, [Score=484, Expect=2e-156]} {RNA1509_27071} {RNA1310_14430.1} {RNA815_298.1} |
| 5. | MligTC455_24435 | 863 | 17.98 | Mlig455_027142 | Neo: Irradiation Age: logFC(26M/2M)=0.217 Region-enriched R5: 1.478/0.00000 |
ATIC | 1.672 | 0.716 | - | - | 0.956 | - | - | Mlig455_027142 {REF} {Length: 2892} {TRANSSPLICED} {Pfam: AICARFT/IMPCHase bienzyme [PF01808.20, score=290.3]; MGS-like domain [PF02142.24, score=74.9]} {Human: ENSG00000138363, ATIC, 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000026192, Atic, 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase, [RH, Score=670, Expect=0.0]} {Dmel: FBgn0039241, CG11089, [RH, Score=690, Expect=0.0]} {Celegans: WBGene00016957, atic-1, 5-Aminoimidazole-4-carboxamide ribonucleotide formylTransferase/IMP Cyclohydrolase homolog, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_3445_0_1, dd_Smed_v6_3445_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_6261} {RNA1310_7712.1, RNA1509_6261} {RNA1509_6261, RNA815_2690.1} |
| 6. | MligTC455_43744 | 1183 | 24.64 | Mlig455_067248 | Neo: - Age: - |
AASS | 0.98 | - | - | - | 0.980 | - | - | Mlig455_067248 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=73.9]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [Score=147, Expect=1e-38]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [Score=155, Expect=2e-40]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [Score=157, Expect=2e-41]} {Celegans: WBGene00019819, R02D3.1, [Score=154, Expect=2e-40]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [Score=148, Expect=1e-38]} {RNA1509_8607} {RNA1310_22407.1} {RNA815_16220} |
| 7. | MligTC455_47306 | 392 | 8.17 | Mlig455_064905 | Neo: - Age: Down-Down-Up |
PNPO | 0.979 | - | - | - | - | - | 0.979 | Mlig455_064905 {REF} {Length: 1535} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=86.5]; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region [PF10590.11, score=67.1]; Pyridoxamine 5'-phosphate oxidase [PF12766.9, score=29.1]} {Human: ENSG00000108439, PNPO, pyridoxamine 5'-phosphate oxidase, [RH, Score=192, Expect=2e-60]} {Mouse: ENSMUSG00000018659, Pnpo, pyridoxine 5'-phosphate oxidase, [RH, Score=191, Expect=4e-60]} {Dmel: FBgn0051472, sgll, sugarlethal, [RH, Score=184, Expect=9e-58]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=181, Expect=7e-57]} {Smed: dd_Smed_v6_5086_0_1, dd_Smed_v6_5086_0_1, [RH, Score=182, Expect=2e-57]} {RNA1509_3472} {RNA1310_16067} {RNA815_7134} |
| 8. | MligTC455_47692 | 358 | 7.46 | Mlig455_004798 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.250/0.00667 |
0.962 | - | - | - | 0.962 | - | - | Mlig455_004798 {REF} {Length: 1270} {NoTransDecoderORF} {RNA1509_31836} {RNA1310_47389, RNA1509_31836} {RNA1509_31836, RNA815_23742} |
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