TomoSeq data search

Data search

Results for MligTC455_34960

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34960

4038

84.12

Mlig455_049318

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.316

RPS11

Mlig455_049318 {REF} {Length: 629} {TRANSSPLICED} {Pfam: Ribosomal protein S17 [PF00366.22, score=96.7]; Ribosomal_S17 N-terminal [PF16205.7, score=86.3]} {Human: ENSG00000142534, RPS11, ribosomal protein S11, [RH, Score=223, Expect=3e-75]} {Mouse: ENSMUSG00000003429, Rps11, ribosomal protein S11, [RH, Score=223, Expect=2e-75]} {Dmel: FBgn0033699, RpS11, Ribosomal protein S11, [RH, Score=207, Expect=2e-69]} {Celegans: WBGene00004480, rps-11, Ribosomal Protein, Small subunit, [RH, Score=191, Expect=4e-63]} {Smed: dd_Smed_v6_227_0_1, dd_Smed_v6_227_0_1, [RH, Score=204, Expect=2e-68]} {RNA1509_4800} {RNA1310_56042, RNA1509_4800} {RNA1509_4800, RNA815_25311.1}

Cumulative graph for MligTC455_34960

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.17	6.557	0.12985	0.72735
RegionR2	0.503	6.557	0.36598	0.76048
RegionR3	0.538	6.557	0.27567	0.82027
RegionR4	-0.581	6.557	0.29835	0.61054
RegionR5	0.156	6.557	0.74768	1.00000
RegionR6	0.115	6.557	0.81592	1.00000
RegionR7	0.576	6.557	0.21391	0.83021
RegionR8	-0.136	6.557	0.80180	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.563	6.557	0.58482	1.00000
RegenerationR2	-1.383	6.557	0.02840	0.27876
RegenerationR3	-0.835	6.557	0.18319	0.61914
RegenerationR4	-0.509	6.557	0.42602	0.82874
RegenerationR5	-0.832	6.557	0.18559	0.61596
RegenerationR6	-0.777	6.557	0.22823	0.57372
RegenerationBL	-0.864	6.557	0.13880	0.44418
RegenerationTP	-0.257	6.557	0.66923	0.99946

Genes with expression patterns similar to MligTC455_34960

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34960	4038	84.12	Mlig455_049318	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.316	RPS11	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049318 {REF} {Length: 629} {TRANSSPLICED} {Pfam: Ribosomal protein S17 [PF00366.22, score=96.7]; Ribosomal_S17 N-terminal [PF16205.7, score=86.3]} {Human: ENSG00000142534, RPS11, ribosomal protein S11, [RH, Score=223, Expect=3e-75]} {Mouse: ENSMUSG00000003429, Rps11, ribosomal protein S11, [RH, Score=223, Expect=2e-75]} {Dmel: FBgn0033699, RpS11, Ribosomal protein S11, [RH, Score=207, Expect=2e-69]} {Celegans: WBGene00004480, rps-11, Ribosomal Protein, Small subunit, [RH, Score=191, Expect=4e-63]} {Smed: dd_Smed_v6_227_0_1, dd_Smed_v6_227_0_1, [RH, Score=204, Expect=2e-68]} {RNA1509_4800} {RNA1310_56042, RNA1509_4800} {RNA1509_4800, RNA815_25311.1}
2.	MligTC455_36837	9734	202.79	Mlig455_053790	Neo: - Age: logFC(26M/2M)=0.399	RPLP1	2.526	-	0.778	-	0.797	0.951	-	Mlig455_053790 {REF} {Length: 520} {TRANSSPLICED} {Pfam: 60s Acidic ribosomal protein [PF00428.21, score=89.2]} {Human: ENSG00000137818, RPLP1, ribosomal protein lateral stalk subunit P1, [RH, Score=85.1, Expect=5e-22]} {Mouse: ENSMUSG00000007892, Rplp1, ribosomal protein, large, P1, [RH, Score=84.0, Expect=9e-22]; ENSMUSG00000060019, Gm10073, predicted pseudogene 10073, [RH, Score=80.9, Expect=1e-20]} {Dmel: FBgn0002593, RpLP1, Ribosomal protein LP1, [Score=101, Expect=7e-29]} {Celegans: WBGene00004409, rla-1, 60S acidic ribosomal protein P1, [Score=84.7, Expect=2e-22]} {Smed: dd_Smed_v6_224_0_1, dd_Smed_v6_224_0_1, [Score=67.4, Expect=8e-16]} {RNA1509_7253} {RNA1310_72886} {RNA815_36874.1}
3.	MligTC455_21078	32	0.67	Mlig455_002675	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_002675 {REF} {Length: 3968} {NoTransDecoderORF} {RNA1509_49659} {RNA1310_88461} {RNA815_62212}
4.	MligTC455_47978	338	7.05	Mlig455_029027	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.509		0.956	-	-	-	-	0.956	-	Mlig455_029027 {REF} {Length: 2509} {RNA1509_33577, RNA1509_55410} {RNA1310_26945, RNA1509_33577, RNA1509_55410} {RNA1509_33577, RNA1509_55410, RNA815_10135.1}
5.	MligTC455_34493	34	0.7	Mlig455_027249	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_027249 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_58452} {RNA1310_61663} {RNA815_17924.3}
6.	MligTC455_22981	3111	64.8	Mlig455_054246	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_054246 {REF} {Length: 3052} {RNA1509_13841, RNA1509_14538, RNA1509_2253, RNA1509_26575, RNA1509_47864} {RNA1310_8881.1, RNA1509_14538, RNA1509_2253, RNA1509_26575, RNA1509_47864} {RNA1509_14538, RNA1509_2253, RNA1509_26575, RNA1509_47864, RNA815_8834}
7.	MligTC455_31448	183	3.82	Mlig455_033834	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_033834 {REF} {Length: 2859} {RNA1509_53217} {RNA1310_59954.1} {RNA815_36681.1}
8.	MligTC455_34300	321	6.69	Mlig455_069740	Neo: - Age: -	MAP1LC3C	0.95	-	-	-	-	0.950	-	Mlig455_069740 {REF} {Length: 6277} {TRANSSPLICED} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=133.5]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=23.3]} {Human: ENSG00000197769, MAP1LC3C, microtubule associated protein 1 light chain 3 gamma, [RH, Score=163, Expect=6e-51]} {Mouse: ENSMUSG00000031812, Map1lc3b, microtubule-associated protein 1 light chain 3 beta, [RH, Score=139, Expect=4e-42]; ENSMUSG00000027602, Map1lc3a, microtubule-associated protein 1 light chain 3 alpha, [RH, Score=137, Expect=3e-41]} {Dmel: FBgn0038539, Atg8b, Autophagy-related 8b, [Score=94.0, Expect=2e-24]} {Celegans: WBGene00002981, lgg-2, [RH, Score=113, Expect=8e-32]} {Smed: dd_Smed_v6_600_0_1, dd_Smed_v6_600_0_1, [Score=99.0, Expect=1e-26]} {RNA1509_20885, RNA1509_38607} {RNA1310_29628, RNA1509_20885, RNA1509_38607} {RNA1509_20885, RNA1509_38607, RNA815_23701}

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