Data search
Results for MligTC455_34970
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34970 | 764 | 15.92 | Mlig455_046892 | Neo: - Age: Down-Up-Up Regeneration-upregulated BL: 1.959 Regeneration-enriched BL: 1.959 |
GFI1 | Mlig455_046892 {REF} {Length: 2890} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=37.3]; C2H2-type zinc finger [PF13894.8, score=29.8]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=74.7, Expect=9e-14]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=74.7, Expect=2e-14]; ENSG00000171448, ZBTB26, zinc finger and BTB domain containing 26, [Score=73.6, Expect=2e-13]; ENSG00000081386, ZNF510, zinc finger protein 510, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=75.9, Expect=3e-14]; ENSMUSG00000064194, Zfp936, zinc finger protein 936, [Score=75.1, Expect=4e-14]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=75.1, Expect=3e-14]; ENSMUSG00000050714, Zbtb26, zinc finger and BTB domain containing 26, [Score=74.7, Expect=6e-14]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=83.2, Expect=1e-16]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.5, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=178, Expect=4e-50]} {RNA1509_13553, RNA1509_53524} {RNA1310_12376, RNA1509_13553, RNA1509_53524} {RNA1509_13553, RNA1509_53524, RNA815_12046} |
Cumulative graph for MligTC455_34970
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.03 | 4.134 | 0.45418 | 1.00000 | |
| RegionR2 | 0.666 | 4.134 | 0.16688 | 0.51151 | |
| RegionR3 | 0.313 | 4.134 | 0.45843 | 0.96825 | |
| RegionR4 | 0.23 | 4.134 | 0.60501 | 0.91717 | |
| RegionR5 | -0.722 | 4.134 | 0.11097 | 0.32750 | |
| RegionR6 | 0.427 | 4.134 | 0.31781 | 0.90634 | |
| RegionR7 | 1.077 | 4.134 | 0.03754 | 0.37076 | |
| RegionR8 | -0.961 | 4.134 | 0.31604 | 0.94884 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.767 | 4.134 | 0.65985 | 1.00000 | |
| RegenerationR2 | 0.844 | 4.134 | 0.01068 | 0.16730 | |
| RegenerationR3 | 0.673 | 4.134 | 0.08861 | 0.48209 | |
| RegenerationR4 | 0.38 | 4.134 | 0.33340 | 0.76716 | |
| RegenerationR5 | 1.311 | 4.134 | 0.00085 | 0.04854 | |
| RegenerationR6 | 0.487 | 4.134 | 0.22798 | 0.57346 | |
| RegenerationBL | 1.959 | 4.134 | 0.00001 | 0.00054 | Specific for BL: 1.959 |
| RegenerationTP | 0.416 | 4.134 | 0.52633 | 0.91776 |
Genes with expression patterns similar to MligTC455_34970
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34970 | 764 | 15.92 | Mlig455_046892 | Neo: - Age: Down-Up-Up Regeneration-upregulated BL: 1.959 Regeneration-enriched BL: 1.959 |
GFI1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046892 {REF} {Length: 2890} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=37.3]; C2H2-type zinc finger [PF13894.8, score=29.8]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=74.7, Expect=9e-14]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=74.7, Expect=2e-14]; ENSG00000171448, ZBTB26, zinc finger and BTB domain containing 26, [Score=73.6, Expect=2e-13]; ENSG00000081386, ZNF510, zinc finger protein 510, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=75.9, Expect=3e-14]; ENSMUSG00000064194, Zfp936, zinc finger protein 936, [Score=75.1, Expect=4e-14]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=75.1, Expect=3e-14]; ENSMUSG00000050714, Zbtb26, zinc finger and BTB domain containing 26, [Score=74.7, Expect=6e-14]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=83.2, Expect=1e-16]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.5, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=178, Expect=4e-50]} {RNA1509_13553, RNA1509_53524} {RNA1310_12376, RNA1509_13553, RNA1509_53524} {RNA1509_13553, RNA1509_53524, RNA815_12046} |
| 2. | MligTC455_40009 | 465 | 9.69 | Mlig455_007292, Mlig455_007306 | Neo: - Age: - Region-enriched R2: 1.847/0.04615 |
C12orf56 | 1.77 | - | 0.819 | - | - | 0.951 | - | Mlig455_007292 {REF} {Length: 3480} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.8]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.4, Expect=6e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=48.9, Expect=1e-05]} {RNA1509_59782} {RNA1310_13327.1} {RNA815_13535} Mlig455_007306 {REF} {Length: 3500} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.6]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.8, Expect=5e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=49.3, Expect=8e-06]} {RNA1509_56187, RNA1509_59782} {RNA1310_13327.1, RNA1509_56187, RNA1509_59782} {RNA1509_56187, RNA1509_59782, RNA815_13535} |
| 3. | MligTC455_52960 | 2270 | 47.28 | Mlig455_013223, Mlig455_013250, Mlig455_013318 | Neo: - Age: - |
SLC38A10 | 1.739 | - | - | - | 0.779 | - | 0.960 | Mlig455_013223 {REF} {Length: 1995} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=163.9]; Tryptophan/tyrosine permease family [PF03222.15, score=28.2]} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [Score=244, Expect=1e-71]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [Score=247, Expect=3e-71]} {Dmel: FBgn0050394, CG30394, [Score=213, Expect=2e-60]} {Celegans: WBGene00021765, Y51F10.4, [Score=180, Expect=8e-50]} {Smed: dd_Smed_v6_11525_0_1, dd_Smed_v6_11525_0_1, [Score=203, Expect=4e-60]} {RNA1509_15934} {RNA1310_24099, RNA1509_15934} {RNA1509_15934, RNA815_5073.1} Mlig455_013250 {REF} {Length: 1771} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=88.7]} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [Score=126, Expect=1e-30]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [Score=130, Expect=3e-32]} {Dmel: FBgn0050394, CG30394, [Score=133, Expect=2e-33]} {Celegans: WBGene00021765, Y51F10.4, [Score=98.2, Expect=8e-22]} {Smed: dd_Smed_v6_11525_0_1, dd_Smed_v6_11525_0_1, [Score=117, Expect=6e-29]} {RNA1509_15934} {RNA1310_28648.1} {RNA815_5073.1} Mlig455_013318 {REF} {Length: 1970} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=164.1]; Tryptophan/tyrosine permease family [PF03222.15, score=28.7]} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [Score=244, Expect=9e-72]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [Score=246, Expect=4e-71]} {Dmel: FBgn0050394, CG30394, [Score=213, Expect=2e-60]} {Celegans: WBGene00021765, Y51F10.4, [Score=180, Expect=7e-50]} {Smed: dd_Smed_v6_11525_0_1, dd_Smed_v6_11525_0_1, [Score=204, Expect=3e-60]} {RNA1509_15934} {RNA1310_24099} {RNA815_5073.1} |
| 4. | MligTC455_53283 | 448 | 9.33 | Mlig455_028537 | Neo: - Age: - |
1.731 | - | - | - | - | 0.983 | 0.748 | Mlig455_028537 {REF} {Length: 3137} {RNA1509_24485} {RNA1310_17001} {RNA815_22384} | |
| 5. | MligTC455_17303 | 318 | 6.62 | Mlig455_068164 | Neo: - Age: - |
TDG | 1.712 | - | - | - | 0.957 | 0.755 | - | Mlig455_068164 {REF} {Length: 7284} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=132.9]} {Human: ENSG00000139372, TDG, thymine DNA glycosylase, [RH, Score=206, Expect=2e-57]} {Mouse: ENSMUSG00000034674, Tdg, thymine DNA glycosylase, [RH, Score=208, Expect=2e-58]} {Dmel: FBgn0026869, Thd1, [Score=253, Expect=7e-68]} {Smed: dd_Smed_v6_9424_0_1, dd_Smed_v6_9424_0_1, [Score=324, Expect=2e-97]} {RNA1509_28066} {RNA1310_15535} {RNA815_10224} |
| 6. | MligTC455_18697 | 281 | 5.85 | Mlig455_009060 | Neo: - Age: Down-Up-Down |
NEK11 | 1.711 | - | - | - | 0.756 | 0.955 | - | Mlig455_009060 {REF} {Length: 2783} {Pfam: Protein kinase domain [PF00069.27, score=137.6]; Ankyrin repeats (3 copies) [PF12796.9, score=97.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.3]; Ankyrin repeats (many copies) [PF13637.8, score=60.3]; Ankyrin repeat [PF13606.8, score=54.3]; Ankyrin repeat [PF00023.32, score=53.5]; Ankyrin repeats (many copies) [PF13857.8, score=43.8]; Kinase-like [PF14531.8, score=20.0]} {Human: ENSG00000114670, NEK11, NIMA related kinase 11, [Score=151, Expect=8e-39]} {Mouse: ENSMUSG00000035032, Nek11, NIMA (never in mitosis gene a)-related expressed kinase 11, [Score=145, Expect=3e-36]} {Dmel: FBgn0036896, wnd, wallenda, [Score=97.4, Expect=1e-20]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=108, Expect=4e-24]} {Smed: dd_Smed_v6_10144_0_4, dd_Smed_v6_10144_0_4, [Score=119, Expect=1e-27]} {RNA1310_7330.1} {RNA815_3574} |
| 7. | MligTC455_53284 | 343 | 7.15 | Mlig455_064727 | Neo: - |
0.976 | - | - | - | - | 0.976 | - | Mlig455_064727 {REF} {Length: 2835} {RNA1509_31205} {RNA1310_25522.1, RNA1509_31205} {RNA1509_31205, RNA815_22384} | |
| 8. | MligTC455_23172 | 493 | 10.27 | Mlig455_005040 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.433 Region-enriched R6: 1.479/0.02831 |
GRIA2 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_005040 {REF} {Length: 2083} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=85.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=68.8]; Ligand-gated ion channel [PF00060.28, score=65.0]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=145, Expect=7e-37]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=139, Expect=7e-35]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=145, Expect=5e-37]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=139, Expect=6e-35]} {Dmel: FBgn0038837, CG3822, [Score=119, Expect=2e-28]} {Celegans: WBGene00001617, glr-6, GLutamate Receptor family (AMPA), [Score=122, Expect=1e-29]} {Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [Score=126, Expect=4e-31]} {RNA1509_11251} {RNA1310_37359} {RNA815_2128.1} |
| 9. | MligTC455_29545 | 2037 | 42.43 | Mlig455_062263 | Neo: - Age: - |
TM9SF3 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_062263 {REF} {Length: 7019} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=509.8]} {Human: ENSG00000077147, TM9SF3, transmembrane 9 superfamily member 3, [RH, Score=828, Expect=0.0]} {Mouse: ENSMUSG00000025016, Tm9sf3, transmembrane 9 superfamily member 3, [RH, Score=827, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [RH, Score=794, Expect=0.0]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [RH, Score=786, Expect=0.0]} {Smed: dd_Smed_v6_2737_0_1, dd_Smed_v6_2737_0_1, [RH, Score=825, Expect=0.0]} {RNA1509_28068, RNA1509_3514, RNA1509_54663} {RNA1310_11216, RNA1509_28068, RNA1509_54663} {RNA1509_28068, RNA1509_54663, RNA815_1966} |
| 10. | MligTC455_29544 | 1846 | 38.47 | Mlig455_025882 | Neo: - Age: logFC(26M/2M)=0.204 Region-enriched R4: 1.015/0.00393 |
TM9SF3 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_025882 {REF} {Length: 4860} {TRANSSPLICED} {Pfam: Endomembrane protein 70 [PF02990.18, score=508.0]} {Human: ENSG00000077147, TM9SF3, transmembrane 9 superfamily member 3, [RH, Score=827, Expect=0.0]} {Mouse: ENSMUSG00000025016, Tm9sf3, transmembrane 9 superfamily member 3, [RH, Score=826, Expect=0.0]} {Dmel: FBgn0035622, TM9SF3, Transmembrane 9 superfamily protein member 3, [RH, Score=793, Expect=0.0]} {Celegans: WBGene00021506, Y41D4A.4, Transmembrane 9 superfamily member, [RH, Score=785, Expect=0.0]} {Smed: dd_Smed_v6_2737_0_1, dd_Smed_v6_2737_0_1, [RH, Score=827, Expect=0.0]} {RNA1509_15942, RNA1509_31690, RNA1509_3514} {RNA1310_11216, RNA1509_15942, RNA1509_31690, RNA1509_3514} {RNA1509_15942, RNA1509_31690, RNA1509_3514, RNA815_1966} |
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