Data search
Results for MligTC455_40009
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40009 | 465 | 9.69 | Mlig455_007292, Mlig455_007306 | Neo: - Age: - Region-enriched R2: 1.847/0.04615 |
C12orf56 | Mlig455_007292 {REF} {Length: 3480} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.8]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.4, Expect=6e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=48.9, Expect=1e-05]} {RNA1509_59782} {RNA1310_13327.1} {RNA815_13535} Mlig455_007306 {REF} {Length: 3500} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.6]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.8, Expect=5e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=49.3, Expect=8e-06]} {RNA1509_56187, RNA1509_59782} {RNA1310_13327.1, RNA1509_56187, RNA1509_59782} {RNA1509_56187, RNA1509_59782, RNA815_13535} |
Cumulative graph for MligTC455_40009
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.669 | 3.557 | 0.61504 | 1.00000 | |
| RegionR2 | 1.847 | 3.557 | 0.00301 | 0.04615 | |
| RegionR3 | 0.733 | 3.557 | 0.14670 | 0.65134 | |
| RegionR4 | -1.246 | 3.557 | 0.03614 | 0.15483 | |
| RegionR5 | -0.924 | 3.557 | 0.06896 | 0.23562 | |
| RegionR6 | 1.167 | 3.557 | 0.02011 | 0.25552 | |
| RegionR7 | 0.614 | 3.557 | 0.29239 | 0.92685 | |
| RegionR8 | -1.521 | 3.557 | 0.11453 | 0.62583 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.713 | 3.557 | 0.24952 | 0.96639 | |
| RegenerationR2 | -0.041 | 3.557 | 0.93765 | 1.00000 | |
| RegenerationR3 | 0.196 | 3.557 | 0.73222 | 0.95858 | |
| RegenerationR4 | 0.811 | 3.557 | 0.19297 | 0.63772 | |
| RegenerationR5 | 0.491 | 3.557 | 0.40251 | 0.80049 | |
| RegenerationR6 | -0.749 | 3.557 | 0.20657 | 0.54901 | |
| RegenerationBL | 0.835 | 3.557 | 0.21253 | 0.55671 | |
| RegenerationTP | -1.367 | 3.557 | 0.20986 | 0.65197 |
Genes with expression patterns similar to MligTC455_40009
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40009 | 465 | 9.69 | Mlig455_007292, Mlig455_007306 | Neo: - Age: - Region-enriched R2: 1.847/0.04615 |
C12orf56 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007292 {REF} {Length: 3480} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.8]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.4, Expect=6e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=48.9, Expect=1e-05]} {RNA1509_59782} {RNA1310_13327.1} {RNA815_13535} Mlig455_007306 {REF} {Length: 3500} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=57.6]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=57.8, Expect=5e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=49.3, Expect=8e-06]} {RNA1509_56187, RNA1509_59782} {RNA1310_13327.1, RNA1509_56187, RNA1509_59782} {RNA1509_56187, RNA1509_59782, RNA815_13535} |
| 2. | MligTC455_40010 | 229 | 4.77 | Mlig455_068323 | Neo: - |
C12orf56 | 5.907 | 0.998 | 1.000 | 0.998 | 0.979 | 0.932 | 1.000 | Mlig455_068323 {REF} {Length: 3192} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF4551) [PF15087.8, score=58.3]} {Human: ENSG00000185306, C12orf56, chromosome 12 open reading frame 56, [Score=56.6, Expect=1e-07]} {Mouse: ENSMUSG00000047642, D930020B18Rik, RIKEN cDNA D930020B18 gene, [Score=58.2, Expect=4e-08]} {Smed: dd_Smed_v6_16356_0_1, dd_Smed_v6_16356_0_1, [Score=49.3, Expect=7e-06]} {RNA1509_59782} {RNA1310_13327.1} {RNA815_13535} |
| 3. | MligTC455_34970 | 764 | 15.92 | Mlig455_046892 | Neo: - Age: Down-Up-Up Regeneration-upregulated BL: 1.959 Regeneration-enriched BL: 1.959 |
GFI1 | 1.77 | - | 0.819 | - | - | 0.951 | - | Mlig455_046892 {REF} {Length: 2890} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=37.3]; C2H2-type zinc finger [PF13894.8, score=29.8]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=74.7, Expect=9e-14]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=74.7, Expect=2e-14]; ENSG00000171448, ZBTB26, zinc finger and BTB domain containing 26, [Score=73.6, Expect=2e-13]; ENSG00000081386, ZNF510, zinc finger protein 510, [Score=71.6, Expect=1e-12]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=75.9, Expect=3e-14]; ENSMUSG00000064194, Zfp936, zinc finger protein 936, [Score=75.1, Expect=4e-14]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=75.1, Expect=3e-14]; ENSMUSG00000050714, Zbtb26, zinc finger and BTB domain containing 26, [Score=74.7, Expect=6e-14]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=83.2, Expect=1e-16]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.5, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=178, Expect=4e-50]} {RNA1509_13553, RNA1509_53524} {RNA1310_12376, RNA1509_13553, RNA1509_53524} {RNA1509_13553, RNA1509_53524, RNA815_12046} |
| 4. | MligTC455_30924 | 210 | 4.37 | Mlig455_026696 | Neo: Irradiation Age: Up-Down-Down |
PACS2 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_026696 {REF} {Length: 5099} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=216.4]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [RH, Score=149, Expect=4e-36]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=144, Expect=1e-34]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [Score=133, Expect=3e-31]} {Celegans: WBGene00044077, tag-232, [Score=80.5, Expect=1e-15]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [RH, Score=141, Expect=3e-34]} {RNA1509_39289} {RNA1310_4400.1} {RNA815_4629.1} |
| 5. | MligTC455_23597 | 83 | 1.72 | Mlig455_024853 | Neo: - Age: - |
FAT4 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_024853 {REF} {Length: 3518} {Pfam: Cadherin domain [PF00028.19, score=116.6]; Cadherin-like [PF16184.7, score=29.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=127, Expect=4e-29]; ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=124, Expect=5e-28]; ENSG00000120327, PCDHB14, protocadherin beta 14, [Score=122, Expect=5e-28]; ENSG00000120322, PCDHB8, protocadherin beta 8, [Score=121, Expect=2e-27]} {Mouse: ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=137, Expect=2e-32]} {Dmel: FBgn0038439, Cad89D, Cadherin 89D, [Score=164, Expect=7e-41]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=122, Expect=5e-28]} {Smed: dd_Smed_v6_14317_0_1, dd_Smed_v6_14317_0_1, [Score=117, Expect=1e-26]} {RNA1509_18837} {RNA1310_7055.1} {RNA815_6037} |
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