TomoSeq data search

Data search

Results for MligTC455_35131

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35131	25	0.52	Mlig455_046647	Neo: Irradiation Age: -	TOP1	Mlig455_046647 {REF} {Length: 2743} {Pfam: Eukaryotic DNA topoisomerase I, catalytic core [PF01028.22, score=324.6]; Eukaryotic DNA topoisomerase I, DNA binding fragment [PF02919.17, score=323.2]; C-terminal topoisomerase domain [PF14370.8, score=107.0]} {Human: ENSG00000198900, TOP1, DNA topoisomerase I, [RH, Score=792, Expect=0.0]; ENSG00000184428, TOP1MT, DNA topoisomerase I mitochondrial, [RH, Score=759, Expect=0.0]} {Mouse: ENSMUSG00000070544, Top1, topoisomerase (DNA) I, [RH, Score=787, Expect=0.0]} {Dmel: FBgn0004924, Top1, Topoisomerase 1, [RH, Score=761, Expect=0.0]} {Celegans: WBGene00006595, top-1, DNA topoisomerase 1, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_2421_0_1, dd_Smed_v6_2421_0_1, [RH, Score=748, Expect=0.0]} {RNA1509_16904, RNA1509_3610, RNA1509_47756} {RNA1310_7908.1, RNA1509_16904, RNA1509_47756} {RNA1509_16904, RNA1509_47756, RNA815_2481.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35131

0.52

Mlig455_046647

Neo: Irradiation

Age: -

TOP1

Mlig455_046647 {REF} {Length: 2743} {Pfam: Eukaryotic DNA topoisomerase I, catalytic core [PF01028.22, score=324.6]; Eukaryotic DNA topoisomerase I, DNA binding fragment [PF02919.17, score=323.2]; C-terminal topoisomerase domain [PF14370.8, score=107.0]} {Human: ENSG00000198900, TOP1, DNA topoisomerase I, [RH, Score=792, Expect=0.0]; ENSG00000184428, TOP1MT, DNA topoisomerase I mitochondrial, [RH, Score=759, Expect=0.0]} {Mouse: ENSMUSG00000070544, Top1, topoisomerase (DNA) I, [RH, Score=787, Expect=0.0]} {Dmel: FBgn0004924, Top1, Topoisomerase 1, [RH, Score=761, Expect=0.0]} {Celegans: WBGene00006595, top-1, DNA topoisomerase 1, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_2421_0_1, dd_Smed_v6_2421_0_1, [RH, Score=748, Expect=0.0]} {RNA1509_16904, RNA1509_3610, RNA1509_47756} {RNA1310_7908.1, RNA1509_16904, RNA1509_47756} {RNA1509_16904, RNA1509_47756, RNA815_2481.2}

Cumulative graph for MligTC455_35131

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.641	0.894	0.99994	1.00000
RegionR2	-3.007	0.894	0.99986	1.00000
RegionR3	-0.623	0.894	0.99991	1.00000
RegionR4	2.878	0.894	0.99988	1.00000
RegionR5	0.434	0.894	0.99998	1.00000
RegionR6	-0.932	0.894	0.99992	1.00000
RegionR7	-0.52	0.894	0.99998	1.00000
RegionR8	0.129	0.894	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.889	0.894	0.99997	1.00000
RegenerationR2	3.198	0.894	0.02693	0.27151
RegenerationR3	1.04	0.894	0.45847	0.83696
RegenerationR4	0.505	0.894	0.44006	0.83699
RegenerationR5	2.253	0.894	0.17743	0.60676
RegenerationR6	3.236	0.894	0.15928	0.48712
RegenerationBL	3.599	0.894	0.11616	0.40355
RegenerationTP	-1.68	0.894	0.99988	1.00000

Genes with expression patterns similar to MligTC455_35131

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35131	25	0.52	Mlig455_046647	Neo: Irradiation Age: -	TOP1	3	-	-	-	1.000	1.000	1.000	Mlig455_046647 {REF} {Length: 2743} {Pfam: Eukaryotic DNA topoisomerase I, catalytic core [PF01028.22, score=324.6]; Eukaryotic DNA topoisomerase I, DNA binding fragment [PF02919.17, score=323.2]; C-terminal topoisomerase domain [PF14370.8, score=107.0]} {Human: ENSG00000198900, TOP1, DNA topoisomerase I, [RH, Score=792, Expect=0.0]; ENSG00000184428, TOP1MT, DNA topoisomerase I mitochondrial, [RH, Score=759, Expect=0.0]} {Mouse: ENSMUSG00000070544, Top1, topoisomerase (DNA) I, [RH, Score=787, Expect=0.0]} {Dmel: FBgn0004924, Top1, Topoisomerase 1, [RH, Score=761, Expect=0.0]} {Celegans: WBGene00006595, top-1, DNA topoisomerase 1, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_2421_0_1, dd_Smed_v6_2421_0_1, [RH, Score=748, Expect=0.0]} {RNA1509_16904, RNA1509_3610, RNA1509_47756} {RNA1310_7908.1, RNA1509_16904, RNA1509_47756} {RNA1509_16904, RNA1509_47756, RNA815_2481.2}
2.	MligTC455_17759	25	0.53	Mlig455_032815	Neo: - Age: Up-Up-Down		0.972	-	-	-	-	-	0.972	Mlig455_032815 {REF} {Length: 1891} {Pfam: Protein of unknown function (DUF2673) [PF10880.10, score=53.5]} {RNA1509_57582} {RNA1310_49538.1, RNA1509_57582}
3.	MligTC455_24864	45	0.94	Mlig455_036650, Mlig455_036676	Neo: Germline Age: -		0.961	-	-	-	-	-	0.961	Mlig455_036650 {REF} {Length: 7160} {RNA1310_56607} Mlig455_036676 {REF} {Length: 4934} {RNA1509_25556} {RNA1310_56607} {RNA815_49065}
4.	MligTC455_42928	139	2.9	Mlig455_000600	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.462	MPV17	0.957	-	-	-	0.957	-	-	Mlig455_000600 {REF} {Length: 1874} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=65.9]} {Human: ENSG00000115204, MPV17, MPV17, mitochondrial inner membrane protein, [RH, Score=120, Expect=3e-34]} {Mouse: ENSMUSG00000107283, Mpv17, MpV17 mitochondrial inner membrane protein, [RH, Score=123, Expect=2e-35]} {Dmel: FBgn0039930, CG11077, [RH, Score=74.7, Expect=9e-17]} {Celegans: WBGene00011826, T18D3.9, Mpv17-like protein, [RH, Score=83.2, Expect=5e-20]} {Smed: dd_Smed_v6_13953_0_1, dd_Smed_v6_13953_0_1, [RH, Score=127, Expect=5e-37]} {RNA1509_35894, RNA1509_57658} {RNA1310_33755.1, RNA1509_57658} {RNA1509_57658, RNA815_15799}