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Results for MligTC455_42928

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42928 139 2.90 Mlig455_000600

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.462

 MPV17 Mlig455_000600 {REF} {Length: 1874} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=65.9]} {Human: ENSG00000115204, MPV17, MPV17, mitochondrial inner membrane protein, [RH, Score=120, Expect=3e-34]} {Mouse: ENSMUSG00000107283, Mpv17, MpV17 mitochondrial inner membrane protein, [RH, Score=123, Expect=2e-35]} {Dmel: FBgn0039930, CG11077, [RH, Score=74.7, Expect=9e-17]} {Celegans: WBGene00011826, T18D3.9, Mpv17-like protein, [RH, Score=83.2, Expect=5e-20]} {Smed: dd_Smed_v6_13953_0_1, dd_Smed_v6_13953_0_1, [RH, Score=127, Expect=5e-37]} {RNA1509_35894, RNA1509_57658} {RNA1310_33755.1, RNA1509_57658} {RNA1509_57658, RNA815_15799}

Cumulative graph for MligTC455_42928

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.247 2.443 0.99965 1.00000
RegionR2 0.07 2.443 0.75467 1.00000
RegionR3 1.872 2.443 0.08653 0.51998
RegionR4 2.331 2.443 0.08462 0.27515
RegionR5 2.147 2.443 0.02881 0.12598
RegionR6 1.694 2.443 0.14742 0.68507
RegionR7 0.624 2.443 0.58989 1.00000
RegionR8 -5.49 2.443 0.99979 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.902 2.443 0.99987 1.00000
RegenerationR2 1.052 2.443 0.24769 0.69488
RegenerationR3 -0.51 2.443 0.60452 0.90979
RegenerationR4 0.061 2.443 0.94928 1.00000
RegenerationR5 -1.03 2.443 0.22622 0.66007
RegenerationR6 -0.003 2.443 0.97379 1.00000
RegenerationBL 3.655 2.443 0.01144 0.10897
RegenerationTP 1.826 2.443 0.44109 0.86063


Genes with expression patterns similar to MligTC455_42928

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42928 139 2.9 Mlig455_000600

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.462

 MPV17 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_000600 {REF} {Length: 1874} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=65.9]} {Human: ENSG00000115204, MPV17, MPV17, mitochondrial inner membrane protein, [RH, Score=120, Expect=3e-34]} {Mouse: ENSMUSG00000107283, Mpv17, MpV17 mitochondrial inner membrane protein, [RH, Score=123, Expect=2e-35]} {Dmel: FBgn0039930, CG11077, [RH, Score=74.7, Expect=9e-17]} {Celegans: WBGene00011826, T18D3.9, Mpv17-like protein, [RH, Score=83.2, Expect=5e-20]} {Smed: dd_Smed_v6_13953_0_1, dd_Smed_v6_13953_0_1, [RH, Score=127, Expect=5e-37]} {RNA1509_35894, RNA1509_57658} {RNA1310_33755.1, RNA1509_57658} {RNA1509_57658, RNA815_15799}
2. MligTC455_15636 8 0.16 Mlig455_041947

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_041947 {REF} {Length: 288} {NoTransDecoderORF} {RNA1509_57052} {RNA1310_14219.2} {RNA815_425.1}
3. MligTC455_46659 223 4.65 Mlig455_029116

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.707/0.02526

 VPS11 0.97 - - - - - 0.970 Mlig455_029116 {REF} {Length: 4870} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=636, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=79.7, Expect=1e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=273, Expect=1e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=187, Expect=6e-51]} {RNA1509_11437, RNA1509_41261} {RNA1310_3770.1, RNA1509_41261} {RNA1509_41261, RNA815_1127}
4. MligTC455_46658 239 4.97 Mlig455_029096

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.582/0.02641

 VPS11 0.959 - - - - - 0.959 Mlig455_029096 {REF} {Length: 2086} {Pfam: Zinc-finger [PF17122.7, score=21.2]; RING-type zinc-finger [PF13445.8, score=20.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=19.8]; Ring finger domain [PF13639.8, score=19.1]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=87.4, Expect=3e-19]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=87.0, Expect=3e-19]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=59.7, Expect=4e-10]} {Smed: dd_Smed_v6_6678_0_1, dd_Smed_v6_6678_0_1, [Score=64.7, Expect=5e-12]} {RNA1509_41261} {RNA1310_3770.1} {RNA815_1127}
5. MligTC455_35131 25 0.52 Mlig455_046647

Neo: Irradiation

Age: -

 TOP1 0.957 - - - 0.957 - - Mlig455_046647 {REF} {Length: 2743} {Pfam: Eukaryotic DNA topoisomerase I, catalytic core [PF01028.22, score=324.6]; Eukaryotic DNA topoisomerase I, DNA binding fragment [PF02919.17, score=323.2]; C-terminal topoisomerase domain [PF14370.8, score=107.0]} {Human: ENSG00000198900, TOP1, DNA topoisomerase I, [RH, Score=792, Expect=0.0]; ENSG00000184428, TOP1MT, DNA topoisomerase I mitochondrial, [RH, Score=759, Expect=0.0]} {Mouse: ENSMUSG00000070544, Top1, topoisomerase (DNA) I, [RH, Score=787, Expect=0.0]} {Dmel: FBgn0004924, Top1, Topoisomerase 1, [RH, Score=761, Expect=0.0]} {Celegans: WBGene00006595, top-1, DNA topoisomerase 1, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_2421_0_1, dd_Smed_v6_2421_0_1, [RH, Score=748, Expect=0.0]} {RNA1509_16904, RNA1509_3610, RNA1509_47756} {RNA1310_7908.1, RNA1509_16904, RNA1509_47756} {RNA1509_16904, RNA1509_47756, RNA815_2481.2}
6. MligTC455_55355 12 0.25 Mlig455_029780

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_029780 {REF} {Length: 209} {NoTransDecoderORF} {RNA1509_4917} {RNA1310_700} {RNA815_15747}

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