Data search
Results for MligTC455_35149
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35149 | 210 | 4.38 | Mlig455_045939 | Neo: - Age: logFC(26M/2M)=0.300 |
WDR53 | Mlig455_045939 {REF} {Length: 3083} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=56.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.5]} {Human: ENSG00000185798, WDR53, WD repeat domain 53, [Score=106, Expect=5e-25]} {Mouse: ENSMUSG00000022787, Wdr53, WD repeat domain 53, [Score=95.5, Expect=3e-21]} {Smed: dd_Smed_v6_13588_0_2, dd_Smed_v6_13588_0_2, [RH, Score=74.7, Expect=8e-15]} {RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422} {RNA1310_5097, RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422} {RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422, RNA815_8214.1} |
Cumulative graph for MligTC455_35149
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.322 | 2.704 | 0.12404 | 0.71803 | |
| RegionR2 | 1.761 | 2.704 | 0.09068 | 0.36931 | |
| RegionR3 | -0.004 | 2.704 | 0.86452 | 1.00000 | |
| RegionR4 | 1.263 | 2.704 | 0.20039 | 0.47987 | |
| RegionR5 | 0.27 | 2.704 | 0.74693 | 1.00000 | |
| RegionR6 | 2.091 | 2.704 | 0.01398 | 0.20582 | |
| RegionR7 | -0.26 | 2.704 | 0.92569 | 1.00000 | |
| RegionR8 | 1.201 | 2.704 | 0.36582 | 0.99980 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.045 | 2.704 | 0.99998 | 1.00000 | |
| RegenerationR2 | 0.549 | 2.704 | 0.37269 | 0.79739 | |
| RegenerationR3 | 1.894 | 2.704 | 0.01759 | 0.24190 | |
| RegenerationR4 | 0.248 | 2.704 | 0.74329 | 0.96855 | |
| RegenerationR5 | 1.615 | 2.704 | 0.02370 | 0.26367 | |
| RegenerationR6 | 0.375 | 2.704 | 0.58349 | 0.85963 | |
| RegenerationBL | -0.057 | 2.704 | 0.95903 | 1.00000 | |
| RegenerationTP | 1.699 | 2.704 | 0.06520 | 0.41156 |
Genes with expression patterns similar to MligTC455_35149
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35149 | 210 | 4.38 | Mlig455_045939 | Neo: - Age: logFC(26M/2M)=0.300 |
WDR53 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045939 {REF} {Length: 3083} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=56.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.5]} {Human: ENSG00000185798, WDR53, WD repeat domain 53, [Score=106, Expect=5e-25]} {Mouse: ENSMUSG00000022787, Wdr53, WD repeat domain 53, [Score=95.5, Expect=3e-21]} {Smed: dd_Smed_v6_13588_0_2, dd_Smed_v6_13588_0_2, [RH, Score=74.7, Expect=8e-15]} {RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422} {RNA1310_5097, RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422} {RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422, RNA815_8214.1} |
| 2. | MligTC455_29761 | 117 | 2.44 | Mlig455_013621 | Neo: - Age: - Region-enriched R4: 3.464/0.00365 |
BEST1 | 1.836 | 0.886 | - | - | - | - | 0.950 | Mlig455_013621 {REF} {Length: 8372} {TRANSSPLICED} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.0]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=124, Expect=5e-30]; ENSG00000127325, BEST3, bestrophin 3, [Score=118, Expect=1e-27]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=1e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=228, Expect=3e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=173, Expect=2e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=355, Expect=8e-118]} {RNA1509_54677} {RNA1310_17634} {RNA815_11997} |
| 3. | MligTC455_22568 | 756 | 15.74 | Mlig455_006710 | Neo: - Age: Up-Down-Down |
TRPM3 | 1.727 | - | - | 0.775 | - | - | 0.952 | Mlig455_006710 {REF} {Length: 6137} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=107.2]; Ankyrin repeats (3 copies) [PF12796.9, score=92.9]; Ankyrin repeat [PF00023.32, score=63.3]; Ankyrin repeats (many copies) [PF13857.8, score=59.6]; Ankyrin repeat [PF13606.8, score=58.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=111, Expect=7e-24]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=111, Expect=5e-24]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=105, Expect=3e-22]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=64.3, Expect=6e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=120, Expect=3e-27]} {RNA1509_12598} {RNA1310_943.1} {RNA815_2516.1} |
| 4. | MligTC455_31950 | 515 | 10.73 | Mlig455_034849 | Neo: - Age: - |
KCTD1 | 0.978 | - | - | - | - | 0.978 | - | Mlig455_034849 {REF} {Length: 3140} {TRANSSPLICED} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=68.2, Expect=9e-12]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=68.6, Expect=4e-12]} {RNA1509_44313} {RNA1310_16403.1} {RNA815_10559.1} |
| 5. | MligTC455_21673 | 316 | 6.58 | Mlig455_013782, Mlig455_013911 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_013782 {REF} {Length: 3170} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=47.1]} {Dmel: FBgn0031745, rau, [RH, Score=72.8, Expect=4e-13]} {RNA1509_28308} {RNA1310_8072} {RNA815_15473} Mlig455_013911 {REF} {Length: 3190} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=46.0]} {Dmel: FBgn0031745, rau, [RH, Score=76.3, Expect=3e-14]} {RNA1509_28308} {RNA1310_8072, RNA1509_28308} {RNA1509_28308, RNA815_15473} |
|
| 6. | MligTC455_23083 | 766 | 15.95 | Mlig455_024192 | Neo: - Age: - |
FAT4 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_024192 {REF} {Length: 8456} {Pfam: Cadherin domain [PF00028.19, score=728.8]; Cadherin-like [PF16184.7, score=114.5]; Cadherin-like [PF08266.14, score=28.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=540, Expect=2e-154]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=514, Expect=2e-146]} {Dmel: FBgn0284247, ds, dachsous, [Score=460, Expect=4e-130]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=276, Expect=5e-74]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=281, Expect=2e-75]} {RNA1509_848} {RNA1310_296} {RNA815_105} |
| 7. | MligTC455_13946 | 148 | 3.08 | Mlig455_008098 | Neo: - Age: Down-Up-Down |
SYT14 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_008098 {REF} {Length: 3436} {Pfam: C2 domain [PF00168.32, score=35.4]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=92.8, Expect=5e-19]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=96.3, Expect=5e-20]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=86.7, Expect=3e-17]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [Score=104, Expect=7e-24]} {RNA1509_12596} {RNA1310_670.1} {RNA815_7240.1} |
| 8. | MligTC455_22994 | 337 | 7.02 | Mlig455_008846 | Neo: - Age: Down-Up-Up |
0.957 | - | - | - | - | - | 0.957 | Mlig455_008846 {REF} {Length: 1548} {Pfam: SPATIAL [PF15256.8, score=72.1]} {Mouse: ENSMUSG00000020096, Tbata, thymus, brain and testes associated, [Score=48.5, Expect=9e-06]} {Smed: dd_Smed_v6_4229_0_1, dd_Smed_v6_4229_0_1, [RH, Score=62.0, Expect=2e-10]} {RNA1509_46671} {RNA1310_22194.1, RNA1509_46671} {RNA1509_46671, RNA815_29404} | |
| 9. | MligTC455_50350 | 115 | 2.39 | Mlig455_042587 | Neo: - Age: Down-Up-Up |
RETSAT | 0.957 | 0.957 | - | - | - | - | - | Mlig455_042587 {REF} {Length: 3166} {TRANSSPLICED} {Pfam: GMC oxidoreductase [PF00732.21, score=21.0]} {Human: ENSG00000042445, RETSAT, retinol saturase, [Score=183, Expect=4e-51]} {Mouse: ENSMUSG00000056666, Retsat, retinol saturase (all trans retinol 13,14 reductase), [Score=178, Expect=3e-49]} {RNA1509_39613} {RNA1310_6975.1} {RNA815_3383.1} |
| 10. | MligTC455_19441 | 305 | 6.35 | Mlig455_001985 | Neo: - Age: logFC(26M/2M)=-0.555 Region-enriched R2: 2.029/0.00606 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_001985 {REF} {Length: 2497} {RNA1509_40470} {RNA1310_22476.3, RNA1509_40470} {RNA1509_40470, RNA815_16128} | |
| 11. | MligTC455_49166 | 396 | 8.25 | Mlig455_018560 | Neo: - Age: - |
SLC6A1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_018560 {REF} {Length: 3712} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=536.5]} {Human: ENSG00000157103, SLC6A1, solute carrier family 6 member 1, [Score=405, Expect=2e-133]; ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=400, Expect=5e-129]; ENSG00000010379, SLC6A13, solute carrier family 6 member 13, [Score=400, Expect=4e-131]; ENSG00000132164, SLC6A11, solute carrier family 6 member 11, [Score=386, Expect=1e-125]} {Mouse: ENSMUSG00000030108, Slc6a13, solute carrier family 6 (neurotransmitter transporter, GABA), member 13, [Score=405, Expect=2e-133]; ENSMUSG00000030310, Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1, [Score=402, Expect=2e-132]; ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=399, Expect=1e-128]; ENSMUSG00000030307, Slc6a11, solute carrier family 6 (neurotransmitter transporter, GABA), member 11, [Score=388, Expect=2e-126]; ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=385, Expect=2e-125]} {Dmel: FBgn0034911, CG5549, [Score=410, Expect=3e-129]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=371, Expect=2e-120]} {Smed: dd_Smed_v6_8727_0_1, dd_Smed_v6_8727_0_1, [Score=397, Expect=4e-131]} {RNA1509_6518} {RNA1310_2695.1, RNA1509_6518} {RNA1509_6518, RNA815_2483.1} |
| 12. | MligTC455_39102 | 413 | 8.6 | Mlig455_061920 | Neo: - Age: - Regeneration-downregulated BL: -3.081 Regeneration-depleted BL: -3.081 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_061920 {REF} {Length: 2570} {Pfam: EF hand [PF00036.34, score=39.3]; EF-hand domain [PF13405.8, score=29.5]; EF-hand domain pair [PF13499.8, score=24.5]; EF hand [PF13202.8, score=24.3]; EF-hand domain pair [PF13833.8, score=23.4]} {Celegans: WBGene00000287, cal-3, CALmodulin related genes, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_13677_0_1, dd_Smed_v6_13677_0_1, [Score=151, Expect=7e-45]} {RNA1509_25282} {RNA1310_29885.1} {RNA815_14774.1} |
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