TomoSeq data search

Data search

Results for MligTC455_49166

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49166	396	8.25	Mlig455_018560	Neo: - Age: -	SLC6A1	Mlig455_018560 {REF} {Length: 3712} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=536.5]} {Human: ENSG00000157103, SLC6A1, solute carrier family 6 member 1, [Score=405, Expect=2e-133]; ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=400, Expect=5e-129]; ENSG00000010379, SLC6A13, solute carrier family 6 member 13, [Score=400, Expect=4e-131]; ENSG00000132164, SLC6A11, solute carrier family 6 member 11, [Score=386, Expect=1e-125]} {Mouse: ENSMUSG00000030108, Slc6a13, solute carrier family 6 (neurotransmitter transporter, GABA), member 13, [Score=405, Expect=2e-133]; ENSMUSG00000030310, Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1, [Score=402, Expect=2e-132]; ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=399, Expect=1e-128]; ENSMUSG00000030307, Slc6a11, solute carrier family 6 (neurotransmitter transporter, GABA), member 11, [Score=388, Expect=2e-126]; ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=385, Expect=2e-125]} {Dmel: FBgn0034911, CG5549, [Score=410, Expect=3e-129]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=371, Expect=2e-120]} {Smed: dd_Smed_v6_8727_0_1, dd_Smed_v6_8727_0_1, [Score=397, Expect=4e-131]} {RNA1509_6518} {RNA1310_2695.1, RNA1509_6518} {RNA1509_6518, RNA815_2483.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49166

396

8.25

Mlig455_018560

Neo: -

Age: -

SLC6A1

Mlig455_018560 {REF} {Length: 3712} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=536.5]} {Human: ENSG00000157103, SLC6A1, solute carrier family 6 member 1, [Score=405, Expect=2e-133]; ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=400, Expect=5e-129]; ENSG00000010379, SLC6A13, solute carrier family 6 member 13, [Score=400, Expect=4e-131]; ENSG00000132164, SLC6A11, solute carrier family 6 member 11, [Score=386, Expect=1e-125]} {Mouse: ENSMUSG00000030108, Slc6a13, solute carrier family 6 (neurotransmitter transporter, GABA), member 13, [Score=405, Expect=2e-133]; ENSMUSG00000030310, Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1, [Score=402, Expect=2e-132]; ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=399, Expect=1e-128]; ENSMUSG00000030307, Slc6a11, solute carrier family 6 (neurotransmitter transporter, GABA), member 11, [Score=388, Expect=2e-126]; ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=385, Expect=2e-125]} {Dmel: FBgn0034911, CG5549, [Score=410, Expect=3e-129]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=371, Expect=2e-120]} {Smed: dd_Smed_v6_8727_0_1, dd_Smed_v6_8727_0_1, [Score=397, Expect=4e-131]} {RNA1509_6518} {RNA1310_2695.1, RNA1509_6518} {RNA1509_6518, RNA815_2483.1}

Cumulative graph for MligTC455_49166

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.446	3.498	0.09630	0.65935
RegionR2	1.332	3.498	0.17564	0.52393
RegionR3	0.526	3.498	0.57415	1.00000
RegionR4	2.011	3.498	0.02299	0.11247
RegionR5	0.818	3.498	0.36529	0.71778
RegionR6	0.777	3.498	0.40551	0.97527
RegionR7	0.065	3.498	0.83235	1.00000
RegionR8	0.916	3.498	0.39281	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.213	3.498	0.99996	1.00000
RegenerationR2	0.211	3.498	0.72570	0.96428
RegenerationR3	0.385	3.498	0.58967	0.90359
RegenerationR4	-0.315	3.498	0.64895	0.93288
RegenerationR5	0.569	3.498	0.39539	0.79511
RegenerationR6	0.047	3.498	0.95116	1.00000
RegenerationBL	-0.219	3.498	0.78532	1.00000
RegenerationTP	0.535	3.498	0.49874	0.89958

Genes with expression patterns similar to MligTC455_49166

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49166	396	8.25	Mlig455_018560	Neo: - Age: -	SLC6A1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018560 {REF} {Length: 3712} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=536.5]} {Human: ENSG00000157103, SLC6A1, solute carrier family 6 member 1, [Score=405, Expect=2e-133]; ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=400, Expect=5e-129]; ENSG00000010379, SLC6A13, solute carrier family 6 member 13, [Score=400, Expect=4e-131]; ENSG00000132164, SLC6A11, solute carrier family 6 member 11, [Score=386, Expect=1e-125]} {Mouse: ENSMUSG00000030108, Slc6a13, solute carrier family 6 (neurotransmitter transporter, GABA), member 13, [Score=405, Expect=2e-133]; ENSMUSG00000030310, Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1, [Score=402, Expect=2e-132]; ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=399, Expect=1e-128]; ENSMUSG00000030307, Slc6a11, solute carrier family 6 (neurotransmitter transporter, GABA), member 11, [Score=388, Expect=2e-126]; ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=385, Expect=2e-125]} {Dmel: FBgn0034911, CG5549, [Score=410, Expect=3e-129]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=371, Expect=2e-120]} {Smed: dd_Smed_v6_8727_0_1, dd_Smed_v6_8727_0_1, [Score=397, Expect=4e-131]} {RNA1509_6518} {RNA1310_2695.1, RNA1509_6518} {RNA1509_6518, RNA815_2483.1}
2.	MligTC455_28521	992	20.67	Mlig455_046502	Neo: - Age: -		1.663	-	-	0.713	-	-	0.950	Mlig455_046502 {REF} {Length: 2752} {Dmel: FBgn0031174, CG1486, [Score=81.3, Expect=3e-17]} {Celegans: WBGene00007593, C14H10.3, [Score=87.4, Expect=3e-19]} {Smed: dd_Smed_v6_8663_0_1, dd_Smed_v6_8663_0_1, [Score=84.0, Expect=3e-18]} {RNA1509_19144} {RNA1310_30735} {RNA815_1517}
3.	MligTC455_45642	853	17.77	Mlig455_003010, Mlig455_012136, Mlig455_067594, Mlig455_069880	Neo: - Age: -	ZNF616	0.961	-	-	0.961	-	-	-	Mlig455_003010 {REF} {Length: 1400} {RNA1509_51785} {RNA1310_51119} {RNA815_58311} Mlig455_012136 {REF} {Length: 818} {NoTransDecoderORF} {RNA1509_51785} {RNA1310_51119} {RNA815_58311} Mlig455_067594 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=57.5]; Zinc-finger double domain [PF13465.8, score=43.4]; C2H2-type zinc finger [PF13894.8, score=39.0]; Zinc-finger of C2H2 type [PF12874.9, score=30.1]; C2H2-type zinc finger [PF13912.8, score=23.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.3]} {Human: ENSG00000204611, ZNF616, zinc finger protein 616, [Score=94.4, Expect=4e-22]; ENSG00000237440, ZNF737, zinc finger protein 737, [Score=91.3, Expect=5e-21]} {Mouse: ENSMUSG00000020420, Zfp607a, zinc finger protein 607A, [Score=102, Expect=6e-25]} {Dmel: FBgn0027339, jim, [Score=83.2, Expect=2e-18]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=79.3, Expect=3e-18]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [Score=70.5, Expect=9e-15]} {RNA1509_23728} {RNA1310_37967} {RNA815_4812} Mlig455_069880 {REF} {Length: 1249} {NoTransDecoderORF} {RNA1509_51785} {RNA1310_51119, RNA1509_51785} {RNA1509_51785, RNA815_58311}
4.	MligTC455_19015	270	5.62	Mlig455_035264	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_035264 {REF} {Length: 770} {NoTransDecoderORF} {RNA1310_96225} {RNA815_57553}
5.	MligTC455_35149	210	4.38	Mlig455_045939	Neo: - Age: logFC(26M/2M)=0.300	WDR53	0.955	-	-	-	-	-	0.955	Mlig455_045939 {REF} {Length: 3083} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=56.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=27.5]} {Human: ENSG00000185798, WDR53, WD repeat domain 53, [Score=106, Expect=5e-25]} {Mouse: ENSMUSG00000022787, Wdr53, WD repeat domain 53, [Score=95.5, Expect=3e-21]} {Smed: dd_Smed_v6_13588_0_2, dd_Smed_v6_13588_0_2, [RH, Score=74.7, Expect=8e-15]} {RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422} {RNA1310_5097, RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422} {RNA1509_13288, RNA1509_39061, RNA1509_40994, RNA1509_44470, RNA1509_59422, RNA815_8214.1}